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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 951 - 975 of 18815

  1. Comprehensive analysis of Vibrio alginolyticus: Environmental risk factors in the cultured Gilthead seabream (Sparus aurata) under seasonal fluctuations and water parameter alterations

    • Journal of Fish Diseases
    • Abstract This study aimed to investigate the relationship between seasonal variations, water parameters and the prevalence of Vibriosis in Gilthead seabream. A total of 160 Gilthead seabream fish were sampled over the course of 1 year from private earthen pond farms in the Suez Canal area and examined for abnormalities and internal lesions. Vibrio alginolyticus, the causative agent of Vibriosis, was isolated and characterized from the sampled Gilthead seabream fish.

      • Bacterial pathogens
      • Vibrio
  2. Fast genome-based delimitation of Enterobacterales species

    • PLOS ONE
    • by Julie E. Hernández-Salmerón, Tanya Irani, Gabriel Moreno-Hagelsieb Average Nucleotide Identity (ANI) is becoming a standard measure for bacterial species delimitation. However, its calculation can take orders of magnitude longer than similarity estimates based on sampling of short nucleotides, compiled into so-called sketches. These estimates are widely used. However, their variable correlation with ANI has suggested that they might not be as accurate.

      • Bacterial pathogens
      • Shigella
  3. Analyses of Extended-Spectrum-β-Lactamase, Metallo-β-Lactamase, and AmpC-β-Lactamase Producing Enterobacteriaceae from the Dairy Value Chain in India

    • Antibiotics
    • The consumption of milk contaminated with antibiotic-resistant bacteria poses a significant health threat to humans. This study aimed to investigate the prevalence of Enterobacteriaceae producing β-lactamases (ESBL, MBL, and AmpC) in cow and buffalo milk samples from two Indian states, Haryana and Assam. A total of 401 milk samples were collected from dairy farmers and vendors in the specified districts.

      • Bacterial pathogens
      • Shigella
  4. Improvement of the EN ISO 10273:2017 method for the cultural detection of Yersinia enterocolitica in meat

    • Food Microbiology
    • The isolation of Yersinia enterocolitica from food is challenging, because the bacteria are readily overgrown by the concomitant microflora. In addition, thus far, no strictly selective medium for this species is available. The gold standard for cultural detection of Y. enterocolitica in food is described in the EN ISO 10273:2017. It includes a direct plating step that only enables the detection of large numbers of yersiniae.

      • Bacterial pathogens
      • Yersinia
  5. C500 variants conveying complete mucosal immunity against fatal infections of pigs with Salmonella enterica serovar Choleraesuis C78-1 or F18+ Shiga toxin-producing Escherichia coli

    • Frontiers in Microbiology
    • Salmonella enterica serovar Choleraesuis (S. Choleraesuis) C500 strain is a live, attenuated vaccine strain that has been used in China for over 40 years to prevent piglet paratyphoid. However, this vaccine is limited by its toxicity and does not offer protection against diseases caused by F18+ Shiga toxin-producing Escherichia coli (STEC), which accounts for substantial economic losses in the swine industry.

      • Bacterial pathogens
      • Escherichia coli O157:H7
      • Salmonella
  6. Antioxidant, Anti-Tyrosinase, and Anti-Skin Pathogenic Bacterial Activities and Phytochemical Compositions of Corn Silk Extracts, and Stability of Corn Silk Facial Cream Product

    • Antibiotics
    • Zea mays L. Poaceae stigma (corn silk, CS) is a byproduct of agricultural waste and is used as a traditional herb in many countries. CS is rich in chemical compounds known to benefit human health and is also a remedy for infectious diseases and has anti-proliferative effects on human cancer cell lines. In the present study, CS extract has been evaluated for its antioxidant, antibacterial, and anti-tyrosinase activities and its phytochemical composition.

      • Bacterial pathogens
      • Staphylococcus aureus
  7. Identification, proteolytic activity quantification and biofilm-forming characterization of Gram-positive, proteolytic, psychrotrophic bacteria isolated from cold raw milk

    • PLOS ONE
    • by Mehdi Zarei, Sahar Elmi Anvari, Siavash Maktabi, Per Erik Joakim Saris, Amin Yousefvand Psychrotrophic bacteria of raw milk face the dairy industry with significant spoilage and technological problems due to their ability to produce heat-resistant enzymes and biofilms.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Antibiotic Resistance Profiles and Molecular Characteristics of blaCMY-2-Carrying Salmonella enterica Serovar Albany Isolated from Chickens During 2013–2020 in South Korea

    • Foodborne Pathogens and Disease
    • The production of β-lactamase by nontyphoidal Salmonella has become a public health issue throughout the world. In this study, we aimed to investigate the antimicrobial resistance profiles and molecular characteristics of β-lactamase-producing Salmonella enterica serovar Albany isolates.

      • Bacterial pathogens
      • Salmonella
  9. Temporal stability and community assembly mechanisms in healthy broiler cecum

    • Frontiers in Microbiology
    • In recent years, there has been an unprecedented advancement in in situ analytical approaches that contribute to the mechanistic understanding of microbial communities by explicitly incorporating ecology and studying their assembly. In this study, we have analyzed the temporal profiles of the healthy broiler cecal microbiome from day 3 to day 35 to recover the stable and varying components of microbial communities.

      • Bacterial pathogens
      • Campylobacter
      • Shigella
  10. Prevention and Control of Human Salmonella enterica Infections: An Implication in Food Safety

    • International Journal of Food Science
    • Salmonella is a foodborne zoonotic pathogen causing diarrhoeal disease to humans after consuming contaminated water, animal, and plant products. The bacterium is the third leading cause of human death among diarrhoeal diseases worldwide. Therefore, human salmonellosis is of public health concern demanding integrated interventions against the causative agent, Salmonella enterica.

      • Bacterial pathogens
      • Salmonella
  11. Presence and Resistance Profile of Staphylococcus spp. Isolated from Slaughtered Pigs

    • Vector-Borne and Zoonotic Diseases
    • Background: The objective of this study was to isolate Staphylococcus spp. and to characterize the resistance profile in nasal samples from pigs slaughtered for consumption.

      • Bacterial pathogens
      • Staphylococcus aureus
  12. Recovery of Staphylococci from Teatcups in Milking Parlours in Goat Herds in Greece: Prevalence, Identification, Biofilm Formation, Patterns of Antibiotic Susceptibility, Predictors for Isolation

    • Antibiotics
    • The objectives of this work are (a) to describe staphylococci on the teatcups of milking parlours in goat farms and identify predictors for the presence of staphylococcal isolates on the teatcups, (b) to evaluate relationships with total bacterial counts and somatic cell counts in bulk-tank milk, and (c) to establish patterns of susceptibility to antibiotics for the staphylococcal isolates and identify predictors for the recovery of resistant isolates.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Effects of high stocking density on growth performance and expression of MyD88, and its temporal expression under the challenge of Vibrio parahaemolyticus in the noble scallop Chlamys nobilis

    • Fish & Shellfish Immunology
    • High stocking density has been regarded as an adverse factor in bivalve aquaculture. However, its subsequent molecular response to pathogenic bacteria has been little studied.

      • Bacterial pathogens
      • Vibrio
  14. Vibrio gazogenes-dependent disruption of aflatoxin biosynthesis in Aspergillus flavus: the connection with endosomal uptake and hyphal morphogenesis

    • Frontiers in Microbiology
    • Aflatoxins, a family of fungal secondary metabolites, are toxic and carcinogenic compounds that pose an enormous threat to global food safety and agricultural sustainability. Specifically agricultural products in African, Southeast Asian and hot and humid regions of American countries suffer most damage from aflatoxin producing molds due to the ideal climate conditions promoting their growth.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Vibrio
      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  15. Occurrence, genetic diversity and resistance profiles of Salmonella enterica from Brazilian sausages collected at production facilities

    • Journal of Food Science and Technology
    • This study aimed to investigate the occurrence and the genetic diversity of Salmonella enterica subsp. enterica in sausages from Southern Brazil, evaluate virulence genes and determine the phenotypic and genotypic basis of antimicrobial and sanitizer resistance. Salmonella was detected in sausage samples with an overall prevalence of 5.5%. The prevalent serovars were S. Infantis and S. Rissen.

      • Bacterial pathogens
      • Salmonella
  16. Environmental persistence of Listeria monocytogenes and its implications in dairy processing plants

    • Comprehensive Reviews in Food Science and Food Safety
    • Abstract Listeriosis, an invasive illness with a fatality rate between 20% and 30%, is caused by the ubiquitous bacterium Listeria monocytogenes. Human listeriosis has long been associated with foods. This is because the ubiquitous nature of the bacteria renders it a common food contaminant, posing a significant risk to the food processing sector.

      • Bacterial pathogens
      • Listeria monocytogenes
  17. Identification of Contamination Sources and Assessment of Risk Factors Associated with the Occurrence of Escherichia coli O157:H7 on Small-scale Cow-calf Operations in Oklahoma and Louisiana

    • Journal of Food Protection
    • Escherichia coli O157:H7 is a human pathogen that exists as part of the commensal microflora of cattle and is shed in animal feces. Little is known about the effect of management practices on its occurrence and transmission on small-scale cow-calf operations. Identification of risk factors associated with farm practices could help implement effective measures to control E. coli O157:H7. This study quantified the risk of E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  18. Dietary Macleaya cordata extract supplementation improves the growth performance and gut health of broiler chickens with necrotic enteritis

    • Journal of Animal Science and Biotechnology
    • Background The poultry industry needs effective antibiotic alternatives to control outbreaks of necrotic enteritis (NE) caused by Clostridium perfringens. Methods The aim of this study was to investigate the effects of dietary supplementation with Macleaya cordata extract (MCE) on the immune function and gut microbiota of broilers with NE.

      • Bacterial pathogens
      • Clostridium perfringens
  19. Assessing the mechanisms of multi-drug resistant non-typhoidal Salmonella (NTS) serovars isolated from layer chicken farms in Nigeria

    • PLOS ONE
    • by Idowu Oluwabunmi Fagbamila, Elena Ramon, Antonia A. Lettini, Maryam Muhammad, Alessandra Longo, Keti Antonello, Mabel K. Aworh, Jacob K. P. Kwaga, Paul A. Abdu, Jarleth U. Umoh, Junaidu A. Kabir, Antonia Ricci, Lisa Barco Background In Nigeria, there have been reports of widespread multiple antimicrobial resistance (AMR) amongst Salmonella isolated from poultry.

      • Bacterial pathogens
      • Salmonella
  20. Genetic diversity of Salmonella enterica isolated over 13 years from raw California almonds and from an almond orchard

    • PLOS ONE
    • by Anne-laure Moyne, Opeyemi U. Lawal, Jeff Gauthier, Irena Kukavica-Ibrulj, Marianne Potvin, Lawrence Goodridge, Roger C. Levesque, Linda J. Harris A comparative genomic analysis was conducted for 171 Salmonella isolates recovered from raw inshell almonds and raw almond kernels between 2001 and 2013 and for 30 Salmonella Enteritidis phage type (PT) 30 isolates recovered between 2001 and 2006 from a 2001 salmonellosis outbreak-associated almond orchard.

      • Bacterial pathogens
      • Salmonella
  21. Characterization of microbial ecology, Listeria monocytogenes, and Salmonella sp. on equipment and utensil surfaces in Brazilian poultry, pork, and dairy industries

    • Food Research International
    • This study aimed to evaluate the level of counting by indicator microorganisms, identify the microbial ecology, detect Listeria monocytogenes and Salmonella sp., and determine the presence of virulence genes and biofilm formation. A total of 480 samples were collected from the surfaces of the equipment and utensils using sterile swabs for the detection of L. monocytogenes and Salmonella sp.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
  22. Salmonella enterica relies on carbon metabolism to adapt to agricultural environments

    • Frontiers in Microbiology
    • Salmonella enterica, a foodborne and human pathogen, is a constant threat to human health. Agricultural environments, for example, soil and plants, can be ecological niches and vectors for Salmonella transmission. Salmonella persistence in such environments increases the risk for consumers. Therefore, it is necessary to investigate the mechanisms used by Salmonella to adapt to agricultural environments. We assessed the adaptation strategy of S.

      • Bacterial pathogens
      • Salmonella
  23. Genetic characteristics, antimicrobial susceptibility, and virulence genes distribution of Campylobacter isolated from local dual-purpose chickens in central China

    • Frontiers in Cellular and Infection Microbiology
    • Food-borne antibiotic-resistant Campylobacter poses a serious threat to public health. To understand the prevalence and genetic characteristics of Campylobacter in Chinese local dual-purpose (meat and eggs) chickens, the genomes of 30 Campylobacter isolates, including 13 C. jejuni and 17 C. coli from Jianghan-chickens in central China, were sequenced and tested for antibiotic susceptibility. The results showed that CC-354 and CC-828 were the dominant clonal complexes of C.

      • Bacterial pathogens
      • Campylobacter
  24. Processing and preservation of apple juice by pulsed electric fields combined with cinnamon essential oils: Exploring the effect of synergism

    • Journal of Food Safety
    • Processing of apple juice supplemented with cinnamon essential oils in three different concentrations and processed by pulsed electric field by increased treatment time provided inactivation of endogenous and pathogenic bacteria without adversely affecting the physical, and bioactive properties with an increase in ΔH in thermal properties.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
  25. Microbiota and its antibiotic resistance profile in avocado Guatemalan fruits (Persea nubigena var. guatemalensis) sold at retail markets of Ibarra city, northern Ecuador

    • Frontiers in Microbiology
    • Introduction Avocados are typically sold in unsanitary conditions at the retail markets in Ecuador, which can raise the risk of microbial contamination. These microorganisms could exhibit multi-antibiotic resistance (MAR), being a serious threat concern to human health. In this study, we aimed to evaluate the microbiota and its antibiotic resistance profile in avocado Guatemalan fruits (Persea nubigena var.

      • Bacterial pathogens
      • Staphylococcus aureus