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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 926 - 950 of 4090

  1. Regulatory Evolution of the phoH Ancestral Gene in Salmonella enterica Serovar Typhimurium

    • Journal of Bacteriology
    • Journal of Bacteriology, Volume 204, Issue 5, May 2022. One important event for the divergence of Salmonella from Escherichia coli was the acquisition by horizontal transfer of the Salmonella pathogenicity island 1 (SPI-1), containing genes required for the invasion of host cells by Salmonella.

      • Bacterial pathogens
      • Salmonella
  2. Fatty Acid Homeostasis Tunes Flagellar Motility by Activating Phase 2 Flagellin Expression, Contributing to Salmonella Gut Colonization

    • Infection and Immunity
    • Infection and Immunity, Ahead of Print. Long-chain-fatty-acid (LCFA) metabolism is a fundamental cellular process in bacteria that is involved in lipid homeostasis, energy production, and infection. However, the role of LCFA metabolism in Salmonella enterica serovar Typhimurium (S. Tm) gut infection remains unclear. Here, using a murine gastroenteritis infection model, we demonstrate involvement of LCFA metabolism in S. Tm gut colonization.

      • Bacterial pathogens
      • Salmonella
  3. Transcytosis of IgA Attenuates Salmonella Invasion in Human Enteroids and Intestinal Organoids

    • Infection and Immunity
    • Infection and Immunity, Ahead of Print. Secretory IgA (SIgA) is the most abundant antibody type in intestinal secretions where it contributes to safeguarding the epithelium from invasive pathogens like the Gram-negative bacterium, Salmonella enterica serovar Typhimurium (STm).

      • Bacterial pathogens
      • Salmonella
  4. Ferrous Iron Uptake Is Required for Salmonella to Persist within Vacuoles of Host Cells

    • Infection and Immunity
    • Infection and Immunity, Ahead of Print. Iron is an essential oligoelement that incorporates into proteins as a biocatalyst or electron carrier. The intracellular pathogen Salmonella enterica serovar Typhimurium (S. Typhimurium) takes iron as free reduced ferrous cation or as oxidized ferric cation complexed to siderophores or ferrichromes.

      • Bacterial pathogens
      • Salmonella
  5. Macrophage Cell Lines and Murine Infection by Salmonella enterica Serovar Typhi L-Form Bacteria

    • Infection and Immunity
    • Infection and Immunity, Ahead of Print. Antibiotic resistance of pathogenic bacteria has emerged as a major threat to public health worldwide. While stable resistance due to the acquisition of genomic mutations or plasmids carrying antibiotic resistance genes is well established, much less is known about the temporary and reversible resistance induced by antibiotic treatment, such as that due to treatment with bacterial cell wall-inhibiting antibiotics such as ampicillin.

      • Bacterial pathogens
      • Salmonella
  6. Analysis of Salmonella enterica Isolated from a Mixed-Use Watershed in Georgia, USA: Antimicrobial Resistance, Serotype Diversity, and Genetic Relatedness to Human Isolates

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Volume 88, Issue 10, May 2022. As the cases of Salmonella enterica infections associated with contaminated water are increasing, this study was conducted to address the role of surface water as a reservoir of S. enterica serotypes.

      • Bacterial pathogens
      • Salmonella
  7. Efficacy of Antimicrobial Interventions Used in Meat Processing Plants against Antimicrobial Tolerant of Non-Antibiotic Resistant (Non-ABR) and Antibiotic Resistant (ABR) Salmonella on Fresh Beef

    • Salmonella is a common cause of foodborne illness in the United States and several strains of Salmonella have been identified as resistant to antibiotics. It is not known whether strains with antibiotics resistance (ABR) and some tolerance to antimicrobial compounds also have the ability to resist the inactivation effects of antimicrobial interventions used in the fresh meat processing.

      • Bacterial pathogens
      • Salmonella
  8. Impact of chlorinated water on pathogen inactivation during wheat tempering and resulting flour quality

    • Outbreaks of enteric pathogens linked to wheat flour have led the wheat milling industry to seek solutions addressing this food safety concern. Chlorinated water at 400-700ppm has been used in the flour milling industry as a tempering aid to control growth of yeast and mold in tempering bins. However, the effectiveness of chlorinated water for inactivating enteric pathogens on wheat kernels remained unknown.

      • Bacterial pathogens
      • Salmonella
  9. A bacteriological survey of fresh minced beef on sale at retail outlets in Scotland in 2019: three food-borne pathogens, hygiene process indicators and phenotypic antimicrobial resistance.

    • The health and economic burden of foodborne illness is high, with approximately 2.4 million cases occurring annually in the United Kingdom. A survey to understand the baseline microbial quality and prevalence of food-related hazards of fresh beef mince on retail sale could inform risk assessment, management and communication to ensure the safety of this commodity.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  10. Outbreak of Salmonella Newport linked to imported frozen cooked crayfish in dill brine, Sweden, July to November 2019

    • Eurosurveillance
    • In autumn 2019, the Public Health Agency of Sweden identified a cluster of Newport cases by whole genome sequencing (WGS). Cases’ distribution in place and time indicated a nation-wide ongoing outbreak. An investigation was initiated to identify the source and prevent further cases.

      • Bacterial pathogens
      • Salmonella
  11. Human Salmonella enteritidis illness outbreak associated with exposure to live mice in British Columbia, Canada, 2018–2019

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. In February 2019, five individuals with Salmonella Enteritidis infections matching by whole genome sequencing (WGS) were identified in the province of British Columbia (BC), Canada. Individuals with available exposure information all reported unique exposure to reptiles or rodents, prompting an outbreak investigation.

      • Bacterial pathogens
      • Salmonella
  12. Genomic Characterization of Cronobacter spp. and Salmonella spp. Strains Isolated From Powdered Infant Formula in Chile

    • Frontiers in Microbiology
    • This study characterized five Cronobacter spp. and six Salmonella spp. strains that had been isolated from 155 samples of powdered infant formula (PIF) sold in Chile and manufactured in Chile and Mexico in 2018–2020. Two strains of Cronobacter sakazakii sequence type (ST) ST1 and ST31 (serotypes O:1 and O:2) and one strain of Cronobacter malonaticus ST60 (O:1) were identified.

      • Bacterial pathogens
      • Cronobacter
      • Salmonella
  13. Revisiting the Biological Behavior of Salmonella enterica in Hydric Resources: A Meta-Analysis Study Addressing the Critical Role of Environmental Water on Food Safety and Public Health

    • Frontiers in Microbiology
    • The increasing number of studies reporting the presence of Salmonella in environmental water sources suggests that it is beyond incidental findings originated from sparse fecal contamination events. However, there is no consensus on the occurrence of Salmonella as its relative serovar representation across non-recycled water sources.

      • Bacterial pathogens
      • Salmonella
  14. Long-Term Interactions of Salmonella Enteritidis With a Lytic Phage for 21 Days in High Nutrients Media

    • Frontiers in Cellular and Infection Microbiology
    • Salmonella spp. is a relevant foodborne pathogen with worldwide distribution. To mitigate Salmonella infections, bacteriophages represent an alternative to antimicrobials and chemicals in food animals and food in general. Bacteriophages (phages) are viruses that infect bacteria, which interact constantly with their host. Importantly, the study of these interactions is crucial for the use of phages as a mitigation strategy. In this study, experimental coevolution of Salmonella Enteritidis (S.

      • Bacterial pathogens
      • Salmonella
  15. Spaceflight Analogue Culture Enhances the Host-Pathogen Interaction Between Salmonella and a 3-D Biomimetic Intestinal Co-Culture Model

    • Frontiers in Cellular and Infection Microbiology
    • Physical forces associated with spaceflight and spaceflight analogue culture regulate a wide range of physiological responses by both bacterial and mammalian cells that can impact infection. However, our mechanistic understanding of how these environments regulate host-pathogen interactions in humans is poorly understood.

      • Bacterial pathogens
      • Salmonella
  16. Protective effect and possible mechanism of arctiin on broilers challenged by Salmonella pullorum

    • Journal of Animal Science
    • This study was aimed to investigate the effects of dietary arctiin (ARC) supplementation (100, 200, and 400 mg/kg) on the growth performance and immune response of broilers after a Salmonella pullorum (S. pullorum) challenge, and we conducted in vitro antibacterial test to explore the bacteriostatic mechanism of ARC.

      • Bacterial pathogens
      • Salmonella
  17. Salmonella Typhimurium outbreak linked to chocolate

    • The Lancet Infectious Diseases
    • As of May 18, 2022, 369 cases of confirmed and probable Salmonella Typhimurium linked to chocolate products from Belgium have been reported globally. Udani Samarasekera reports. Multiple countries have been affected by an outbreak of Salmonella enterica serotype Typhimurium (hereafter S Typhimurium) linked to chocolate products produced in Belgium and distributed to at least 113 nations globally.

      • Bacterial pathogens
      • Salmonella
  18. Prevalence, Antibiotic-Resistance, and Replicon-Typing of Salmonella Strains among Serovars Mainly Isolated from Food Chain in Marche Region, Italy

    • Antibiotics
    • Nontyphoidal salmonellosis (NTS) is the second most commonly reported gastrointestinal infection in humans and an important cause of food-borne outbreaks in Europe. The use of antimicrobial agents for animals, plants, and food production contributes to the development of antibiotic-resistant Salmonella strains that are transmissible to humans through food.

      • Bacterial pathogens
      • Salmonella
  19. mcr-1-Mediated Colistin Resistance and Genomic Characterization of Antimicrobial Resistance in ESBL-Producing Salmonella Infantis Strains from a Broiler Meat Production Chain in Italy

    • Antibiotics
    • This work aimed to evaluate phenotypically and genotypically the colistin susceptibility of 85 Salmonella Infantis strains isolated in Italy from the broiler production chain, and to apply a whole-genome approach for the determination of genes conferring antimicrobial resistance (AMR). All isolates were tested by the broth microdilution method to evaluate the colistin minimum inhibitory concentrations (MICs).

      • Bacterial pathogens
      • Salmonella
  20. The Salmonella transmembrane effector SteD hijacks AP1-mediated vesicular trafficking for delivery to antigen-loading MHCII compartments

    • PLOS Pathogens
    • by Camilla Godlee, Ondrej Cerny, Mei Liu, Samkeliso Blundell, Alanna E. Gallagher, Meriam Shahin, David W. Holden SteD is a transmembrane effector of the Salmonella SPI-2 type III secretion system that inhibits T cell activation by reducing the amounts of at least three proteins–major histocompatibility complex II (MHCII), CD86 and CD97 –from the surface of antigen-presenting cells.

      • Bacterial pathogens
      • Salmonella
  21. Research Note: IsomiRs of chicken miR-146b-5p are activated upon Salmonella enterica serovar Enteritidis infection

    • Poultry Science
    • In order to enrich the knowledge of chicken transcriptomic response to Salmonella enterica serovar Enteritidis infection, 2-day-old chicks were orally inoculated with this bacteria (1.0 × 108 cfu/mL), and then the cecum tissues of 3 days post-inoculation were utilized for RNA sequencing (six replicates each for treatment group and control group). After analysis, we found a variety of inflammatory genes were triggered at the mRNA level upon infection.

      • Bacterial pathogens
      • Salmonella
  22. Thermal Inactivation of Salmonella Typhimurium and the surrogate Enterococcus faecium in Mash Broiler Feed in A Laboratory Scale Circulated Thermal Bath

    • Poultry Science
    • This study compares kinetic parameters of Salmonella and the surrogate Enterococcus faecium in mash broiler feed during thermal inactivation. Two-gram samples of mash broiler feed were added into a filtered sample bag and inoculated with nalidixic acid (NaL, 200 ppm) resistant S. Typhimurium or E.

      • Bacterial pathogens
      • Salmonella
  23. wecB Gene of Salmonella Gallinarum Plays a Critical Role in Systemic Infection of Fowl Typhoid

    • Frontiers in Microbiology
    • Salmonella enterica serovar Gallinarum (S. Gallinarum) is a host-specific pathogen causing fowl typhoid, a severe systemic infection in poultry, which leads to substantial economic losses due to high morbidity and mortality in many developing countries. However, less is known about the pathogenic characteristics and mechanism of S. Gallinarum-induced systemic infection in chickens. In this study, we deleted the S.

      • Bacterial pathogens
      • Salmonella
  24. Similar Carcass Surface Microbiota Observed Following Primary Processing of Different Pig Batches

    • Frontiers in Microbiology
    • Bacterial contamination during meat processing is a concern for both food safety and for the shelf life of pork meat products. The gut microbiota of meat-producing animals is one of the most important sources of surface contamination of processed carcasses. This microbiota is recognized to vary between pigs from different farms and could thus be reflected on the bacterial contamination of carcasses at time of processing.

      • Bacterial pathogens
      • Salmonella
      • Shigella
  25. A risk assessment model for Salmonella spp. in swine carcasses

    • EFSA Journal
    • EFSA Journal, Volume 20, Issue S1, May 2022. Salmonellosis is one of the most important food-borne outbreaks that occurs in the EU/EEA. From the first production stages at slaughter, meat is susceptible to spoilage and can be a substrate for the pathogenic microorganisms growth. Among the pathogens, the presence of Salmonella is mainly due to mishandling during the evisceration stage.

      • Bacterial pathogens
      • Salmonella