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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1176 - 1200 of 41884

  1. A machine learning approach to identifying Salmonella stress response genes in isolates from poultry processing

    • Food Research International
    • We explored the potential of machine learning to identify significant genes associated with Salmonella stress response during poultry processing using whole genome sequencing (WGS) data. The Salmonella isolates (n = 177) used in this study were obtained from various chicken sources (skin before chiller, chicken carcass before chiller, frozen chicken, and post-chill chicken carcass).

      • Bacterial pathogens
      • Salmonella
  2. In silico exploration of Serratia sp. BRL41 genome for detecting prodigiosin Biosynthetic Gene Cluster (BGC) and in vitro antimicrobial activity assessment of secreted prodigiosin

    • PLOS ONE
    • by Farhana Boby, Md. Nurul Huda Bhuiyan, Barun Kanti Saha, Subarna Sandhani Dey, Anik Kumar Saha, Md Jahidul Islam, Mahci Al Bashera, Shyama Prosad Moulick, Farhana Jahan, Md. Asad Uz Zaman, Sanjana Fatema Chowdhury, Showti Raheel Naser, Md. Salim Khan, Md. Murshed Hasan Sarkar The raising concern of drug resistance, having substantial impacts on public health, has instigated the search of new natural compounds with substantial medicinal activity.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  3. Increased fecal ethanol and enriched ethanol-producing gut bacteria Limosilactobacillus fermentum, Enterocloster bolteae, Mediterraneibacter gnavus and Streptococcus mutans in nonalcoholic steatohepatitis

    • Frontiers in Cellular and Infection Microbiology
    • Background Non-alcoholic steatohepatitis (NASH) has become a major public health issue as one of the leading causes of liver disease and transplantation worldwide. The instrumental role of the gut microbiota is emerging but still under investigation. Endogenous ethanol (EtOH) production by gut bacteria and yeasts is an emerging putative mechanism.

      • Viruses
      • Hepatitis
  4. Three novel sequencing types from seventeen Staphylococcus aureus genomes isolated from dairy cows milk in the Free State Province of South Africa

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Staphylococcus aureus is one of the major pathogens causing bovine mastitis, which results in huge economic losses in the dairy industry worldwide. Here, we report genome sequences of 17 Saureus strains, with three novel sequencing types (ST8495, ST8500, and ST8501) isolated from the milk of dairy cows with subclinical mastitis.

      • Bacterial pathogens
      • Staphylococcus aureus
  5. Novel helix loop-mediated isothermal amplification (HAMP) assay for colorimetric detection of Staphylococcus aureus in milk

    • World Journal of Microbiology and Biotechnology
    • Staphylococcus aureus is an important and leading cause of foodborne diseases worldwide. Prompt detection and recall of contaminated foods are crucial to prevent untoward health consequences caused by S. aureus. Helix loop-mediated isothermal amplification (HAMP) is an exciting recent addition to the array of available isothermal-based nucleic acid amplification techniques. This study aimed to develop and evaluate a HAMP assay for detecting S.

      • Bacterial pathogens
      • Staphylococcus aureus
  6. Yessotoxins in Mollusks of the Galician Coast from 2014 to 2022: Variability, Biotransformation, and Resistance to Alkaline Hydrolysis

    • Toxins
    • The presence of yessotoxins (YTXs) was analyzed in 10,757 samples of Galician bivalves from 2014 to 2022. Only YTX and 45-OH YTX were found. YTX was detected in 31% of the samples, while 45-OH YTX was found in 11.6% of them. Among the samples containing YTX, 45-OH YTX was detected in 37.3% of cases. The maximum recorded levels were 1.4 and 0.16 mg of YTX-equivalentsg−1, for YTX and 45-OH YTX, respectively, which are well below the regulatory limit of the European Union.

      • Natural toxins
      • Shellfish toxins
  7. Fluviispira vulneris sp. nov., isolated from human wound secretions

    • Antonie van Leeuwenhoek
    • Human infections by environmental bacteria is becoming an increasing problem and has become a matter of great concern due to the adverse effects worldwide. In this study, we reported a new environmental pathogen. Isolate GX5518T was a novel Gram-negative, aerobic, non-motile, pleomorphic and red-pigmented bacterium, was isolated from human wound secretions (GuangXi, People’s Republic of China).

      • Chemical contaminants
      • Heavy Metals
  8. Characterizing the Influence of a Heterotrophic Bicosoecid Flagellate Pseudobodo sp. on the Dinoflagellate Gambierdiscus balechii

    • Toxins
    • Microbial interactions including competition, mutualism, commensalism, parasitism, and predation, which can be triggered by nutrient acquisition and chemical communication, are universal phenomena in the marine ecosystem. The interactions may influence the microbial population density, metabolism, and even their environmental functions. Herein, we investigated the interaction between a heterotrophic bicosoecid flagellate, Pseudobodo sp.

      • Natural toxins
      • Shellfish toxins
  9. Effects of dietary N‐carbamylglutamate supplemention on the modulation of microbiota and Th17/Treg balance‐related immune signaling after lipopolysaccharide challenge

    • Journal of the Science of Food and Agriculture
    • Abstract Background This study aimed to evaluate the effect of N‐carbamylglutamate (NCG) on the piglets’ growth performance and immune response, and unravel their mechanisms. In a 2 × 2 factorial design including diet (with or without NCG) and immunological challenge (saline or lipopolysaccharide (LPS)), 24 piglets were randomly distributed to four groups. After being fed a basic diet or a NCG‐supplemented diet for 21 days, piglets were administered LPS or saline intraperitoneally.

      • Bacterial pathogens
      • Shigella
  10. Current Knowledge of Individual and Combined Toxicities of Aflatoxin B1 and Fumonisin B1 In Vitro

    • Toxins
    • Mycotoxins are considered the most threating natural contaminants in food. Among these mycotoxins, aflatoxin B1 (AFB1) and fumonisin B1 (FB1) are the most prominent fungal metabolites that represent high food safety risks, due to their widespread co-occurrence in several food commodities, and their profound toxic effects on humans. Considering the ethical and more humane animal research, the 3Rs (replacement, reduction, and refinement) principle has been promoted in the last few years.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  11. Antioxidant effects of phenolic extract from sugarcane straw and mannan extract from brewer's spent yeast on fresh‐cut apples

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Fresh‐cut fruit are convenient ready‐to‐eat products increasingly demanded by consumers, but highly susceptible to oxidation. To increase the shelf life of these products, this industry is currently facing the challenge of finding sustainable natural preservatives capable of maintaining fresh‐cut fruit quality while meeting consumers’ expectations regarding health and environmental concerns.

      • Produce Safety
      • Fresh Cut
  12. First identification and coinfection detection of Enterocytozoon bieneusi, Encephalitozoon spp., Cryptosporidium spp. and Giardia duodenalis in diarrheic pigs in Southwest China

    • BMC Microbiology
    • Background Enterocytozoon bieneusi, Encephalitozoon spp., Cryptosporidium spp., and Giardia duodenalis (G. intestinalis) are enteric pathogens that cause diarrhea in pigs. This study aimed to determine the prevalence of these enteric parasites and their coinfection with E.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  13. Breastmilk microbiome changes associated with lactational mastitis and treatment with dandelion extract

    • Frontiers in Microbiology
    • Introduction

      Dandelion (Pugongying) is one of the most frequently used Chinese herbs for treating lactational mastitis (LM). Pugongying granules, a patented medication primarily comprised of dandelion extract, have been approved by CFDA for LM treatment in China. The aims of this study were to investigate the etiology of LM and the mechanism by which Pugongying granules decrease LM symptoms, with a particular focus on the microbial communities found in breastmilk.

      Methods

      • Bacterial pathogens
      • Staphylococcus aureus
  14. In Vitro Degradation of Zearalenone by Culture Supernatant of Bacillus subtilis

    • Food and Bioprocess Technology
    • Zearalenone (ZEN) is a fungal toxin produced by Fusarium that widely occurs in various types of grains and feed. It has strong reproductive toxicity and a wide range of distribution, which will impact food and feed safety. In this study, Bacillus subtilis ZENL09, which is capable of transforming ZEN was investigated.

      • Natural toxins
      • Mycotoxins
  15. Genomic analysis of Listeria monocytogenes CC7 associated with clinical infections and persistence in the food industry

    • International Journal of Food Microbiology
    • Listeria monocytogenes clonal complex 7 (CC7), belonging to lineage II, is the most common subtype among clinical listeriosis isolates in Norway, and is also commonly found in Norwegian food industry and outdoor environments. In the present study, the relative prevalence of CCs among clinical isolates of L. monocytogenes in European countries during 2010–2015 was determined.

      • Bacterial pathogens
      • Listeria monocytogenes
  16. Validation of a Method Based on Liquid Chromatography-Tandem Mass Spectrometry for Multiclass Screening and Analysis of 59 Veterinary Drugs in Fishery Foods

    • Food Analytical Methods
    • Veterinary drugs (VDs) are regulated to prevent their abuse or misuse and protect humans that consume animal-based food products from exposure to VD residues. VD residues are managed according to the maximum residue limits (MRLs) or by prohibiting the use of VDs based on their residual properties and toxicities. However, all VD residues, even those that are not managed by MRLs, in animal-based food products will be regulated for public health improvement.

      • Chemical contaminants
      • Antibiotic residues
  17. Method for Determination of Multi-mycotoxins in Milk: QuEChERS Extraction Modified Followed by HPLC-FL Analysis

    • Food Analytical Methods
    • The objective was the development and validation of a method for simultaneous mycotoxins determination (aflatoxins B1 — AFB1, G1 — AFG1, G2 — AFG2 and M1 — AFM1, ochratoxin — OTA, and zearalenone — ZEA) in milk by high-performance liquid chromatography with fluorescence detector.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  18. Seroprevalence and risk factors associated with Toxoplasma gondii in pigs in Haryana, India

    • Zoonoses and Public Health
    • Abstract Aims Toxoplasmosis is one of the most common food‐borne parasitic zoonosis, caused by Toxoplasma gondii, an obligate intracellular protozoan parasite. A cross‐sectional study was carried out to determine the seroprevalence of T. gondii and associated risk factors in pigs in Haryana, India. Methods and Results Serum samples were collected from 429 pigs from three agroclimatic zones (I–III) of Haryana and analysed for the presence of antibodies against T.

      • Parasites
      • Toxoplasma gondii
  19. GERDH: an interactive multi‐omics database for cross‐species data mining in horticultural crops

    • The Plant Journal
    • SUMMARY Horticultural plants contribute immensely to the quality of human's life. The rapid development of omics studies on horticultural plants has resulted in large volumes of valuable growth‐ and development‐related data. Genes that are essential for growth and development are highly conserved in evolution. Cross‐species data mining reduces the impact of species heterogeneity and has been extensively used for conserved gene identification.

      • Produce Safety
      • Post Harvest
  20. Hexadecanamide alleviates Staphylococcus aureus-induced mastitis in mice by inhibiting inflammatory responses and restoring blood-milk barrier integrity

    • PLOS Pathogens
    • by Lijuan Bao, Hao Sun, Yihong Zhao, Lianjun Feng, Keyi Wu, Shan Shang, Jiawen Xu, Ruping Shan, Shiyu Duan, Min Qiu, Naisheng Zhang, Xiaoyu Hu, Caijun Zhao, Yunhe Fu Subacute ruminal acidosis (SARA) has been demonstrated to promote the development of mastitis, one of the most serious diseases in dairy farming worldwide, but the underlying mechanism is unclearn.

      • Bacterial pathogens
      • Staphylococcus aureus
  21. Anti Staphylococcus aureus activity of shikonin @ chitosan nanoemulsion and its effect on the storage quality of pork

    • Food Control
    • Shikonin has been used in food production because of its potent bacteriostatic activity and colorability, but it is limited to be widely used because of its poor water solubility. The aim of this study was to prepare shikonin @ chitosan nanoemulsion (NS) to improve the solubility of shikonin and evaluate its antibacterial activity against Staphylococcus aureus (S. aureus) and the effect on storage quality of a pork food model.

      • Bacterial pathogens
      • Staphylococcus aureus
  22. The implication of viability and pathogenicity by truncated lipopolysaccharide in Yersinia enterocolitica

    • Applied Microbiology and Biotechnology
    • Abstract The fast envelope stress responses play a key role in the transmission and pathogenesis of Yersinia enterocolitica, one of the most common foodborne pathogens. Our previous study showed that deletion of the waaF gene, essential for the biosynthesis of lipopolysaccharide (LPS) core polysaccharides, led to the formation of a truncated LPS structure and induced cell envelope stress.

      • Bacterial pathogens
      • Yersinia
  23. Bioconversion of feather waste into bioactive nutrients in water by Bacillus licheniformis WHU

    • Applied Microbiology and Biotechnology
    • Abstract Feathers become hazardous pollutants when deposited directly into the environment. The rapid expansion of the poultry industry has significantly increased feather waste, necessitating the development of new ways to degrade and utilize feathers.

      • Bacterial pathogens
      • Staphylococcus aureus
  24. Genomic and proteomic characterization of vB_SauM-UFV_DC4, a novel Staphylococcus jumbo phage

    • Applied Microbiology and Biotechnology
    • Abstract Staphylococcus aureus is one of the most relevant mastitis pathogens in dairy cattle, and the acquisition of antimicrobial resistance genes presents a significant health issue in both veterinary and human fields. Among the different strategies to tackle S.

      • Bacterial pathogens
      • Staphylococcus aureus
  25. Quercetin alleviates zearalenone-induced apoptosis and necroptosis of porcine renal epithelial cells by inhibiting CaSR/CaMKII signaling pathway

    • Food and Chemical Toxicology
    • Zearalenone (ZEA) is a mycotoxin that is highly contaminated in feed and can cause severe toxic effects on the kidneys and other organs of animals. Quercetin (QUE) is a plant-derived flavonoid with a variety of detoxification properties, but the mechanism by which QUE detoxifies the toxic effects induced by ZEA has not yet been fully elucidated. We treated porcine kidney cells (PK15) with 80 μM ZEA and/or 30 μM QUE.

      • Natural toxins
      • Mycotoxins