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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 751 - 775 of 41884

  1. Characterization and mechanism of simultaneous degradation of aflatoxin B1 and zearalenone by an edible fungus of Agrocybe cylindracea GC-Ac2

    • Frontiers in Microbiology
    • Contamination with multiple mycotoxins is a major issue for global food safety and trade. This study focused on the degradation of aflatoxin B1 (AFB1) and zearalenone (ZEN) by 8 types of edible fungi belonging to 6 species, inclulding Agaricus bisporus, Agrocybe cylindracea, Cyclocybe cylindracea, Cyclocybe aegerita, Hypsizygus marmoreus and Lentinula edodes. Among these fungi, Agrocybe cylindracea strain GC-Ac2 was shown to be the most efficient in the degradation of AFB1 and ZEN.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  2. Multi-omics revealed rumen microbiota metabolism and host immune regulation in Tibetan sheep of different ages

    • Frontiers in Microbiology
    • The rumen microbiota and metabolites play an important role in energy metabolism and immune regulation of the host. However, the regulatory mechanism of rumen microbiota and metabolite interactions with host on Tibetan sheep’s plateau adaptability is still unclear. We analyzed the ruminal microbiome and metabolome, host transcriptome and serum metabolome characteristics of Tibetan sheep at different ages.

      • Bacterial pathogens
      • Vibrio
  3. Geographical and temporal distribution of multidrug-resistant Salmonella Infantis in Europe and the Americas

    • Frontiers in Microbiology
    • Recently emerged S. Infantis strains carrying resistance to several commonly used antimicrobials have been reported from different parts of the globe, causing human cases of salmonellosis and with occurrence reported predominantly in broiler chickens. Here, we performed phylogenetic and genetic clustering analyses to describe the population structure of 417 S. Infantis originating from multiple European countries and the Americas collected between 1985 and 2019.

      • Bacterial pathogens
      • Salmonella
  4. The Influence of Long-Term Storage on the Epiphytic Microbiome of Postharvest Apples and on Penicillium expansum Occurrence and Patulin Accumulation

    • Toxins
    • Patulin is a secondary metabolite primarily synthesized by the fungus Penicillium expansum, which is responsible for blue mold disease on apples. The latter are highly susceptible to fungal infection in the postharvest stages. Apples destined to produce compotes are processed throughout the year, which implies that long periods of storage are required under controlled atmospheres. P.

      • Natural toxins
      • Mycotoxins
  5. Seasonal Variation and Risk Assessment of Exposure to Aflatoxin M1 in Milk, Yoghurt, and Cheese Samples from Ilam and Lorestan Provinces of Iran

    • Journal of Food Composition and Analysis
    • The current study aimed to evaluate aflatoxin M1 (AFM1) contamination in a total number of 240 samples collected during four consecutive seasons (from January to November 2022) from two western Iranian provinces (Ilam and Lorestan). AFM1 was determined by high-performance liquid chromatography with a fluorescence detector after the toxin extraction with immunoaffinity columns. The results showed 100% of AFM1 contamination in all the surveyed matrices.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  6. Whole genome sequencing of nine Vibrio parahaemolyticus strains encoding (Pir) toxin-like genes from shrimp cultures in northern Peru using Oxford Nanopore technology

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Nine Peruvian isolates of Vibrio parahaemolyticus were characterized through sequencing, revealing the presence of simple sequence repeat, Pir toxin-like genes, and genes associated with antibiotic resistance, toxic components, and transposable elements. These findings expand our understanding of the genetic diversity, disease resistance, and virulence in cultivated shrimp populations in Peru.

      • Bacterial pathogens
      • Vibrio
  7. Kinetic and proteomic studies in milk show distinct patterns among major Listeria monocytogenes clones

    • Microbes and Infection
    • Listeria monocytogenes, a contaminant of raw milk, includes hypervirulent clonal complexes (CC) like CC1, CC4, and CC6, highly overrepresented in dairy products when compared to other food types. Whether their higher prevalence in dairy products is the consequence of a growth advantage in this food remains unknown. We examined growth kinetics of five L.

      • Bacterial pathogens
      • Listeria monocytogenes
  8. Effective removal of aflatoxin B1 using modified attapulgite loaded with bacillomycin D from stored peanut kernels

    • Journal of Stored Products Research
    • Peanut kernels could be easily contaminated by Aspergillus flavus and its mycotoxins. This not only reduced their nutritional and economic value, but also posed a serious threat to human health. In this study, acid-modified attapulgite loaded with bacillomycin D (H-ATP-BD) was used for aflatoxin B1 (AFB1) removal in peanut kernels contaminated with A. flavus spores. During storage, H-ATP-BD treatment inhibited mildew of peanut kernels.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  9. Identifying a list of Salmonella serotypes of concern to target for reducing risk of salmonellosis

    • Frontiers in Microbiology
    • There is an increasing awareness in the field of Salmonella epidemiology that focusing control efforts on those serotypes which cause severe human health outcomes, as opposed to broadly targeting all Salmonella, will likely lead to the greatest advances in decreasing the incidence of salmonellosis. Yet, little guidance exists to support validated, scientific selection of target serotypes.

      • Bacterial pathogens
      • Salmonella
  10. Antimicrobial effects of Cinnamomum verum essential oil against Enterococcus faecalis and Staphylococcus aureus in mulberry and carrot juices

    • International Journal of Food Science & Technology
    • The essential oil is extracted from Cinnamomum verum through Clevenger. The antimicrobial activities of essential oils were researched in this study. CEO exhibited higher antibacterial effects against S. aureus and E. faecalis. Cytoplasmic membrane permeability plays a vital role in the CEO bactericidal action. Summary In developing countries, fresh fruit juices are prepared and sold without ongoing assessment of the quality and safety of mulberry and carrot juices.

      • Bacterial pathogens
      • Staphylococcus aureus
  11. Disruption of a glycosyl transferase family 17 protein alters cadmium accumulation and resistance in rice (Oryza sativa)

    • Plant and Soil
    • Aims Cadmium (Cd) is absorbed by plants into the food chain as a trace pollutant harmful to humans. The rice (Oryza sativa. L) glycosyltransferases (OsGTs) family is a large protein family with over hundreds of members, however, prior studies have failed to identify which OsGTs has a role in plants' response to Cd toxicity.

      • Chemical contaminants
      • Heavy Metals
  12. Processing factors of pesticide residues in cereal grain fractions

    • Food Control
    • This study examined the distribution of 37 pesticide residues in different cereal grains (rye, wheat, oat, and barley) and their fractions, including flour, bran, and feed bran. The grains used in the study were sprayed in the field before processing to provide a more accurate representation of the fate of pesticide residues in these fractions. Pesticides were extracted using the QuEChERS method and analyzed by GC-MS/MS and LC-MS/MS.

      • Chemical contaminants
      • Pesticide residues
  13. Prioritisation of pesticides and target organ systems for dietary cumulative risk assessment based on the 2019–2021 monitoring cycle

    • EFSA Journal
    • Abstract Aiming at accelerating the implementation of cumulative risk assessment to pesticide residues, this report describes a two‐step prioritisation analysis, on individual pesticides and on target organ systems, that allows to identify (i) low‐priority substances expected to have a marginal contribution to cumulative risk, and (ii) high priority organ systems to be addressed in future cumulative risk assessments.

      • Chemical contaminants
      • Pesticide residues
  14. Molecular characterization of Campylobacter spp. isolates obtained from commercial broilers and native chickens in Southern Thailand using whole genome sequencing

    • Poultry Science
    • Chickens are the primary reservoirs of Campylobacter spp., mainly C. jejuni and C. coli, that cause human bacterial gastrointestinal infections. However, genomic characteristics and antimicrobial resistance of Campylobacter spp. in low- to middle-income countries need more comprehensive exploration. This study aimed to characterize 21 C. jejuni and 5 C.

      • Bacterial pathogens
      • Campylobacter
  15. Interventions to reduce Salmonella and Campylobacter during chilling and post-chilling stages of poultry processing: a systematic review and meta-analysis

    • Poultry Science
    • Salmonella and Campylobacter are common bacterial hazards causing foodborne illnesses worldwide. A large proportion of Salmonella and Campylobacter illnesses are attributed to contaminated poultry products that are mishandled or under cooked. Processing interventions such as chilling and post-chill dip are critical to reducing microbial contamination of poultry.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  16. Machine learning for storage duration based on volatile organic compounds emitted from 'Jukhyang' and 'Merry Queen' strawberries during post-harvest storage

    • Postharvest Biology and Technology
    • Strawberry (Fragaria × ananassa Duch.) is a widely favored horticultural crop renowned for its unique taste and flavor. To develop an accurate predictive model for strawberry freshness, colorimetric data, total soluble solids, titratable acidity, and volatile organic compounds (VOCs) were investigated in fully ripe 'Jukhyang' and 'Merry Queen' strawberries. Data measurements were conducted after 0, 4, 8, and 12 days of cold storage (10 °C, 79% RH).

      • Produce Safety
      • Post Harvest
  17. Phosphoproteomics analysis reveals the anti-bacterial and anti-virulence mechanism of eugenol against Staphylococcus aureus and its application in meat products

    • International Journal of Food Microbiology
    • The increasing risk of food poisoning caused by Staphylococcus aureus (S. aureus) contamination has aroused great concern about food safety. Eugenol is highly favored due to its broad-spectrum antibacterial activity and non-drug resistance property. The study aimed to reveal the anti-bacterial and anti-virulence mechanisms of eugenol against S. aureus using phosphoproteomics.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Superoxide dismutase, a novel aflatoxin oxidase from Bacillus pumilus E-1-1-1: Study on the degradation mechanism of aflatoxin M1 and its application in milk and beer

    • Food Control
    • The aim of this work was to study the effect of a recombinant superoxide dismutase (rSOD) from Bacillus pumilus E−1-1-1 regarding the degradation of aflatoxin M1 (AFM1) in model solution. The degradation mechanism was further explored and applied in milk and beer. The Kinetic Momentum and maximal velocity of the rSOD towards AFM1 were 3.6 μg/mL and 1.8 μg/mL/min, respectively. The rSOD-mediated AFM1 degradation product was identified as C12H11O3.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  19. The significance of gut microbiota in the etiology of autoimmune hepatitis: a narrative review

    • Frontiers in Cellular and Infection Microbiology
    • Autoimmune hepatitis (AIH) is a chronic inflammatory disease of the liver that is mediated by autoimmunity and has complex pathogenesis. Its prevalence has increased globally. Since the liver is the first organ to be exposed to harmful substances, such as gut-derived intestinal microbiota and its metabolites, gut health is closely related to liver health, and the “liver-gut axis” allows abnormalities in the gut microbiota to influence the development of liver-related diseases such as AIH.

      • Viruses
      • Hepatitis
  20. Genetic characterization of Toxoplasma gondii from human and chicken isolates from Argentina

    • Parasitology Research
    • This study aimed to determine the nPCR-RFLP genotypes of newly obtained T. gondii isolates from human congenital toxoplasmosis cases in Argentina and to determine their allelic profiles for virulence genes ROP18/ROP5. In addition, the ROP18/ROP5 profiles were also determined for previously characterized T. gondii samples. Isolation from congenital toxoplasmosis cases was carried out in mouse bioassay from two placentas (P1 and P2).

      • Parasites
      • Toxoplasma gondii
  21. Study of Shellfish Growing Area During Normal Harvesting Periods and Following Wastewater Overflows in an Urban Estuary With Complex Hydrography

    • Food and Environmental Virology
    • Viral testing combined with hydrographic studies is considered standard good practice in determining microbiological impacts on shellfish growing areas following wastewater overflows.

      • Viruses
      • Norovirus
  22. Bioactivity and molecular docking studies of selected plant compounds

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND The shortcomings of synthetic pesticides are becoming increasingly evident. In the pursuit of looking for alternative, environmentally friendly pesticides, the potential use of two naturally occurring sesquiterpenes, α‐bisabolol and bisabolol oxide A, as bactericides or acaricides, was investigated against three gram‐positive and three gram‐negative bacteria, and the eggs and larvae of the cattle tick Hyalomma scupense, respectively.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  23. Meat and meat products as potential sources of emerging MDR Bacillus cereus: groEL gene sequencing, toxigenic and antimicrobial resistance

    • BMC Microbiology
    • Background Bacillus cereus is implicated in severe foodborne infection in humans. This study intended to assess the occurrence, groEL gene sequencing, biofilm production, and resistance profiles of emerged multidrug resistant (MDR) B. cereus in meat and meat product samples.

      • Bacterial pathogens
      • Bacillus cereus
  24. Modelling of Salmonella Enteritidis inactivation in liquid whole egg under dynamic manothermosonication treatments

    • Innovative Food Science & Emerging Technologies
    • Manothermosonication (MTS) is a potential alternative to traditional thermal pasteurisation of liquid whole egg (LWE), aiming at a lower thermal load than in the thermal treatment, and thus may less affect the food quality while delivering microbiological safety.

      • Bacterial pathogens
      • Salmonella
  25. A novel metal–organic framework based electrochemical immunosensor for the rapid detection of Salmonella typhimurium detection in milk

    • Food Chemistry
    • Salmonella is one of the most prevalent pathogens causing foodborne diseases. In this study, a novel electrochemical immunosensor was designed for the rapid and accurate detection of Salmonella typhimurium (S. typhimurium) in milk. Platinum nanoparticles and Co/Zn-metal–organic framework @carboxylic multiwalled carbon nanotubes in the immunosensor acted synergistically to enhance the sensing sensitivity and stability.

      • Bacterial pathogens
      • Salmonella