An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1201 - 1225 of 41884

  1. Production of branched-chain flavor compounds from hydrolysis of pork myofibrillar protein by optimizing the inoculation of Limosilactobacillus fermentum YZU-06 and Staphylococcus saprophyticus CGMCC 3475

    • LWT
    • This study aimed to develop a mixed starter of Limosilactobacillus fermentum YZU-06 and Staphylococcus saprophyticus CGMCC 3475 isolated from Jinhua ham for enhancing the production of branched-chain flavor compounds from pork myofibrillar protein.

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Egg-associated Salmonella enterica serovar Enteritidis: comparative genomics unveils phylogenetic links, virulence potential, and antimicrobial resistance traits

    • Frontiers in Microbiology
    • Salmonella enterica serovar Enteritidis (SE) remains a frequent cause of foodborne illnesses associated with the consumption of contaminated hen eggs. Such a food–pathogen association has been demonstrated epidemiologically, but the molecular basis for this association has not been explored. Comparative genomic analysis was implemented to decipher the phylogenomic characteristics, antimicrobial resistance, and virulence potential of eggs-associated SE.

      • Bacterial pathogens
      • Salmonella
  3. Residual Pattern of Chlorantraniliprole, Thiamethoxam, Flubendiamide and Deltamethrin in Tomato Fruit and Soil

    • Bulletin of Environmental Contamination and Toxicology
    • Tomato, Lycopersicon esculentum L. is grown widely as an important day-to-day demand vegetable. The crop is attacked by various polyphagous insect pests like tomato fruit borer, stink bug, cabbage looper, flea beetle, aphids, whitefly, two-spotted spider mite, etc., and oligophagous insects like leaf-miner, five-spotted hawkmoth, etc. To combat the damage and yield loss, various chemical insecticides were sprayed on tomatoes under field conditions.

      • Chemical contaminants
      • Pesticide residues
  4. Tyrosinase enzyme purification and immobilization from Pseudomonas sp. EG22 using cellulose coated magnetic nanoparticles: characterization and application in melanin production

    • World Journal of Microbiology and Biotechnology
    • Melanin is a brown-black pigment with significant roles in various biological processes. The tyrosinase enzyme catalyzes the conversion of tyrosine to melanin and has promising uses in the pharmaceutical and biotechnology sectors. This research aims to purify and immobilize the tyrosinase enzyme from Pseudomonas sp. EG22 using cellulose-coated magnetic nanoparticles.

      • Bacterial pathogens
      • Staphylococcus aureus
  5. Assessment of the Adverse Health Effects of Aflatoxin Exposure from Unpackaged Peanut Oil in Guangdong, China

    • Toxins
    • Aflatoxins are liver carcinogens and are common contaminants in unpackaged peanut (UPP) oil. However, the health risks associated with consuming aflatoxins in UPP oil remain unclear. In this study, aflatoxin contamination in 143 UPP oil samples from Guangdong Province were assessed via liquid chromatography–tandem mass spectrometry (LC-MS). We also recruited 168 human subjects, who consumed this oil, to measure their liver functions and lipid metabolism status.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
      • Viruses
      • Hepatitis
  6. Control of Salmonella in wheat grains with sodium bisulfate (SBS) tempering and its impact on flour quality

    • Cereal Chemistry
    • AbstractBackground and ObjectivesIn the last decade, the incidence of foodborne illness outbreaks and recalls connected with wheat flour and flour‐based goods infected with enteric bacteria such as Salmonella has grown. This study investigated the activity of sodium bisulfate (SBS) as an antibacterial agent against four different serovars of Salmonella enterica.FindingsThe dose‐dependent, anti‐Salmonella concentration of SBS revealed a minimum inhibitory activity (MIC) of 0.32%.

      • Bacterial pathogens
      • Salmonella
  7. Novel techniques for the mass scale production of nutritionally improved fungal treated lignocellulosic biomass for ruminants feeding

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Laboratory scale experiments have shown that treatment with selective lignin degrading white rot fungi improves the nutritional value and ruminal degradability of lignocellulosic biomass (LCB). However, the lack of effective field‐applicable pasteurization methods has long been recognized as a major obstacle for scaling up the technique for fungal treatment of large quantities of LCB for animal feeding.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  8. Diverse Listeria monocytogenes in-house clones are present in a dynamic frozen vegetable processing environment

    • International Journal of Food Microbiology
    • Listeria (L.monocytogenes is of global concern for food safety as the listeriosis-causing pathogen is widely distributed in the food processing environments, where it can survive for a long time. Frozen vegetables contaminated with L. monocytogenes were recently identified as the source of two large listeriosis outbreaks in the EU and US.

      • Bacterial pathogens
      • Listeria monocytogenes
  9. Serological and Molecular Detection of Toxoplasma gondii in Domestic Pigs Intended for Human Consumption and Potential Occupational Hazard to Pig Farmers in India

    • Foodborne Pathogens and Disease
    • Toxoplasma gondii, an important food-borne zoonotic parasite, poses a worldwide public health hazard. Domestic pigs are considered one of the main intermediate hosts in the zoonotic transmission of T. gondii. To date, seroepidemiological information on T. gondii in domestic pigs in India is very scarce, and there are no reports of occupational hazards to pig farmers in this country. Here, we aimed at estimating the occurrence of T.

      • Parasites
      • Toxoplasma gondii
  10. Inactivation of Listeria monocytogenes by hydrogen peroxide addition in commercial cheese brines

    • Journal of Food Protection
    • Commercial cheese brines are used repeatedly over extended periods, potentially for years, and can be a reservoir for salt-tolerant pathogens, such as Listeria monocytogenes. The objective of this study was to determine the inactivation of L. monocytogenes in cheese brines treated with hydrogen peroxide (H2O2) (0, 50, and 100 ppm) at holding temperatures representing manufacturing conditions.

      • Bacterial pathogens
      • Listeria monocytogenes
  11. Identification of virulence factors and antibiotic resistance in Salmonella enterica subsp. enterica serovar Javiana (FARPER-220) isolated from broiler chickens

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Genome sequencing of highly virulent Salmonella enterica subsp. enterica serovar Javiana strain FARPER-220 (ST-1674) isolated from broiler chickens in Peru revealed multiple virulence factors, antibiotic resistance genes, and invasion-related subcategories. The results provide insights into the potential importance of this strain in causing infections in various animals.

      • Bacterial pathogens
      • Salmonella
  12. 209 Prevalence of Antimicrobial Resistance Genes and Mobile Genetic Elements in the Swine Gut Microbiome

    • Journal of Animal Science
    • Antimicrobial resistance (AMR) is one of the most pressing threats to public health. It contributes to over a million deaths a year currently and by 2050 it is expected to cause more annual death than cancer. The swine industry has taken important steps to address the AMR crisis by phasing out the use of antimicrobial growth promoters.

      • Bacterial pathogens
      • Vibrio
  13. 221 Increasing Functional Amino Acid Ratios Does Not Improve Growth Performance in Pigs Raised Under Poor Sanitary Conditions When Fed with Individual Precision Feeding Or Conventional Feeding Systems

    • Journal of Animal Science
    • Immune system activation redirects dietary nutrients to defense mechanisms, thereby impairing growth performance of pigs. Supplementing pigs with functional amino acids (AA) such as Met, Thr and Trp was shown to support the immune system and reduce the negative effects on growth. However, pigs respond differently to immune stressors which increase herd variability.

      • Bacterial pathogens
      • Salmonella
  14. Risks for animal health related to the presence of ochratoxin A (OTA) in feed

    • EFSA Journal
    • Abstract In 2004, the EFSA Panel on Contaminants in the Food Chain (CONTAM) adopted a Scientific Opinion on the risks to animal health and transfer from feed to food of animal origin related to the presence of ochratoxin A (OTA) in feed. The European Commission requested EFSA to assess newly available scientific information and to update the 2004 Scientific Opinion. OTA is produced by several fungi of the genera Aspergillus and Penicillium.

      • Natural toxins
      • Mycotoxins
  15. Genotypic characterization, antimicrobial susceptibility and virulence determinants of Campylobacter jejuni and Campylobacter coli isolated from pastured poultry farms

    • Frontiers in Microbiology
    • Aim  Campylobacter is the leading bacterial pathogen that causes foodborne illnesses worldwide. Pasture farming is regarded as an important source of agricultural production for small farming communities. Consumer preference for pasture-raised animal products has increased; however, there is a paucity of information on the microbiological quality of pasture-raised poultry products.

      • Bacterial pathogens
      • Campylobacter
  16. Toxigenic characterization, spoilage potential, and antimicrobial susceptibility of coagulase-positive Staphylococcus species isolated from Minas Frescal cheese

    • Journal of Dairy Science
    • This study aimed to identify coagulase-positive staphylococci (CPS) species from 21 samples of clandestine Minas Frescal cheese, investigate the potential for deterioration in psychrotrophic and mesophilic conditions, verify the toxigenic potential of Staphylococcus aureus, and determine the antimicrobial susceptibility profile of toxigenic S. aureus.

      • Bacterial pathogens
      • Staphylococcus aureus
  17. Acute toxicology report of the emerging marine biotoxin Brevetoxin 3 in mice: Food safety implications

    • Food and Chemical Toxicology
    • Brevetoxins (PbTxs) are emerging marine toxins that can lead to Neurotoxic Shellfish Poisoning in humans by the ingestion of contaminated seafood. Recent reports on brevetoxin detection in shellfish in regions where it has not been described before, arise the need of updated guidelines to ensure seafood consumers safety. Our aim was to provide toxicological data for brevetoxin 3 (PbTx3) by assessing oral toxicity in mice and comparing it with intraperitoneal administration.

      • Natural toxins
      • Shellfish toxins
  18. A novel electrochemical strategy based on MXene@rGO composite aerogel-doped UiO-66-NH2 for simultaneous detection of cadmium and lead in grain and water samples

    • Food Chemistry
    • Herein, a novel electrochemical sensing platform is designed for the simultaneous detection of Cd2+ and Pb2+, using MXene@rGO composite aerogel-doped UiO-66-NH2. The MXene@rGO composite aerogel not only serves as the support structure for UiO-66-NH2, but also improves the conductivity of the composite by accelerating the electron transport in the matrix.

      • Chemical contaminants
      • Heavy Metals
  19. 380 The Sow Milk Microbiome and Resistome

    • Journal of Animal Science
    • In addition to oligosaccharides, proteins (e.g., immunoglobulins), lipids, vitamins, and other nutrients vital for piglet health, sow’s milk contains bacteria believed to be important in gut health. Therefore, certain sow milk isolates with potentially beneficial properties may be of interest for use as probiotic strains.

      • Bacterial pathogens
      • Clostridium perfringens
      • Staphylococcus aureus
  20. 322 Metabolic Pathway and Rumen Bacterial Taxa Associated with Divergent Residual Body Weight Gain Phenotypes in Beef Cattle

    • Journal of Animal Science
    • We applied metabolomics and 16S rRNA gene sequencing to determine the metabolic pathway and ruminal bacterial taxa associated with divergent residual body weight (BW) gain phenotype in crossbred beef steers. A group of 108 crossbred growing beef steers (average BW = 282.87 ± 30 kg) were fed a forage-based diet for a period of 56 d in a confinement dry lot equipped with GrowSafe intake nodes to determine their residual body weight gain (RADG) phenotype.

      • Bacterial pathogens
      • Vibrio
  21. PSXIII-20 The Effect of Hemp Varieties and Cannabidiol Concentrations on the in Vitro Ruminal Microbiome

    • Journal of Animal Science
    • This study aimed to evaluate the effect of hemp varieties and cannabidiol (CBD) concentrations on in vitro ruminal microbiota diversity and abundance relative do alfalfa (Medicago sativa). Two ruminally cannulated Angus steers were used as inoculum donors for in vitro incubation.

      • Bacterial pathogens
      • Vibrio
  22. 338 A Survey of Mycotoxin Occurrence in Us Corn and Corn By-Product Feed Ingredients from 2018 to 2022 Harvest Years

    • Journal of Animal Science
    • The aim of this survey was to compare the occurrence and contamination levels of six major mycotoxin categories found in corn and corn by-product feed ingredients harvested in the United States from 2018 through 2022. Mycotoxins are secondary fungal metabolites that can negatively impact animal health and performance and have been routinely found in a variety of feedstuffs including, but not limited to, cereal grains, by-products, silages, dry hays and pasture grasses.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  23. Evaluation of the antibacterial activity and protein profiling of Nile tilapia (Oreochromis niloticus) epidermal mucus under different feeds and culture systems (biofloc technology and earthen pond)

    • Journal of Fish Diseases
    • Abstract The mucus layers of fish serve as the main interface between the organism and the environment. They play an important biological and ecological role. The current study focuses on Nile tilapia epidermal mucus reared under different commercial feeds (coded A and B) and environments (biofloc technology and earthen pond systems). Crude protein levels in feed A and B were 30% and 28%, respectively.

      • Bacterial pathogens
      • Staphylococcus aureus
  24. Lufenuron treatment temporarily represses gene expression and affects the SUMO pathway in liver of Atlantic salmon

    • Journal of Fish Diseases
    • Abstract Lufenuron is a benzoylurea insecticide currently in use to combat sea lice infestation in salmon aquaculture in Chile. With pending approval in Norway, the aim of this work was to study the uptake and toxicity of lufenuron in liver tissue of Atlantic salmon. Juvenile salmon weighing 40 g were given a standard 7‐day oral dose, and bioaccumulation and transcriptional responses in the liver were examined 1 day after the end‐of‐treatment (day 8) and after 1 week of elimination (day 14).

      • Chemical contaminants
      • Pesticide residues
  25. Early Salmonella Typhimurium inoculation may obscure anti-interleukin-10 protective effects on broiler performance during coccidiosis and necrotic enteritis challenge

    • Poultry Science
    • Anti-interleukin (IL)-10 may preserve broiler performance during coccidiosis by diminishing Eimeria spp. host-evasion but has not been evaluated during secondary Clostridium perfringens challenge (necrotic enteritis). Early Salmonella Typhimurium inoculation is implemented in some models to improve repeatability—a potential confounder due to Salmonella using similar IL-10 host evasion pathways.

      • Bacterial pathogens
      • Salmonella