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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 101 - 125 of 4119

  1. Effect of Cold Atmospheric Plasma Fusion 222 nm UV and PAHP on Cold Pasteurisation of Egg Surfaces

    • Food and Bioprocess Technology
    • This study used a combination of cold atmospheric plasma (CAP) and ultraviolet (UV) 222 nm with plasma-activated hydrogen peroxide (PAHP) pre-treatment to optimise the pasteurisation of fresh eggs and to investigate their freshness quality.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  2. Curing of a field strain of Salmonella enterica serovar Infantis isolated from poultry from its highly stable pESI like plasmid

    • Journal of Microbiological Methods
    • Salmonella enterica serovar Infantis (S. infantis) is an important emerging pathogen, associated with poultry and poultry products and related to an increasing number of human infections in many countries. A concerning trend among S. infantis isolates is the presence of plasmid-mediated multidrug resistance.

      • Bacterial pathogens
      • Salmonella
  3. Risk assessment predicts most of the salmonellosis risk in raw chicken parts is concentrated in those few products with high-levels of high-virulence serotypes of Salmonella

    • Journal of Food Protection
    • Salmonella prevalence declined in U.S. raw poultry products since adopting prevalence-based Salmonella performance standards, but human illnesses did not reduce proportionally. We used Quantitative Microbial Risk Assessment (QMRA) to evaluate public health risks of raw chicken parts contaminated with different levels of all Salmonella and specific high- and low-virulence serotypes.

      • Bacterial pathogens
      • Salmonella
  4. Salmonella Typhimurium caused an unprecedentedly large foodborne outbreak in Finland in 2021

    • Zoonoses and Public Health
    • Abstract Aims Salmonella infections are significant causes of foodborne outbreaks in the European Union. This study investigates a sudden increase in gastroenteritis patients in the hospital district of Central Finland in June 2021. The primary aim was to study the outbreak's magnitude and source of the outbreak. Methods and Results Epidemiological, microbiological, environmental and traceback investigations were conducted.

      • Bacterial pathogens
      • Salmonella
  5. Impact of intense sanitization procedures on bacterial communities recovered from floor drains in pork processing plants

    • Frontiers in Microbiology
    • BackgroundPork processing plants in the United States (US) cease operations for 24–48 h every six or twelve months to perform intense sanitization (IS) using fogging, foaming, and further antimicrobial treatments to disrupt natural biofilms that may harbor pathogens and spoilage organisms.

      • Bacterial pathogens
      • Salmonella
  6. Characterization of MLST-99 Salmonella Typhimurium and the monophasic variant I:4,[5],12:i:- isolated from Canadian Atlantic coast shellfish

    • Microbiology
    • subsp. Typhimurium and its monophasic variant I 1;4,[5],12:i:- (MVST) are responsible for thousands of reported cases of salmonellosis each year in Canada, and countries worldwide. We investigated .

      • Bacterial pathogens
      • Salmonella
  7. Genetic relatedness and virulence potential of Salmonella Schwarzengrund strains with or without an IncFIB-IncFIC(FII) fusion plasmid isolated from food and clinical sources

    • Frontiers in Microbiology
    • A total of 55 food and clinical S. Schwarzengrund isolates were assayed for plasmid content, among which an IncFIB-IncFIC(FII) fusion plasmid, conferring streptomycin resistance, was detected in 17 isolates. Among the 17 isolates, 9 were food isolates primarily collected from poultry meat, and 8 clinical isolates collected from stool, urine, and gallbladder.

      • Bacterial pathogens
      • Salmonella
  8. Detection of Salmonella Pathogenicity Islands and Antimicrobial-Resistant Genes in Salmonella enterica Serovars Enteritidis and Typhimurium Isolated from Broiler Chickens

    • Antibiotics
    • Rapid growth in commercial poultry production is one of the major sources of Salmonella infections that leads to human salmonellosis. The two main Salmonella enterica serovars associated with human salmonellosis are enteritidis and typhimurium. The aim of this study was to determine the prevalence of S. enterica serovars Enteritidis and S. Typhimurium as well as their Salmonella pathogenicity islands (SPI) and antibiotic resistance profiles in broiler chicken feces from slaughterhouses.

      • Bacterial pathogens
      • Salmonella
  9. Dust sprinkling as an effective method for infecting layer chickens with wild‐type Salmonella Typhimurium and changes in host gut microbiota

    • Environmental Microbiology Reports
    • Dust sprinkling was an effective way to experimentally colonise layer chickens with Salmonella Typhimurium. Salmonella infection with 1000 CFU/g of dust altered the gut microbiota. This model mimics Salmonella infection in the field. Abstract Role of dust in Salmonella transmission on chicken farms is not well characterised.

      • Bacterial pathogens
      • Salmonella
  10. Exploring novel peptides in adzuki bean and mung bean hydrolysates with potent antibacterial activity

    • International Journal of Food Science & Technology
    • This research underscored the crucial role of Alcalase and Flavourzyme in generating antibacterial peptides. Certain fractions of mung bean and adzuki bean protein hydrolysates contained bioactive peptides against S. aureus and S. Typhimurium. Interestingly, small cationic peptides containing lysine with an amphipathic nature were a key factor in inhibiting S. aureus.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  11. Microbiological quality and safety of non‐treated fresh and squeezed juices from supermarkets in Lleida, Spain

    • International Journal of Food Science & Technology
    • The microbial quality and safety on two types of unpasteurised juices in Lleida was evaluated. No Salmonella spp., L. monocytogenes, or E. coli were detected. Summary The growing consumption of untreated juices has increased the outbreaks related to Salmonella spp., Escherichia coli O157:H7 and Listeria monocytogenes. Although these pathogens are not in favourable conditions in fruit juices, cases of survival in acidic environments have been reported in fruit and vegetable juices.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Salmonella
  12. Rumi and Pasteurized Kareish Cheeses Are a Source of β-Lactam-Resistant Salmonella in the Nile Delta Region of Egypt: Insights into Their Incidence, AMR Pattern, Genotypic Determinants of Virulence and β-Lactam Resistance

    • Antibiotics
    • The spread of superbugs in dairy products can jeopardize global public health. To date, information on the incidence rates of virulent and β-lactams-resistant (BLR) Salmonella in cheeses from rural areas of Egypt has been lacking. Biochemical, serological, antibiotic susceptibility, and multiplex PCR (M-PCR) tests were performed to identify and characterize Salmonella isolates.

      • Bacterial pathogens
      • Salmonella
  13. Contamination of herbs and spices: A 23‐year EU RASFF notifications analysis

    • Journal of Food Safety
    • The graphical abstract presents a detailed analysis of data from the RASFF concerning herbs and spices. On the left, various herbs and spices are depicted, representing the subjects of the notifications. Below this, a pie chart categorizes the types of RASFF notifications, with border rejections constituting the majority. On the right, the graphic lists the top 10 notifying countries, countries of origin, and notified products, with chili being the most frequently reported product.

      • Bacterial pathogens
      • Salmonella
      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  14. Decontamination of egg‐associated pathogens by plasma‐activated water and hydrogen peroxide

    • Journal of Food Safety
    • Decontamination of egg‐associated pathogens using plasma‐activated water and plasma‐activated hydrogen peroxide, along with examining their characteristics and effects on egg quality. Abstract This study investigated the effectiveness of plasma‐activated water (PAW) and plasma‐activated hydrogen peroxide (PAHP) in reducing egg‐associated pathogens.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  15. Salmonella carriage and change in serovar distribution in broiler giblets at slaughterhouse level in Turkiye: first report using ISO 6579-1:2017 and ISO 6579-3:2014

    • Poultry Science
    • This study aimed to determine the prevalence and serovar distribution of salmonellae in liver, heart, and spleen (LHS) and gizzard (G) of slaughtered broilers. For this, a total of 60 sample units, comprised of 30 LHS and 30 G collected from 3 slaughterhouses, were analysed by reference methods for detection and serotyping as revised ISO 6579-1:2017 and ISO 6579-3:2014, respectively.

      • Bacterial pathogens
      • Salmonella
  16. Phage based magnetic capture method as an aid for real time RPA detection of Salmonella spp. in milk

    • Journal of Dairy Science
    • Salmonella is a major cause of foodborne diseases worldwide. Conventional rapid assays for detecting Salmonella in real samples often encounter severe matrix interference or detect the limited number of species of a genus, resulting the inaccuracy of detection.

      • Bacterial pathogens
      • Salmonella
  17. Colonization, spread and persistence of Salmonella (Typhimurium, Infantis and Reading) in internal organs of broilers

    • Poultry Science
    • Transfer of Salmonella to internal organs of broilers over a 35 d grow-out period was evaluated. A total of 360 one-day old chicks were placed in 18 floor pens of 3 groups with 6 replicate pens each. On d 0, broilers were orally challenged with a cocktail of Salmonella (equal population of marked serovars; nalidixic acid-resistant S. Typhimurium, rifampicin-resistant S.

      • Bacterial pathogens
      • Salmonella
  18. Combined effect of SAR-endolysin LysKpV475 with polymyxin B and Salmonella bacteriophage phSE-5

    • Microbiology
    • Endolysins are bacteriophage (or phage)-encoded enzymes that catalyse the peptidoglycan breakdown in the bacterial cell wall. The exogenous action of recombinant phage endolysins against Gram-positive organisms has been extensively studied. However, the outer membrane acts as a physical barrier when considering the use of recombinant endolysins to combat Gram-negative bacteria.

      • Bacterial pathogens
      • Salmonella
  19. Accumulation of resistance genes in Salmonella Typhimurium transmitted between poultry and dairy farms increases the risk to public health

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. Salmonella Typhimurium is a zoonotic pathogen that poses a major threat to public health. This generalist serotype can be found in many hosts and the environment where varying selection pressures may result in the accumulation of antimicrobial resistance determinants.

      • Bacterial pathogens
      • Salmonella
  20. Antibacterial activities of Miang extracts against selected pathogens and the potential of the tannin-free extracts in the growth inhibition of Streptococcus mutans

    • PLOS ONE
    • by Aliyu Dantani Abdullahi, Kridsada Unban, Chalermpong Saenjum, Pratthana Kodchasee, Napapan Kangwan, Hathairat Thananchai, Kalidas Shetty, Chartchai Khanongnuch Bacterial pathogens have remained a major public health concern for several decades.

      • Bacterial pathogens
      • Bacillus cereus
      • Salmonella
  21. Mild heating and ambient storage following gaseous chlorine dioxide treatment of chia seeds enhanced inactivation of Salmonella spp.

    • Food Control
    • Chlorine dioxide (ClO2) gas is widely recognized as a potent antimicrobial agent effective against various microorganisms. Chia seeds are prone to microbial contamination, and thermal treatments are not feasible due to potential quality issues. The study is aimed at investigating the effectiveness of chlorine dioxide (ClO2) gas followed by mild heat for Salmonella reduction in chia seeds.

      • Bacterial pathogens
      • Salmonella
  22. PSV-16 Effect of precision feeding and functional amino acids on immune response and protein metabolism of growing pigs raised in poor sanitary conditions

    • Journal of Animal Science
    • The activation of the immune system reduces the nutrient availability for growth and increases the variability among pigs. Functional amino acids (AA) supplementation can reduce the negative effects of immune activation. Additionally, providing daily tailored diets using individual precision feeding (IPF) was shown to account for individual variability.

      • Bacterial pathogens
      • Salmonella
  23. Antimicrobial resistance, virulence potential and genomic epidemiology of global genomes of the rare Salmonella enterica serovar Orion

    • Zoonoses and Public Health
    • Abstract Aims Our aim is to characterize through whole‐genome sequencing (WGS) the antimicrobial resistance (AMR) and heavy metal tolerance (HMT) genes content, plasmid presence, virulence potential and genomic diversity of the rare non‐typhoid Salmonella enterica serovar Orion (S. Orion) from 19 countries of the African, American, Eastern Mediterranean, European, Southeastern Asia and Western Pacific regions. Methods and Results Totally 324 S.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  24. Continuous production and recirculation of plasma‐activated water bubbles under different flow regimes for mixed‐species bacterial biofilm inactivation inside pipelines

    • Journal of Food Safety
    • The study compared the effects of the flow regimes (laminar, transitional, and turbulent), treatment time, and the volume of water and plasma‐activated water bubbles circulation on the inactivation of the mixed‐species biofilms of Salmonella Typhimurium and Aeromonas australiensis grown on the inner surfaces of the polyvinyl chloride pipes. Abstract Biofilm formation in broiler drinking water systems is a public health concern.

      • Bacterial pathogens
      • Salmonella
  25. Genome sequence, antibiotic resistance genes, and plasmids in a monophasic variant of Salmonella typhimurium isolated from retail pork

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. A Salmonella isolate from retail pork was whole genome sequenced using Illumina NovaSeq6000, with a 5,320,119 bp genome and 51.06% GC content. Several antibiotic resistance genes and plasmids, including blaTEM-1, aac(6')-IIc, IncHI2, and p0111 were obtained from subsequent analysis.

      • Bacterial pathogens
      • Salmonella