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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 151 - 175 of 4014

  1. Radiofrequency inactivation of Salmonella in black pepper and dried basil leaves using in-package steaming

    • Journal of Food Protection
    • Radiofrequency (RF) heating has been extensively studied for pasteurizing low-moisture foods. Currently, bulk foods are treated with radiofrequency; potential cross-contamination may occur during packaging of pasteurized products. As an alternative, in-package RF processing was evaluated for Salmonella inactivation on black peppercorns and dried basil leaves and prevention of cross-contamination during storage postprocessing.

      • Bacterial pathogens
      • Salmonella
  2. Surveillance of antimicrobial resistance in Escherichia coli, Salmonella, and Campylobacter recovered from laying hens, their environment and products in Canada indicated a stable level of resistance to critically important antimicrobial

    • International Journal of Food Microbiology
    • The study objective was to determine the occurrence and antimicrobial resistance (AMR) attributes of select foodborne bacteria recovered from egg-producing (layer) chickens between 2007 and 2021 using different sample matrices (Study 1: liquid whole eggs, Study 2: spent hen cecal samples,

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  3. Foodborne Pathogen Dynamics in Meat and Meat Analogues Analysed Using Traditional Microbiology and Metagenomic Sequencing

    • Antibiotics
    • Meat analogues play an increasing role in meeting global nutritional needs. However, while it is well known that meat possesses inherent characteristics that create favourable conditions for the growth of various pathogenic bacteria, much less is known about meat analogues.

      • Bacterial pathogens
      • Cronobacter
      • Listeria monocytogenes
      • Salmonella
  4. Cocoa Bean Shell Wastes for the Green Synthesis of Silver Nanoparticles with Antimicrobial Activity Against Foodborne Pathogens

    • Food and Bioprocess Technology
    • The green synthesis of silver nanoparticles offers a non-toxic, eco-friendly, economical, and efficient solution against various microorganisms. The study aimed to investigate the utilization of cocoa bean shells for the production of silver nanoparticles through green synthesis, besides its characterization and evaluation against foodborne pathogens.

      • Bacterial pathogens
      • Cronobacter
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus
  5. Extensively drug-, ciprofloxacin-, cefotaxime-, and azithromycin-resistant Salmonella enterica serovars isolated from camel meat in Egypt

    • International Journal of Food Microbiology
    • Given the great importance of Salmonella as a leading foodborne pathogen of global concern and the few available data regarding its prevalence in camel meat, the present study aimed to determine the prevalence, 

      • Bacterial pathogens
      • Salmonella
  6. Genomic and proteomic analysis of Salmonella Enteritidis isolated from a patient with foodborne diarrhea

    • World Journal of Microbiology and Biotechnology
    • Salmonella is a major cause of foodborne diseases and clinical infections worldwide. This study aimed to investigate the drug resistance, genomic characteristics, and protein expression of foodborne Salmonella in Shanxi Province. We isolated a strain of Salmonella Enteritidis from patient feces and designated it 31A. The drug resistance of 31A against 14 antibiotics was determined using an antimicrobial susceptibility test.

      • Bacterial pathogens
      • Salmonella
  7. Genomic characterization of Salmonella isolated from retail chicken and humans with diarrhea in Qingdao, China

    • Frontiers in Microbiology
    • Salmonella, especially antimicrobial resistant strains, remains one of the leading causes of foodborne bacterial disease. Retail chicken is a major source of human salmonellosis. Here, we investigated the prevalence, antimicrobial resistance (AMR), and genomic characteristics of Salmonella in 88 out of 360 (24.4%) chilled chicken carcasses, together with 86 Salmonella from humans with diarrhea in Qingdao, China in 2020.

      • Bacterial pathogens
      • Salmonella
  8. Genomic diversity of Salmonella enterica isolated from raw chicken at retail establishments in Mexico

    • International Journal of Food Microbiology
    • The genomic diversity of circulating non-typhoidal Salmonella in raw chicken was investigated in three states of central Mexico. A total of 192 S. enterica strains from chicken meat samples collected at supermarkets, fresh markets, and butcher shops were analyzed by whole-genome sequencing.

      • Bacterial pathogens
      • Salmonella
  9. Medium-term storage of calf beddings affects bacterial community and effectiveness to inactivate zoonotic bacteria

    • PLOS ONE
    • by Delphine Rapp, Colleen Ross, Vanessa Cave, Paul Maclean, Ruy Jauregui, Gale Brightwell Land-spreading of animal faecal wastes -such as animal beddings- can introduce zoonotic enteropathogens into the food system environment. The study evaluated the effectiveness of animal beddings naturally contaminated by calf manure to reduce E. coli O157:H7 or Salmonella enterica.

      • Bacterial pathogens
      • Salmonella
  10. Evaluation of universal preenrichment broth and comparison of rapid molecular methods for the detection of Salmonella from spent sprout irrigation water (SSIW)

    • International Journal of Food Microbiology
    • Sprouts and spent sprout irrigation water (SSIW) present unique challenges for the development of a Salmonella detection method in food matrices. This study aimed to compare universal preenrichment broth (UPB) and lactose broth (LB) as preenrichment media for cultural and rapid screening methods and to compare their abilities to recover Salmonella in SSIW samples from different sprout varieties (i.e., alfalfa, broccoli, and mung bean sprouts).

      • Bacterial pathogens
      • Salmonella
  11. Effect of pimenta essential oil against Salmonella Agona and Salmonella Saintpaul in ground turkey meat and nonprocessed turkey breast meat

    • Poultry Science
    • Salmonella enterica Agona (S. Agona) and Salmonella enterica Saintpaul (S. Saintpaul) are among the emerging drug-resistant Salmonella in turkey production and processing.

      • Bacterial pathogens
      • Salmonella
  12. Draft genome sequences of two Salmonella Uzaramo isolates from poultry in South Africa

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Salmonella enterica is a zoonotic pathogen and a leading cause of foodborne gastroenteritis in humans. Here, we report the draft genome sequences of two Salmonella Uzaramo isolates, which were isolated from poultry organs during routine post-mortem examination in South Africa. Currently, whole-genome sequences on Salmonella Uzaramo are scanty.

      • Bacterial pathogens
      • Salmonella
  13. The European Union One Health 2022 Zoonoses Report

    • EFSA Journal
    • Abstract This report by the European Food Safety Authority and the European Centre for Disease Prevention and Control presents the results of the zoonoses monitoring and surveillance activities carried out in 2022 in 27 Member States (MSs), the United Kingdom (Northern Ireland) and 11 non‐MSs. Key statistics on zoonoses and zoonotic agents in humans, food, animals and feed are provided and interpreted historically.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  14. Long-term exposure to food-grade disinfectants causes cross-resistance to antibiotics in Salmonella enterica serovar Typhimurium strains with different antibiograms and sequence types

    • Antimicrobial Resistance & Infection Control
    • Disinfectants are important in the food industry to prevent the transmission of pathogens. Excessive use of disinfectants may increase the probability of bacteria experiencing long-term exposure and consequent...

      • Bacterial pathogens
      • Salmonella
  15. Draft genome sequencing of a multidrug-resistant Salmonella enterica subspecies enterica serovar Typhimurium strain isolated from chicken in Bangladesh

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Herein this study, we sequenced the genome of a multidrug-resistant Salmonella enterica serovar Typhimurium strain MBR-MFRK-23 isolated from the liver tissue of a diseased layer chicken. The 4,964,854-bp draft genome comprises 50 contigs with 50.5× coverage and 52.1% GC content and is typed as S. enterica sequence type 19.

      • Bacterial pathogens
      • Salmonella
  16. Foodborne pathogen inactivation in fruit juices utilizing commercial scale high-pressure processing: Effects of acidulants and pH

    • Food Science and Technology International
    • The effects of juice pH, type of acidulant, and post-treatment refrigeration on the high-pressure processing (HPP) inactivation of Escherichia coli O157:H7, Salmonella enterica, and Listeria monocytogenes in acid beverages were evaluated. Inoculated apple, orange, and grape juices (at their original pH and adjusted to pH 4.00, 4.50, and 5.00) were treated at 550 MPa for 1 min at 5 °C.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Salmonella
  17. Suppression of pathogens in properly refrigerated raw milk

    • PLOS ONE
    • by M. E. Coleman, T. P. Oscar, T. L. Negley, M. M. Stephenson Conflicting claims exist regarding pathogen growth in raw milk. A small pilot study was designed to provide definitive data on trends for pathogen growth and decline in raw bovine milk hygienically produced for direct human consumption. An independent laboratory conducted the study, monitoring growth and decline of pathogens inoculated into raw milk.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
  18. A Novel Strategy for Reducing Salmonella Enteritidis Cross-Contamination in Ground Chicken Meat Using Thymol Nanoemulsion Incorporated in Chitosan Coatings

    • Food and Bioprocess Technology
    • This study evaluated the capability of a thymol nanoemulsion (nTHY) to reduce cross-contamination with Salmonella Enteritidis in ground chicken meat. First, an nTHY (~ 54 nm) was prepared in a high-shear speed system (rotor–stator) and proved stable, remaining below 100 nm for 30 days in storage at 4 °C. Then, a minimum inhibitory concentration assay was performed by combining S. Enteritidis with viable native bacteria from chicken meat.

      • Bacterial pathogens
      • Salmonella
  19. Role of narL gene in the pathogenesis of Salmonella Typhimurium

    • Journal of Basic Microbiology
    • Abstract Salmonella Typhimurium (STM) is a facultative anaerobe and one of the causative agents of nontyphoidal salmonellosis (NTS). Its anaerobic metabolism is enabled under the hypoxic environment that is encountered inside macrophages and the gut lumen of the host. In both of these niches, free radicals and oxidative intermediates are released by neutrophils as an inflammatory response.

      • Bacterial pathogens
      • Salmonella
  20. The genomic and epidemiological virulence patterns of Salmonella enterica serovars in the United States

    • PLOS ONE
    • by Gavin J. Fenske, Jane G. Pouzou, Régis Pouillot, Daniel D. Taylor, Solenne Costard, Francisco J. Zagmutt The serovars of Salmonella enterica display dramatic differences in pathogenesis and host preferences. We developed a process (patent pending) for grouping Salmonella isolates and serovars by their public health risk. We collated a curated set of 12,337 S. enterica isolate genomes from human, beef, and bovine sources in the US.

      • Bacterial pathogens
      • Salmonella
  21. Investigation on Pomegranate (Punica granatum) Skin as a Potentially Effective Natural Food Preservative

    • International Journal of Food Science
    • The study is aimed at estimating the possibility of using pomegranate peel extracts as a natural food preservative which was investigated in fish samples. All the extracts (cold water, hot water, and 70% methanol) have been tested against five bacteria (Escherichia coli, Staphylococcus aureus, Salmonella Typhi, Bacillus megaterium, and Bacillus subtilis) using the agar disc diffusion method. Hot water extract showed the best result against B. megaterium.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  22. Training in modern statistical methodologies and software tools for the definition and analysis of (stochastic) quantitative microbial risk assessment models with a comparison between the Hungarian and Spanish food supply chains

    • EFSA Journal
    • Abstract Human pathogenic Salmonella enterica strains have been infecting people since historical times. The original human pathogens, typhoid Salmonella strains (e.g. S. Typhi) played a huge role in the previous centuries but nowadays in the developed world the number of cases or outbreaks caused by these serotypes deceased due to the development of personal and public hygiene. Nowadays in these regions the animal‐borne zoonotic serotypes (e.g.

      • Bacterial pathogens
      • Salmonella
  23. Whole genome sequencing in the palm of your hand: how to implement a MinION Galaxy-based workflow in a food safety laboratory for rapid Salmonella spp. serotyping, virulence, and antimicrobial resistance gene identification

    • Frontiers in Microbiology
    • Introduction Whole Genome Sequencing (WGS) implementation in food safety laboratories is a significant advancement in food pathogen control and outbreak tracking. However, the initial investment for acquiring next-generation sequencing platforms and the need for bioinformatic skills represented an obstacle for the widespread use of WGS.

      • Bacterial pathogens
      • Salmonella
  24. Detection of zoonotic enteropathogens in captive large felids in Italy

    • Zoonoses and Public Health
    • Abstract Aims Within the One Health paradigm, infectious disease surveillance have been developed for domestic and wild animals, leaving the role of captive non‐domestic populations, especially felids in zoos and circuses, less explored. This study addresses the proximity of these captive animals to urban areas, necessitating focused monitoring for potential zoonotic enteropathogens.

      • Bacterial pathogens
      • Salmonella
      • Parasites
      • Giardia lamblia
      • Toxoplasma gondii
  25. Prolonging broccoli shelf life through controlled release of plai essential oil using palm wood sachet as a novel absorbent material with reusable properties

    • Journal of Food Science
    • Abstract Palm wood powder derived from palm wood waste was utilized as a novel absorbent material. The investigation involved exploring its pore structure and size to achieve the controlled release of bioactive compounds from plai oil, providing protection against pathogenic bacteria and thereby extending the shelf life of broccoli. The palm wood sachet was prepared before being placed into the broccoli bag.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus