An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 2551 - 2575 of 4087

  1. Detection of Salmonella enteritidis and Salmonella typhimurium in foods using a rapid, multiplex real‐time recombinase polymerase amplification assay

    • Journal of Food Safety
    • The real‐time recombinase polymerase amplification (RPA) could complete the reaction at 35°C in 20 min, which is much faster and cheaper than real‐time polymerase chain reaction. Salmonella enterica serovars, Salmonella enteritidis and Salmonella typhimurium, were detected simultaneously by multiplex real‐time RPA method for the first time. The LOD of S. enteritidis and S. typhimurium without enrichment procedure was 102 CFU/25 g. After enrichment, the LOD was 10 CFU/25 g.

      • Salmonella
      • Bacterial pathogens
  2. High occurrence of β-lactamase-producing Salmonella Heidelberg from poultry origin

    • PLOS ONE
    • by Andrei I. S. Souza, Mauro M. S. Saraiva, Monique R. T. Casas, Gustavo M. Oliveira, Marita V. Cardozo, Valdinete P. Benevides, Fernanda O. Barbosa, Oliveiro C. Freitas Neto, Adriana M. Almeida, Angelo Berchieri Junior

      • Bacterial pathogens
      • Salmonella
  3. Effects of impregnate temperature on extraction of caffeoylquinic acid derivatives from Moringa oleifera leaves and evaluation of inhibitory activity on digestive enzyme, antioxidant, anti‐proliferative and antibacterial activities of the extract

    • International Journal of Food Science & Technology
    • Anti‐digestive enzyme, antioxidant, anti‐proliferative and antibacterial activities of the extract from Moringa oleifera at different extraction temperatures. Summary In an ultrasonic bath and for 30 min in the presence of water as extraction solvent in a ratio of 1:10 (g/mL), effect of extraction temperature on extraction of caffeoylquinic acids (CQAs) from Moringa oleifera leaves (MOL) was investigated.

      • Bacillus cereus
      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  4. Microbial Monitoring in the EDEN ISS Greenhouse, a Mobile Test Facility in Antarctica

    • Frontiers in Microbiology
    • The EDEN ISS greenhouse, integrated in two joined containers, is a confined mobile test facility in Antarctica for the development and optimization of new plant cultivation techniques for future space programs. The EDEN ISS greenhouse was used successfully from February to November 2018 for fresh food production for the overwintering crew at the Antarctic Neumayer III station.

      • Bacterial pathogens
      • Salmonella
  5. Inhibitory effect of cold nitrogen plasma on Salmonella Typhimurium biofilm and its application on poultry egg preservation

    • LWT
    • Author(s): Lin Lin, Xue Liao, Changzhu Li, Mohamed A. Abdel-Samie, Haiying Cui

      • Bacterial pathogens
      • Salmonella
  6. Co-existence of mphA, oqxAB and blaCTX-M-65 on the IncHI2 Plasmid in highly drug-resistant Salmonella enterica serovar Indiana ST17 isolated from retail foods and humans in China

    • Food Control
    • Author(s): Zengfeng Zhang, Jingxian Yang, Xuebin Xu, Xiujuan Zhou, Chunlei Shi, Xiaodong Zhao, Yanhong Liu, Xianming Shi

      • Bacterial pathogens
      • Salmonella
  7. Sequencing and Characterization of Five Extensively Drug-Resistant Salmonella enterica Serotype Typhi Isolates Implicated in Human Infections from Punjab, Pakistan

    • Microbiology Resource Announcements
    • A large outbreak of extensively drug-resistant (XDR) Salmonella enterica serotype Typhi infections is ongoing in Pakistan, predominantly in Sindh Province. Here, we report the sequencing and characterization of five XDR Salmonella Typhi isolates from the Punjab province of Pakistan that are closely related to the outbreak strain and carry the same IncY plasmid.

      • Bacterial pathogens
      • Salmonella
  8. Draft Genome Sequences of 26 Salmonella Isolates Associated with Multiple Outbreaks in Brazil

    • Microbiology Resource Announcements
    • Salmonella enterica subsp. enterica isolates are the leading cause of foodborne illness worldwide. Here, we report the draft genomes of 26 Salmonella isolates of food and clinical origin, belonging to four serovars, associated with outbreaks from 1999 to 2006 in the south of Brazil.

      • Bacterial pathogens
      • Salmonella
  9. Salmonella enterica subsp. arizonae Isolated from a Canine Clinical Case of Prostatitis

    • Microbiology Resource Announcements
    • This is an announcement for the genome sequence of a clinical isolate of Salmonella enterica subsp. arizonae isolated from the urine and prostate of a 6-year-old male Labrador retriever. This is one of the few reports of a Salmonella enterica subsp. arizonae isolate cultured from canine urine.

      • Bacterial pathogens
      • Salmonella
  10. Whole-Genome Sequencing of Salmonella enterica Serovar Infantis and Kentucky Isolates Obtained from Layer Poultry Farms in Ecuador

    • Microbiology Resource Announcements
    • Five strains of Salmonella enterica subsp. enterica serovar Infantis and two strains of S. enterica subsp. enterica serovar Kentucky isolated in 2017 from Ecuadorian layer poultry farms were sequenced using Illumina MiSeq technology. These isolates were collected on layer farms in central Ecuador, one of the most important areas of egg production in the country. The genome sequences of these isolates show valuable information for surveillance purposes.

      • Bacterial pathogens
      • Salmonella
  11. Complete Genomic Sequences of Three Salmonella enterica subsp. enterica Serovar Muenchen Strains from an Orchard in San Joaquin County, California

    • Microbiology Resource Announcements
    • We present here the complete genome sequences of three Salmonella enterica subsp. enterica serovar Muenchen strains, LG24, LG25, and LG26. All three strains were isolated from almond drupes grown in an orchard in San Joaquin County, California, in 2016. These genomic sequences are nonidentical and will contribute to our understanding of S. enterica genomics.

      • Bacterial pathogens
      • Salmonella
  12. Synergistic antibacterial effect of nisin, ethylenediaminetetraacetic acid, and sulfite on native microflora of fresh white shrimp during ice storage

    • Journal of Food Safety
    • The combination of nisin, EDTA, and sulfite at a low dose of 0.625% exhibited higher antimicrobial activity than did a high dose of sulfite (1.25%) for shrimp preservation. Based on aerobic bacteria counts, psychrotrophic bacteria, and TVB‐N, shrimp treatment with combination of nisin, EDTA, and low‐dose sulfite were still acceptable within 10 days of storage.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  13. Antimicrobial activity of goat’s milk fermented by single strain of kefir grain microflora

    • European Food Research and Technology
    • The aim of the study was to assess the antibacterial properties of bioactive compounds released during the fermentation of goat’s milk by selected bacterial strains that are part of the kefir grain microflora. The material used in the experiments was kefir grain microflora (Lactobacillus kefiranofaciens subsp.

      • Bacterial pathogens
      • Salmonella
  14. Overexpression of RamA, Which Regulates Production of the Multidrug Resistance Efflux Pump AcrAB-TolC, Increases Mutation Rate and Influences Drug Resistance Phenotype

    • Antimicrobial Agents and Chemotherapy
    • In Enterobacteriales, the AcrAB-TolC efflux pump exports substrates, including antimicrobials, from the cell. Overexpression of AcrAB-TolC can occur after exposure to fluoroquinolones, leading to multidrug resistance. The expression of AcrAB-TolC in Salmonella is primarily regulated by the transcriptional activator RamA. However, other transcriptional activators, such as MarA, SoxRS, and Rob, can influence AcrAB-TolC expression.

      • Bacterial pathogens
      • Salmonella
  15. Characterization of FosL1, a Plasmid-Encoded Fosfomycin Resistance Protein Identified in Escherichia coli

    • Antimicrobial Agents and Chemotherapy
    • Fosfomycin is gaining renewed interest for treating urinary tract infections. Monitoring fosfomycin resistance is therefore important in order to detect the emergence of novel resistance mechanisms. Here, we used the Rapid Fosfomycin NP test to screen a collection of extended-spectrum-β-lactamase-producing Escherichia coli isolates from Switzerland and found a fosfomycin-resistant isolate in which a novel plasmid-mediated fosfomycin resistance gene, named fosL1, was identified.

      • Bacterial pathogens
      • Salmonella
  16. Combined treatment of β-resorcylic acid and capric acid enhances mild heat pasteurization for inactivating Salmonella Typhimurium in orange juice

    • International Journal of Food Microbiology
    • Author(s): H.W. Kim, M.S. Rhee

      • Bacterial pathogens
      • Salmonella
  17. Putative horizontally acquired genes, highly transcribed during Yersinia pestis flea infection, are induced by hyperosmotic stress and function in aromatic amino acid metabolism

    • Journal of Bacteriology
    • While alternating between insects and mammals during its lifecycle, Yersinia pestis, the flea transmitted bacterium that causes plague, regulates its gene expression appropriately to adapt to these two physiologically disparate host environments. In fleas competent to transmit Y. pestis, low GC content genes y3555, y3551 and y3550 are highly transcribed, suggesting that these genes have a highly prioritized role in flea infection.

      • Bacterial pathogens
      • Salmonella
      • Yersinia
  18. Atypical Salmonella enterica Serovars in Murine and Human Macrophage Infection Models

    • Infection and Immunity
    • Nontyphoidal Salmonella species are globally disseminated pathogens and are the predominant cause of gastroenteritis. The pathogenesis of salmonellosis has been extensively studied using in vivo murine models and cell lines, typically challenged with Salmonella enterica serovar Typhimurium. Although S.

      • Bacterial pathogens
      • Salmonella
  19. Detection of Salmonella Typhimurium and Listeria monocytogenes biofilm cells exposed to different drying and pre-enrichment times using conventional and rapid methods

    • International Journal of Food Microbiology
    • Author(s): A.G. Ríos-Castillo, C. Ripolles-Avila, J.J. Rodríguez-Jerez

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
  20. The complete genome of lytic Salmonella phage vB_SenM-PA13076 and therapeutic potency in the treatment of lethal Salmonella Enteritidis infections in mice

    • Microbiological Research
    • Author(s): Hongduo Bao, Yan Zhou, Khashayar Shahin, Hui Zhang, Fuliang Cao, Maoda Pang, Xuhui Zhang, Shujiao Zhu, Ademola Olaniran, Stefan Schmidt, Ran Wang

      • Bacterial pathogens
      • Salmonella
  21. Fate of Salmonella enterica and enterohemorrhagic Escherichia coli on vegetable seeds contaminated by direct contact with artificially inoculated soil during germination

    • Journal of Food Protection
    • Contaminated vegetable seeds have been identified as a potential source of foodborne bacterial pathogens.  This study was undertaken to observe the behavior of Salmonella and enterohemorrhagic Escherichia coli (EHEC) on vegetable seeds, contaminated by direct contact with artificially inoculated soil, during germination.

      • Salmonella
      • Bacterial pathogens
  22. Viable but Nonculturable Escherichia coli O157:H7 and Salmonella enterica in Fresh Produce: Rapid Determination by Loop-Mediated Isothermal Amplification Coupled with a Propidium Monoazide Treatment

    • Applied and Environmental Microbiology
    • Escherichia coli O157:H7 and Salmonella enterica are leading causes of foodborne outbreaks linked to fresh produce. Both species can enter the "viable but nonculturable" (VBNC) state that precludes detection using conventional culture-based or molecular methods. In this study, we assessed propidium monoazide-quantitative PCR (PMA-qPCR) assays and novel methods combining PMA and loop-mediated isothermal amplification (LAMP) for the detection and quantification of VBNC E. coli O157:H7 and S.

      • Escherichia coli O157:H7
      • Salmonella
      • Bacterial pathogens
  23. Domestic River Water Use and Risk of Typhoid Fever: Results From a Case-control Study in Blantyre, Malawi

    • Clinical Infectious Diseases
    • Background Typhoid fever remains a major cause of morbidity and mortality in low- and middle-income settings. In the last 10 years, several reports have described the reemergence of typhoid fever in southern and eastern Africa, associated with multidrug-resistant H58 Salmonella Typhi. Here, we identify risk factors for pediatric typhoid fever in a large epidemic in Blantyre, Malawi. Methods A case-control study was conducted between April 2015 and November 2016.

      • Salmonella
      • Bacterial pathogens
  24. Light-driven antimicrobial activities of vitamin K3 against Listeria monocytogenes, Escherichia coli O157:H7 and Salmonella Enteritidis

    • Food Control
    • Author(s): Lina Sheng, Zheng Zhang, Gang Sun, Luxin Wang

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
  25. Combination of ultraviolet light‐C and clove essential oil to inactivate Salmonella Typhimurium biofilms on stainless steel

    • Journal of Food Safety
    • Salmonella typhimurium is able to form biofilms as a resistance mechanism against antimicrobials; therefore, it represents a problem for assuring food safety and highlights the importance of research on anti‐biofilm technologies. In this study, S. typhimurium biofilms were inactivated with the combination of clove essential oil (CEO) and ultraviolet light (UV‐C). The volatile composition of the CEO determined by gas chromatography showed eugenol as the major constituent (82%).

      • Salmonella
      • Bacterial pathogens