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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 18126 - 18150 of 18795

  1. Trends in the genomic epidemiology of Vibrio cholerae O1 isolated worldwide since 1961

    • International Journal of Antimicrobial Agents
    • Publication date: Available online 22 July 2015

      Author(s): Abhishek Jaiswal, Sounak Sarkar, Parijat Das, Suman Nandy, Hemanta Koley, Banwarilal Sarkar

      • Bacterial pathogens
      • Vibrio
  2. Biofilm formation ability of Salmonella enterica serovar Typhimurium acrAB mutants

    • International Journal of Antimicrobial Agents
    • Publication date: Available online 21 July 2015

      Author(s): Dov B. Schlisselberg, Edna Kler, Guy Kisluk, Dina Shachar, Sima Yaron

      • Salmonella
      • Bacterial pathogens
  3. Phenotypic Heterogeneity, a Phenomenon That May Explain Why Quorum Sensing Does Not Always Result in Truly Homogenous Cell Behavior [Minireviews]

    • Applied and Environmental Microbiology
    • Phenotypic heterogeneity describes the occurrence of "nonconformist" cells within an isogenic population. The nonconformists show an expression profile partially different from that of the remainder of the population. Phenotypic heterogeneity affects many aspects of the different bacterial lifestyles, and it is assumed that it increases bacterial fitness and the chances for survival of the whole population or smaller subpopulations in unfavorable environments.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Vibrio
  4. Diversity of O Antigens within the Genus Cronobacter: from Disorder to Order [Environmental Microbiology]

    • Applied and Environmental Microbiology
    • Cronobacter species are Gram-negative opportunistic pathogens that can cause serious infections in neonates. The lipopolysaccharides (LPSs) that form part of the outer membrane of such bacteria are possibly related to the virulence of particular bacterial strains. However, currently there is no clear overview of O-antigen diversity within the various Cronobacter strains and links with virulence. In this study, we tested a total of 82 strains, covering each of the Cronobacter species.

      • Cronobacter
      • Bacterial pathogens
  5. Genotyping and Source Tracking of Cronobacter sakazakii and C. malonaticus Isolates from Powdered Infant Formula and an Infant Formula Production Factory in China [Food Microbiology]

    • Applied and Environmental Microbiology
    • Cronobacter spp. (formerly defined as Enterobacter sakazakii) are opportunistic bacterial pathogens of both infants and adults. In this study, we analyzed 70 Cronobacter isolates from powdered infant formula (PIF) and an infant formula production facility in China to determine possible contamination routes. The strains were profiled by multilocus sequence typing (MLST), pulsed-field gel electrophoresis (PFGE), PCR-based O-antigen serotyping, and ompA and rpoB sequence analyses.

      • Cronobacter
      • Bacterial pathogens
  6. Development of Multiple-Locus Variable-Number Tandem-Repeat Analysis for Molecular Subtyping of Campylobacter jejuni by Using Capillary Electrophoresis [Food Microbiology]

    • Applied and Environmental Microbiology
    • Campylobacter jejuni is a common cause of the frequently reported food-borne diseases in developed and developing nations. This study describes the development of multiple-locus variable-number tandem-repeat (VNTR) analysis (MLVA) using capillary electrophoresis as a novel typing method for microbial source tracking and epidemiological investigation of C. jejuni.

      • Bacterial pathogens
      • Campylobacter
  7. Implications of Genome-Based Discrimination between Clostridium botulinum Group I and Clostridium sporogenes Strains for Bacterial Taxonomy [Spotlight]

    • Applied and Environmental Microbiology
    • Taxonomic classification of Clostridium botulinum is based on the production of botulinum neurotoxin (BoNT), while closely related, nontoxic organisms are classified as Clostridium sporogenes. However, this taxonomic organization does not accurately mirror phylogenetic relationships between these species. A phylogenetic reconstruction using 2,016 orthologous genes shared among strains of C. botulinum group I and C.

      • Bacterial pathogens
      • Clostridium botulinum
  8. Protozoan Cysts Act as a Survival Niche and Protective Shelter for Foodborne Pathogenic Bacteria [Food Microbiology]

    • Applied and Environmental Microbiology
    • The production of cysts, an integral part of the life cycle of many free-living protozoa, allows these organisms to survive adverse environmental conditions. Given the prevalence of free-living protozoa in food-related environments, it is hypothesized that these organisms play an important yet currently underinvestigated role in the epidemiology of foodborne pathogenic bacteria.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Yersinia
  9. Genes Associated with Desiccation and Osmotic Stress in Listeria monocytogenes as Revealed by Insertional Mutagenesis [Food Microbiology]

    • Applied and Environmental Microbiology
    • Listeria monocytogenes is a foodborne pathogen whose survival in food processing environments may be associated with its tolerance to desiccation. To probe the molecular mechanisms used by this bacterium to adapt to desiccation stress, a transposon library of 11,700 L. monocytogenes mutants was screened, using a microplate assay, for strains displaying increased or decreased desiccation survival (43% relative humidity, 15°C) in tryptic soy broth (TSB).

      • Bacterial pathogens
      • Listeria monocytogenes
  10. Identification of Highly Pathogenic Microorganisms by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry: Results of an Interlaboratory Ring Trial [Bacteriology]

    • Journal of Clinical Microbiology
    • In the case of a release of highly pathogenic bacteria (HPB), there is an urgent need for rapid, accurate, and reliable diagnostics. MALDI-TOF mass spectrometry is a rapid, accurate, and relatively inexpensive technique that is becoming increasingly important in microbiological diagnostics to complement classical microbiology, PCR, and genotyping of HPB. In the present study, the results of a joint exercise with 11 partner institutions from nine European countries are presented.

      • Bacterial pathogens
      • Yersinia
  11. Rapid Diagnosis of Tuberculosis by Real-Time High-Resolution Imaging of Mycobacterium tuberculosis Colonies [Mycobacteriology and Aerobic Actinomycetes]

    • Journal of Clinical Microbiology
    • Culture remains the cornerstone of diagnosis for pulmonary tuberculosis, but the fastidiousness of Mycobacterium tuberculosis may delay culture-based diagnosis for weeks. We evaluated the performance of real-time high-resolution imaging for the rapid detection of M. tuberculosis colonies growing on a solid medium.

      • Bacterial pathogens
  12. A Novel Solid Medium for Culturing Mycobacterium tuberculosis Isolates from Clinical Specimens [Mycobacteriology and Aerobic Actinomycetes]

    • Journal of Clinical Microbiology
    • The laboratory diagnosis of tuberculosis usually relies on culture-based isolation of the causative Mycobacterium tuberculosis bacteria. We developed and evaluated the performance of MOD9, a new blood-free derivative of the MOD4 solid medium on which we previously reported for the isolation and culture of mycobacteria. First, inoculation of Lowenstein-Jensen medium with 21 M.

      • Bacterial pathogens
  13. Defining the Core Genome of Salmonella enterica Serovar Typhimurium for Genomic Surveillance and Epidemiological Typing [Epidemiology]

    • Journal of Clinical Microbiology
    • Salmonella enterica serovar Typhimurium is the most common Salmonella serovar causing foodborne infections in Australia and many other countries. Twenty-one S. Typhimurium strains from Salmonella reference collection A (SARA) were analyzed using Illumina high-throughput genome sequencing. Single nucleotide polymorphisms (SNPs) in 21 SARA strains ranged from 46 to 11,916 SNPs, with an average of 1,577 SNPs per strain. Together with 47 strains selected from publicly available S.

      • Salmonella
      • Bacterial pathogens
  14. Community Incidence of Campylobacteriosis and Nontyphoidal Salmonellosis, France, 2008–2013

    • Foodborne Pathogens and Disease
    • Foodborne Pathogens and Disease , Vol. 0, No. 0.

      • Campylobacter
      • Bacterial pathogens
  15. Characterization of Salmonella enterica Serovar 4,[5],12:i:- Isolates from Korean Food Animals

    • Foodborne Pathogens and Disease
    • Foodborne Pathogens and Disease , Vol. 0, No. 0.

      • Bacterial pathogens
  16. Contamination of knives and graters by bacterial foodborne pathogens during slicing and grating of produce

    • Food Microbiology
    • Publication date: December 2015
      , Volume 52
      Author(s): Marilyn C. Erickson, Jean Liao, Jennifer L. Cannon, Ynes R. Ortega

      • Escherichia coli O157:H7
      • Bacterial pathogens
  17. Impact of a drug-free program on broiler chicken growth performances, gut health, Clostridium perfringens and Campylobacter jejuni occurrences at the farm level

    • Poultry Science
    • The use of antimicrobial agents as feed additives in poultry production is a public health concern due to the overall increase in antimicrobial resistance. Although some alternative products are commercially available, little is known on their potential impact on flock health and productivity.

      • Campylobacter
      • Clostridium perfringens
      • Bacterial pathogens
  18. On-farm comparisons of different cleaning protocols in broiler houses

    • Poultry Science
    • The present study evaluated the effectiveness of 4 cleaning protocols designed to reduce the bacteriological infection pressure on broiler farms and prevent food-borne zoonoses. Additionally, difficult to clean locations and possible sources of infection were identified. Cleaning and disinfection rounds were evaluated in 12 broiler houses on 5 farms through microbiological analyses and adenosine triphosphate hygiene monitoring.

      • Bacterial pathogens
  19. Effect of Salmonella infection on cecal tonsil regulatory T cell properties in chickens

    • Poultry Science
    • Two studies were conducted to study regulatory T cell [Treg (CD4+CD25+)] properties during the establishment of a persistent intestinal infection in broiler chickens. Four-day-old broiler chicks were orally gavaged with 5 x 106 CFU/mL Salmonella enteritidis (S. enteritidis) or sterile PBS (control). Samples were collected at 4, 7, 10, and 14 d postinfection.

      • Salmonella
      • Bacterial pathogens
  20. Fate of Clostridium botulinum and incidence of pathogenic clostridia in biogas processes

    • Journal of Applied Microbiology
    • Aims
      This study aimed to assess the sanitary situation in agricultural biogas plants regarding pathogenic Clostridium spp..

      • Clostridium botulinum
      • Bacterial pathogens
  21. Binding of c-di-AMP to the Staphylococcus aureus sensor kinase KdpD occurs via the USP domain and down-regulates the expression of the Kdp potassium transporter

    • Journal of Bacteriology
    • Nucleotide signalling molecules are important intracellular messengers that regulate a wide range of biological functions. The human pathogen Staphylococcus aureus produces the signalling nucleotide cyclic di-adenosine monophosphate (c-di-AMP). This molecule is common among Gram-positive bacteria and in many organisms essential for survival under standard laboratory growth conditions. In this study, we investigated the interaction of c-di-AMP with the S. aureus KdpD protein.

      • Staphylococcus aureus
      • Bacterial pathogens
  22. Factors Affecting Detection of Hepatitis E Virus on Canadian Retail Pork Chops and Pork Livers Assayed Using Real-Time RT-PCR

    • Zoonoses and Public Health
    • We collected 599 Canadian retail pork chops and 283 pork livers routinely (usually weekly) from April 2011 to March 2012 using the Canadian Integrated Program for Antimicrobial Resistance Surveillance (CIPARS) retail sampling platform. Samples were assayed using validated real-time (q) reverse transcriptase polymerase chain reaction (RT-PCR) and nested classical RT-PCR for the detection of hepatitis E virus (HEV), porcine enteric calicivirus (PEC) and rotavirus (RV).

      • Campylobacter
      • Hepatitis
      • Bacterial pathogens
      • Viruses
  23. Evaluation of Propidium Monoazide and Quantitative PCR To Quantify Viable Campylobacter jejuni Biofilm and Planktonic Cells in Log Phase and in a Viable but Nonculturable State

    • Journal of Food Protection
    • Magajna, Brenda et al. Despite being considered fragile and fastidious, Campylobacter jejuni remains the leading cause of bacterial gastroenteritis in the developed world. C. jejuni survives stresses by forming biofilms or entering a viable but nonculturable (VBNC) state.

      • Campylobacter
      • Bacterial pathogens
  24. Determination of Sources of Escherichia coli on Beef by Multiple-Locus Variable-Number Tandem Repeat Analysis

    • Journal of Food Protection
    • Yang, Xianqin et al. The possible origin of Escherichia coli found on cuts and trimmings in the breaking facility of a beef packing plant was examined using multiple-locus variable-number tandem repeat analysis. Coliforms and E.

      • Bacterial pathogens
  25. Efficacy of Sanitizer Treatments on Survival and Growth Parameters of Escherichia coli O157:H7, Salmonella, and Listeria monocytogenes on Fresh-Cut Pieces of Cantaloupe during Storage

    • Journal of Food Protection
    • Ukuku, Dike O. et al. For health reasons, people are consuming fresh-cut fruits with or without minimal processing and, thereby, exposing themselves to the risk of foodborne illness if such fruits are contaminated with bacterial pathogens. This study investigated survival and growth parameters of Escherichia coli O157:H7, Salmonella, Listeria monocytogenes, and aerobic mesophilic bacteria transferred from cantaloupe rind surfaces to fresh-cut pieces during fresh-cut preparation.

      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Bacterial pathogens