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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 976 - 1000 of 4122

  1. mcr-1-Mediated Colistin Resistance and Genomic Characterization of Antimicrobial Resistance in ESBL-Producing Salmonella Infantis Strains from a Broiler Meat Production Chain in Italy

    • Antibiotics
    • This work aimed to evaluate phenotypically and genotypically the colistin susceptibility of 85 Salmonella Infantis strains isolated in Italy from the broiler production chain, and to apply a whole-genome approach for the determination of genes conferring antimicrobial resistance (AMR). All isolates were tested by the broth microdilution method to evaluate the colistin minimum inhibitory concentrations (MICs).

      • Bacterial pathogens
      • Salmonella
  2. The Salmonella transmembrane effector SteD hijacks AP1-mediated vesicular trafficking for delivery to antigen-loading MHCII compartments

    • PLOS Pathogens
    • by Camilla Godlee, Ondrej Cerny, Mei Liu, Samkeliso Blundell, Alanna E. Gallagher, Meriam Shahin, David W. Holden SteD is a transmembrane effector of the Salmonella SPI-2 type III secretion system that inhibits T cell activation by reducing the amounts of at least three proteins–major histocompatibility complex II (MHCII), CD86 and CD97 –from the surface of antigen-presenting cells.

      • Bacterial pathogens
      • Salmonella
  3. Research Note: IsomiRs of chicken miR-146b-5p are activated upon Salmonella enterica serovar Enteritidis infection

    • Poultry Science
    • In order to enrich the knowledge of chicken transcriptomic response to Salmonella enterica serovar Enteritidis infection, 2-day-old chicks were orally inoculated with this bacteria (1.0 × 108 cfu/mL), and then the cecum tissues of 3 days post-inoculation were utilized for RNA sequencing (six replicates each for treatment group and control group). After analysis, we found a variety of inflammatory genes were triggered at the mRNA level upon infection.

      • Bacterial pathogens
      • Salmonella
  4. Thermal Inactivation of Salmonella Typhimurium and the surrogate Enterococcus faecium in Mash Broiler Feed in A Laboratory Scale Circulated Thermal Bath

    • Poultry Science
    • This study compares kinetic parameters of Salmonella and the surrogate Enterococcus faecium in mash broiler feed during thermal inactivation. Two-gram samples of mash broiler feed were added into a filtered sample bag and inoculated with nalidixic acid (NaL, 200 ppm) resistant S. Typhimurium or E.

      • Bacterial pathogens
      • Salmonella
  5. wecB Gene of Salmonella Gallinarum Plays a Critical Role in Systemic Infection of Fowl Typhoid

    • Frontiers in Microbiology
    • Salmonella enterica serovar Gallinarum (S. Gallinarum) is a host-specific pathogen causing fowl typhoid, a severe systemic infection in poultry, which leads to substantial economic losses due to high morbidity and mortality in many developing countries. However, less is known about the pathogenic characteristics and mechanism of S. Gallinarum-induced systemic infection in chickens. In this study, we deleted the S.

      • Bacterial pathogens
      • Salmonella
  6. Similar Carcass Surface Microbiota Observed Following Primary Processing of Different Pig Batches

    • Frontiers in Microbiology
    • Bacterial contamination during meat processing is a concern for both food safety and for the shelf life of pork meat products. The gut microbiota of meat-producing animals is one of the most important sources of surface contamination of processed carcasses. This microbiota is recognized to vary between pigs from different farms and could thus be reflected on the bacterial contamination of carcasses at time of processing.

      • Bacterial pathogens
      • Salmonella
      • Shigella
  7. A risk assessment model for Salmonella spp. in swine carcasses

    • EFSA Journal
    • EFSA Journal, Volume 20, Issue S1, May 2022. Salmonellosis is one of the most important food-borne outbreaks that occurs in the EU/EEA. From the first production stages at slaughter, meat is susceptible to spoilage and can be a substrate for the pathogenic microorganisms growth. Among the pathogens, the presence of Salmonella is mainly due to mishandling during the evisceration stage.

      • Bacterial pathogens
      • Salmonella
  8. Bacteriophage therapy of human restricted Salmonella Species‐ A study in a surrogate bacterial and animal model

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology, Accepted Article. Salmonella Typhi has been an important human restricted pathogen from time immemorial, and unfortunately, the indiscriminate use of antibiotics has induced the emergence of Multidrug-resistance in S. Typhi. Bacteriophage therapy may be a possible alternative in countering antimicrobial resistance.

      • Bacterial pathogens
      • Salmonella
  9. Dual transcriptome based reconstruction of Salmonella-human integrated metabolic network to screen potential drug targets

    • PLOS ONE
    • by Kadir Kocabaş, Alina Arif, Reaz Uddin, Tunahan Çakır Salmonella enterica serovar Typhimurium (S. Typhimurium) is a highly adaptive pathogenic bacteria with a serious public health concern due to its increasing resistance to antibiotics. Therefore, identification of novel drug targets for S. Typhimurium is crucial. Here, we first created a pathogen-host integrated genome-scale metabolic network by combining the metabolic models of human and S.

      • Bacterial pathogens
      • Salmonella
  10. Molecular diagnostics and next-generation sequencing reveal real etiological characteristics of invasive Salmonella infection in febrile illness in Freetown, Sierra Leone

    • Emerging Microbes & Infections
    • Invasive Salmonella infection, which can cause typhoid/paratyphoid fever and invasive non-typhoidal salmonellosis, is a public health burden in Africa. Accurate diagnosis and etiological characterization are required to conduct prevalence and risk estimations for Salmonella infection; however, the utilization of optimal techniques and surveillance data are still insufficient.

      • Bacterial pathogens
      • Salmonella
  11. Untargeted Metabolomics Approach of Cross-Adaptation in Salmonella Enterica Induced by Major Compounds of Essential Oils

    • Frontiers in Microbiology
    • Cross-adaptation phenomena in bacterial populations, induced by sublethal doses of antibacterial solutions, are a major problem in the field of food safety. In this regard, essential oils and their major compounds appear as an effective alternative to common sanitizers in food industry environments.

      • Bacterial pathogens
      • Salmonella
  12. Directly interface microreaction tube and test strip for the Detection of Salmonella in food with combined isothermal amplification and lateral flow assay

    • Food Microbiology
    • Salmonella is a common foodborne bacterial pathogen that leads to severe illness or even death. The recommended method for Salmonella detection relies on the culture and has a long turnaround time of up to ∼1 week. In this study, we have developed a molecular assay that detects Salmonella in food by targeting the invA gene using loop mediated isothermal amplification (LAMP) and lateral flow assay (LFA).

      • Bacterial pathogens
      • Salmonella
  13. Research Note: Persistent Salmonella problems in slaughterhouses related to clones linked to poultry companies

    • Poultry Science
    • Salmonellosis remains one of the main foodborne zoonoses in Europe, with poultry products as the main source of human infections. The slaughterhouse has been identified as a potential source for Salmonella contamination of poultry meat. Despite the mandatory programme of the EU, there are companies with persistent Salmonella that are unable to remove the bacteria from their processing environment, compromising the entire production line.

      • Bacterial pathogens
      • Salmonella
  14. Dipping fresh‐cut apples in citric acid before plasma‐integrated low‐pressure cooling improves Salmonella and polyphenol oxidase inactivation

    • Journal of the Science of Food and Agriculture
    • Journal of the Science of Food and Agriculture, Volume 102, Issue 8, Page 3425-3434, June 2022. BACKGROUND Ready-to-eat fruit and vegetable products have gained tremendous popularity in recent years. The main challenges associated with these minimally processed products are their short shelf life and high food safety concerns.

      • Bacterial pathogens
      • Salmonella
  15. Hesperidin-, Curcumin-, and Amphotericin B- Based Nano-Formulations as Potential Antibacterials

    • Antibiotics
    • To combat the public health threat posed by multiple-drug-resistant (MDR) pathogens, new drugs with novel chemistry and modes of action are needed.

      • Bacterial pathogens
      • Bacillus cereus
      • Salmonella
      • Staphylococcus aureus
  16. Evaluation of Potential for Butyl and Heptyl Para-Hydroxybenzoate Enhancement of Thermal Inactivation of Cronobacter sakazakii during Rehydration of Powdered Infant Powdered Infant Formula and Non-Fat Dry Milk.

    • Prior studies have demonstrated that parabens enhanced the thermal inactivation of foodborne pathogens including Cronobacter sakazakii , Salmonella enterica serotype Typhimurium, Escherichia coli O157:H7 and Listeria monocytogenes in model systems. However, there have been few studies looking at this phenomenon in actual food systems. The current study evaluated the potential enhancement of thermal inactivation of C.

      • Bacterial pathogens
      • Cronobacter
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Salmonella
  17. Detection of Zoonotic Bacteria and Paragonimus kellicotti in Red Swamp Crayfish (Procambarous clarkii) and The Assessment of Traditional Crayfish Boils

    • Studies on red swamp crayfish ( Procambarus clarkii ) outside of the United States confirm a variety of zoonotic pathogens, but in the $200 million dollar US commercial crayfish industry it is unknown if these same pathogens occur, demonstrating a need to evaluate this consumer commodity. The study objectives were to evaluate specific zoonotic pathogens present on red swamp crayfish ( P.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  18. Temperature, Time, and Type, Oh My! Key Environmental Factors Impacting the Recovery of Salmonella Typhimurium, Listeria monocytogenes, and Tulane Virus from Surfaces

    • Environmental monitoring (EM) programs are designed to detect the presence of pathogens in food manufacturing environments with the goal of preventing microbial contamination of food. Nevertheless, limited knowledge exists regarding the influence of environmental conditions on microbial recovery during EM. This study utilizes a commercially-available polyurethane foam (PUF) EM tool to determine the influence of environmental factors on the recovery of foodborne pathogens.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  19. Probe-free nanosensor for the detection of Salmonella using gold nanorods as an electroactive modulator

    • Food Chemistry
    • Salmonellosis is a symptomatic infection, a foodborne disease, caused by Salmonella that enters the body through the ingestion of contaminated food. In this study, a novel electrochemical biosensor integrated with gold nanorods (GNRs) was used to explore the interaction between in-house generated antibodies with Salmonella serovars.

      • Bacterial pathogens
      • Salmonella
  20. Pharmacokinetics and Pharmacodynamics of Colistin Combined With Isopropoxy Benzene Guanidine Against mcr-1-Positive Salmonella in an Intestinal Infection Model

    • Frontiers in Microbiology
    • Plasmid-borne colistin resistance mediated by mcr-1 is a growing problem, which poses a serious challenge to the clinical application of colistin for Gram-negative bacterial infections. Drug combination is one of the effective strategies to treat colistin-resistant bacteria. Here, we found a guanidine compound, namely, isopropoxy benzene guanidine (IBG), which boosted the efficacy of colistin against mcr-1-positive Salmonella.

      • Bacterial pathogens
      • Salmonella
  21. Polyclonal hen egg yolk antibodies could confer passive protection against Salmonella serotypes in broiler chicks

    • Journal of Food Safety
    • Journal of Food Safety, EarlyView. Non-typhoidal Salmonella serotypes continue to be major food safety and public health threats worldwide. In the era of emerging antimicrobial resistance, it is imperative to search for alternative strategies of infection control. Present study deals with passive protection of young chicks using polyclonal egg yolk antibodies (IgY).

      • Bacterial pathogens
      • Salmonella
  22. Modeling the invasion of human small intestinal epithelial‐like cells by Salmonella enterica Typhimurium and Listeria monocytogenes using Bayesian inference

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology, Accepted Article. In order to develop a mechanistic bacterial dose-response model, based on the concept of Key Events Dose-Response Framework (KEDRF), this study aimed to investigate the invasion of intestinal model cells (Caco-2) by Salmonella Typhimurium and Listeria monocytogenes and described the behavior of both pathogens as a mathematical model using Bayesian inference.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
  23. Whole Genome Sequencing, Antibiotic Resistance, and Epidemiology Features of Nontyphoidal Salmonella Isolated From Diarrheic Children: Evidence From North China

    • Frontiers in Microbiology
    • Nontyphoidal Salmonella (NTS) in children remains a growing burden on public health and often causes children to be hospitalized with diarrheic symptoms. In this work, 260 strains of human Salmonella isolated from Jilin, China were characterized by serotypes and antimicrobial resistance using whole genome sequencing (WGS). The most prevalent serotype was Salmonella enteritidis (47.3%), followed by S. I 4,[5],12:i:- (33.1%), and Salmonella Typhimurium (7.3%).

      • Bacterial pathogens
      • Salmonella
  24. Bacteriocin-Producing Probiotic Lactic Acid Bacteria in Controlling Dysbiosis of the Gut Microbiota

    • Frontiers in Cellular and Infection Microbiology
    • Several strains of lactic acid bacteria are potent probiotics and can cure a variety of diseases using different modes of actions. These bacteria produce antimicrobial peptides, bacteriocins, which inhibit or kill generally closely related bacterial strains and other pathogenic bacteria such as Listeria, Clostridium, and Salmonella. Bacteriocins are cationic peptides that kill the target cells by pore formation and the dissipation of cytosolic contents, leading to cell death.

      • Bacterial pathogens
      • Salmonella
  25. Capsaicin Potently Blocks Salmonella typhimurium Invasion of Vero Cells

    • Antibiotics
    • Salmonella typhimurium (S. typhimurium) is one of the major food and waterborne bacteria that causes several health outbreaks in the world. Although there are few antibiotics against this bacterium, some of these drugs are challenged with resistance and toxicity. To mitigate this challenge, our group explored the ethnomedicinal/herbalism knowledge about a certain spice used in Northern Ghana in West Africa against bacterial and viral infection. This plant is Capsicum chinense (C. chinense).

      • Bacterial pathogens
      • Salmonella