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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 3001 - 3025 of 41895

  1. Penicillin resistance in bovine Staphylococcus aureus: Genomic evaluation of the discrepancy between phenotypic and molecular test methods

    • Journal of Dairy Science
    • Staphylococcus aureus is a major pathogen in humans and animals. In cattle, it is one of the most important agents of mastitis, causing serious costs in the dairy industry. Early diagnosis and adequate therapy are therefore 2 key factors to deal with the problems caused by this bacterium, and benzylpenicillin (penicillin) is usually the first choice to treat these infections. Unfortunately, penicillin resistance testing in bovine S.

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Functional production of clostridial circularin A in Lactococcus lactis NZ9000 and mutational analysis of its aromatic and cationic residues

    • Frontiers in Microbiology
    • Circular bacteriocins, also known as bacterial head-to-tail cyclized peptides, are a subgroup of ribosomally synthesized and post-translationally modified peptides (RiPPs). Compared with their conventional linear counterparts, circular bacteriocins are highly stable over a broad temperature and pH range, and circularization decreases proteolytic degradation by exopeptidases.

      • Bacterial pathogens
      • Clostridium perfringens
  3. Identification of two novel neutralizing nanobodies against swine hepatitis E virus

    • Frontiers in Microbiology
    • Hepatitis E virus (HEV) is thought to be a zoonotic pathogen that causes serious economic loss and threatens human health. However, there is a lack of efficient antiviral strategies. As a more promising tool for antiviral therapy, nanobodies (also named single-domain antibodies, sdAbs) exhibit higher specificity and affinity than traditional antibodies.

      • Viruses
      • Hepatitis
  4. How to survive pig farming: Mechanism of SCCmec element deletion and metabolic stress adaptation in livestock-associated MRSA

    • Frontiers in Microbiology
    • Previous research on methicillin susceptible Staphylococcus aureus (MSSA) belonging to livestock-associated (LA-) sequence type (ST) 398, isolated from pigs and their local surroundings, indicated that differences between these MSSA and their methicillin resistant predecessors (MRSA) are often limited to the absence of the staphylococcal cassette chromosome mec (SCCmec) and few single nucleotide polymorphisms.

      • Bacterial pathogens
      • Staphylococcus aureus
  5. Plants control the structure of mycorrhizal and pathogenic fungal communities in soil in a 50-year maize monoculture experiment

    • Plant and Soil
    • Aims Saprotrophic soil fungi participate in biomass mineralization, inhibit pathogen development and promote plant growth. Pathogens accumulate in soil and decrease crop yields. The structure of fungal communities is determined mainly by the organic matter content and pH of soil.

      • Chemical contaminants
      • Pesticide residues
  6. How Botulinum Neurotoxin Light Chain A1 Maintains Stable Association with the Intracellular Neuronal Plasma Membrane

    • Toxins
    • Botulinum neurotoxin serotype A (BoNT/A) is the most potent protein toxin for humans and is utilized as a therapy for numerous neurologic diseases. BoNT/A comprises a catalytic Light Chain (LC/A) and a Heavy Chain (HC/A) and includes eight subtypes (BoNT/A1-/A8).

      • Bacterial pathogens
      • Clostridium botulinum
  7. Physiological Characteristics of Putative Enterobacteria Associated with Meat and Fish Available in Southern Brazilian Retail Markets: Antimicrobial Susceptibility, Toxic Metal Tolerance and Expression of Efflux Pumps

    • Antibiotics
    • Multidrug-resistant (MDR) mesophilic facultatively anaerobic Gram-negative rods are a public health issue and their spread from animal-source foods to humans is of concern worldwide.

      • Chemical contaminants
      • Heavy Metals
  8. Screening and Molecular Docking of Bioactive Metabolites of the Red Sea Sponge Callyspongia siphonella as Potential Antimicrobial Agents

    • Antibiotics
    • Marine sponges create a wide range of bioactive secondary metabolites, as documented throughout the year. Several bioactive secondary metabolites were isolated from different members of Callyspongia siphonella species. This study aimed for isolation and structural elucidation of major metabolites in order to investigate their diverse bioactivities such as antimicrobial and anti-biofilm activities.

      • Bacterial pathogens
      • Staphylococcus aureus
  9. Occurrence and antimicrobial susceptibility of Staphylococcus aureus in dairy farms and personnel in selected towns of West Shewa Zone, Oromia, Ethiopia

    • PLOS ONE
    • by Milsan Getu Banu, Endrias Zewdu Geberemedhin Staphylococcus aureus is one of the foodborne disease-causing bacterial pathogens. A cross-sectional study was conducted in selected towns of the West Shewa Zone, Oromia, Ethiopia from December 2020 to April 2021. The objectives of the study were to estimate the occurrence and load of S. aureus in raw cows’ milk, the antimicrobial susceptibility patterns of the S.

      • Bacterial pathogens
      • Staphylococcus aureus
  10. Exploring the potential health and ecological damage of lead–zinc production activities in China: A life cycle assessment perspective

    • Journal of Cleaner Production
    • Lead and zinc are indispensable nonferrous metals in the current industrialized society because of their position as raw materials for various industrial products. However, the massive environmental burden imposed by the activities of the lead–zinc industry will trigger potential social impacts.

      • Chemical contaminants
      • Heavy Metals
  11. Development of QuEChERS-based multiresidue analytical methods to determine pesticides in corn, grapes and alfalfa

    • Food Chemistry
    • Analytical methods based on QuEChERS and liquid chromatography-tandem mass spectrometry were developed for the determination of 42 polar and semi-polar pesticides in three representative vegetable matrices, viz. corn, grapes and alfalfa. A 26-2 fractional factorial experimental design was used to cost-effectively optimize the extraction procedure. The optimal analytical approaches were validated in terms of linearity, sensitivity, trueness, and precision.

      • Chemical contaminants
      • Pesticide residues
  12. Antibacterial and β-amyloid precursor protein-cleaving enzyme 1 inhibitory polyketides from the fungus Aspergillus chevalieri

    • Frontiers in Microbiology
    • One new prenylated benzenoid, (±)-chevalieric acid (1), and four new anthraquinone derivatives, (10S,12S)-, (10S,12R)-, (10R,12S)-, and (10R,12R)-chevalierone (2–5), together with ten previously described compounds (6–15), were isolated from the fungus Aspergillus chevalieri (L. Mangin) Thom and Church. The structures of new compounds were elucidated by extensive 1D and 2D nuclear magnetic resonance (NMR), and HRESIMS spectroscopic analysis.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. In vitro antimicrobial activity and resistance mechanisms of the new generation tetracycline agents, eravacycline, omadacycline, and tigecycline against clinical Staphylococcus aureus isolates

    • Frontiers in Microbiology
    • In this study, we investigated the in vitro activity and resistance mechanisms of the new generation tetracycline agents, namely eravacycline, omadacycline, and tigecycline, against Staphylococcus aureus isolates. A total of 1,017 non-duplicate S. aureus isolates were collected and subjected to susceptibility testing against eravacycline, omadacycline, and tigecycline using the broth microdilution method.

      • Bacterial pathogens
      • Staphylococcus aureus
  14. The involvement of organic acids in soil fertility, plant health and environment sustainability

    • Archives of Microbiology
    • Increasing demand for safe food by an ever-growing human population emphasizes the urgency for increasing crop yields and reducing the losses caused by abiotic and biotic stresses; a partial solution to this problem is to develop a better understanding of plant–microbe interactions. Plant roots continuously release a wide range of compounds including organic acids in root exudates.

      • Chemical contaminants
      • Pesticide residues
  15. The protection effect of rhodionin against methicillin-resistant Staphylococcus aureus-induced pneumonia through sortase A inhibition

    • World Journal of Microbiology and Biotechnology
    • Methicillin-resistant Staphylococcus aureus (MRSA) is a zoonotic antibiotic-resistant pathogen that negatively impacts society from medical, veterinary, and societal standpoints. The search for alternative therapeutic strategies and innovative anti-infective agents is urgently needed. Among the pathogenic mechanisms of Staphylococcus aureus (S.

      • Bacterial pathogens
      • Staphylococcus aureus
  16. Genome Sequence of the Sulfate-Reducing Bacterium Pseudodesulfovibrio portus JCM 14722T

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Pseudodesulfovibrio portus JCM 14722T is a strictly anaerobic, mesophilic sulfate-reducing bacterium isolated from estuarine sediments in Japan. Its draft genome sequence comprises 1 circular chromosome (3,403,863 bp), harboring 3,182 predicted protein- and 60 tRNA-encoding genes, as well as 2 rRNA operons.

      • Bacterial pathogens
      • Vibrio
  17. Genome Sequences of Two Lytic Staphylococcus aureus Bacteriophages Isolated from Wastewater

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Two lytic double-stranded DNA (dsDNA) bacteriophages, belonging to the family Herelleviridae, were isolated from wastewater in Western Australia. Biyabeda-mokiny 2 appears to belong to the genus Kayvirus, and Koomba-kaat 1 to Silviavirus.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. The RNA-Binding Protein ProQ Promotes Antibiotic Persistence in Salmonella

    • mBio
    • mBio, Ahead of Print. Bacterial populations can survive exposure to antibiotics through transient phenotypic and gene expression changes. These changes can be attributed to a small subpopulation of bacteria, giving rise to antibiotic persistence. Although this phenomenon has been known for decades, much remains to be learned about the mechanisms that drive persister formation. The RNA-binding protein ProQ has recently emerged as a global regulator of gene expression.

      • Bacterial pathogens
      • Salmonella
  19. Characterization of Multiple Alginate Lyases in a Highly Efficient Alginate-Degrading Vibrio Strain and Its Degradation Strategy

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. Alginate is an important polysaccharide in the ocean that supports the growth of marine microorganisms. Many widespread Vibrio species possess alginate lyases and can utilize alginate as a carbon source, but the detailed alginate degradation mechanism in Vibrio remains to be further explored.

      • Bacterial pathogens
      • Vibrio
  20. Structural Equation Models Suggest That On-Farm Noncrop Vegetation Removal Is Not Associated with Improved Food Safety Outcomes but Is Linked to Impaired Water Quality

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. While growers have reported pressures to minimize wildlife intrusion into produce fields through noncrop vegetation (NCV) removal, NCV provides key ecosystem services. To model food safety and environmental tradeoffs associated with NCV removal, published and publicly available food safety and water quality data from the Northeastern United States were obtained.

      • Produce Safety
      • Post Harvest
      • Pre Harvest
  21. Antibiotics Limit Adaptation of Drug-Resistant Staphylococcus aureus to Hypoxia

    • Antimicrobial Agents and Chemotherapy
    • Antimicrobial Agents and Chemotherapy, Ahead of Print. Bacterial pathogens are confronted with a range of challenges at the site of infection, including exposure to antibiotic treatment and harsh physiological conditions, that can alter the fitness benefits and costs of acquiring antibiotic resistance.

      • Bacterial pathogens
      • Staphylococcus aureus
  22. Co‐existence of two Yersinia ruckeri biotypes and serotype O1a retrieved from rainbow trout (Oncorhynchus mykiss) farmed in Puno, Peru

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Yersinia ruckeri causes important economic losses for rainbow trout (Oncorhynchus mykiss) farms worldwide. This bacterial disease is likely the most common among trout in Peru; however, no commercial vaccine is available nationally, which is, in part, due to a lack of information on the bacterium. The aim of the current study was to characterize 29 Y.

      • Bacterial pathogens
      • Yersinia
  23. Genomes of Vibrio metoecus co-isolated with Vibrio cholerae extend our understanding of differences between these closely related species

    • Gut Pathogens
    • Background Vibrio cholerae, the causative agent of cholera, is a well-studied species, whereas Vibrio metoecus is a recently described close relative that is also associated with human infections. The availability of V. metoecus genomes provides further insight into its genetic differences from V. cholerae.

      • Bacterial pathogens
      • Vibrio
  24. Campylobacter bilis, the second novel Campylobacter species isolated from chickens with Spotty Liver Disease, can cause the disease

    • Veterinary Microbiology
    • Spotty Liver Disease (SLD) is a significant disease of commercial layer hens. It can cause up to 10% flock mortalities and reduce egg production by 25%. Campylobacter hepaticus has been identified as the main cause of the disease, although it also appears that predisposing factors, such as some form of stress, may increase the likelihood of clinical disease occurring.

      • Bacterial pathogens
      • Campylobacter
  25. Determination of four aflatoxins on dark tea infusions and aflatoxin transfers evaluation during tea brewing

    • Food Chemistry
    • In daily tea drinking, little is known on aflatoxin transfers from tea-leaf to infusion during brewing and the actual intake. A verified aflatoxins analytical method on tea infusion is significant to the exposure assessment. Here, an optimal method 3 (M3) was screened and validated on four aflatoxins (B1, B2, G1 and G2) simultaneous determination.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins