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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 26 - 50 of 1284

  1. Viable Campylobacter jejuni on eggshells and its potential to cross-contaminate egg white and yolk when using a manual separation technique, determined by culture and propidium monoazide (PMA) qPCR

    • Journal of Food Protection
    • Manual separation of egg yolk from egg white using the eggshell is common practice in private households. For this, the egg is cracked and both components are separated by passing the egg yolk back and forth between the two halves of the eggshell, allowing the egg white to drip down while the egg yolk remains in the shell.

      • Bacterial pathogens
      • Campylobacter
  2. Molecular characterization of Campylobacter spp. isolates obtained from commercial broilers and native chickens in Southern Thailand using whole genome sequencing

    • Poultry Science
    • Chickens are the primary reservoirs of Campylobacter spp., mainly C. jejuni and C. coli, that cause human bacterial gastrointestinal infections. However, genomic characteristics and antimicrobial resistance of Campylobacter spp. in low- to middle-income countries need more comprehensive exploration. This study aimed to characterize 21 C. jejuni and 5 C.

      • Bacterial pathogens
      • Campylobacter
  3. Interventions to reduce Salmonella and Campylobacter during chilling and post-chilling stages of poultry processing: a systematic review and meta-analysis

    • Poultry Science
    • Salmonella and Campylobacter are common bacterial hazards causing foodborne illnesses worldwide. A large proportion of Salmonella and Campylobacter illnesses are attributed to contaminated poultry products that are mishandled or under cooked. Processing interventions such as chilling and post-chill dip are critical to reducing microbial contamination of poultry.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  4. Prevalence and Antimicrobial Resistance of Campylobacter in Conventional and No Antibiotics Ever Broiler Farms

    • Journal of Food Protection
    • Campylobacter is a leading cause of enteric disease worldwide. No antibiotics ever (NAE) poultry has become increasingly popular, yet little is known about the incidence and antimicrobial resistance (AMR) of Campylobacter in this production system. This study was conducted to determine the prevalence, concentration, and AMR of Campylobacter in conventional (CV) and NAE-raised broilers.

      • Bacterial pathogens
      • Campylobacter
  5. Status quo: Levels of Campylobacter spp. and hygiene indicators in German slaughterhouses for broiler and Turkey

    • International Journal of Food Microbiology
    • Poultry is a common reservoir for Campylobacter and a main source for human campylobacteriosis. With broiler being the predominant poultry for food production, most food safety related research is conducted for this species, for turkey, few studies are available. Although animals are typically colonized at the farm level, the slaughtering process is considered an important factor in re- and cross-contamination.

      • Bacterial pathogens
      • Campylobacter
  6. The antimicrobial effect of eugenol against Campylobacter jejuni on experimental raw chicken breast meat model

    • Journal of Food Safety
    • Graphıcal Abstract The antimicrobial activity of eugenol against Campylobacter jejuni in a food model system. Abstract Campylobacter jejuni is the predominant bacterial cause of gastroenteritis, the main cause of foodborne deaths. Currently, Campylobacter is a common foodborne pathogen found in poultry; thus, there is a need for the development of novel intervention strategies. The aim of the study was to examine the effect of eugenol on C. jejuni load in an experimental chicken meat model.

      • Bacterial pathogens
      • Campylobacter
  7. Impact of precursor-derived peracetic acid on post-weaning diarrhea, intestinal microbiota, and predicted microbial functional genes in weaned pigs

    • Frontiers in Microbiology
    • Post-weaning diarrhea affects piglets in the nursery phase of production, leading to a substantial impact both at the farm and financial levels. The multifactorial etiology of this disease includes housing conditions, pig genetics, microbial composition, and metagenomic assets. Among the common therapeutic approaches, the widely used zinc oxide underwent a European Union ban in 2022 due to its negative environmental impact and correlation to increased antimicrobial resistance.

      • Bacterial pathogens
      • Campylobacter
  8. High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA

    • Applied Microbiology and Biotechnology
    • Infections caused by Campylobacter spp. are a major cause of severe enteritis worldwide. Multifactorial prevention strategies are necessary to reduce the prevalence of Campylobacter. In particular, antiadhesive strategies with specific inhibitors of early host–pathogen interaction are promising approaches to reduce the bacterial load.

      • Bacterial pathogens
      • Campylobacter
  9. Pioneering gut health improvements in piglets with phytogenic feed additives

    • Applied Microbiology and Biotechnology
    • This research investigates the effects of phytogenic feed additives (PFAs) on the growth performance, gut microbial community, and microbial metabolic functions in weaned piglets via a combined 16S rRNA gene amplicon and shotgun metagenomics approach. A controlled trial was conducted using 200 pigs to highlight the significant influence of PFAs on gut microbiota dynamics.

      • Bacterial pathogens
      • Campylobacter
  10. Improving occupational health surveillance for enteric infections

    • Zoonoses and Public Health
    • Abstract Aims Enteric pathogens with a livestock reservoir pose a unique risk to people in occupations with regular contact with animals. However, public health surveillance of occupational exposures is inadequate, with surveillance for occupation typically focusing on the risk of transmission and the need for worker exclusion, rather than workplace exposures.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
      • Parasites
      • Cryptosporidium parvum
  11. Added insult to injury? The response of meat-associated pathogens to proposed antimicrobial interventions

    • Applied Microbiology and Biotechnology
    • Modern requirements for ‘green label’ meat products have led to the design of novel antimicrobial innovations which prioritise quality, safety and longevity. Plasma-functionalised water (PFW), ultraviolet light and natural antimicrobial compositions have been investigated and optimised for control of foodborne pathogens like Campylobacter jejuni and Salmonella enterica serovar Typhimurium.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  12. Draft genome sequences of Campylobacter species isolated from the cecal contents of broiler chickens

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Here, we report the draft genomes of 10 Campylobacter strains isolated from the cecal contents of market-age broiler chickens naturally colonized with Campylobacter. Through a comprehensive analysis of these draft genomes, we have unveiled their core genetic elements and several antimicrobial resistance genes.

      • Bacterial pathogens
      • Campylobacter
  13. Integrating meta-analysis with a quantitative microbial risk assessment model to investigate Campylobacter contamination of broiler carcasses

    • Food Research International
    • This study investigated the prevalence and associated risk factors of Campylobacter in South Korean broilers using a random-effects meta-analysis. Subsequently, to facilitate the design of preventive measures, the prevalence estimate from the meta-analysis was incorporated into a stochastic risk assessment model to quantify the Campylobacter contamination levels on broiler carcasses.

      • Bacterial pathogens
      • Campylobacter
  14. Surveillance of antimicrobial resistance in Escherichia coli, Salmonella, and Campylobacter recovered from laying hens, their environment and products in Canada indicated a stable level of resistance to critically important antimicrobial

    • International Journal of Food Microbiology
    • The study objective was to determine the occurrence and antimicrobial resistance (AMR) attributes of select foodborne bacteria recovered from egg-producing (layer) chickens between 2007 and 2021 using different sample matrices (Study 1: liquid whole eggs, Study 2: spent hen cecal samples,

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  15. Circular intermediate-mediated horizontal transfer of the chromosome-encoded cfr(C) gene in multi-drug resistant Campylobacter coli from swine sources

    • Frontiers in Microbiology
    • Campylobacter is a major zoonotic pathogen that causes gastrointestinal and, rarely, immune diseases in humans. The antimicrobial-resistance gene cfr(C) carried by Campylobacter and is a cfr-like gene that targets bacterial 23S rRNA through A2503 methylation. cfr(C) confers cross-resistance to five antimicrobial classes (PhLOPSA), including lincosamide, streptogramin A, and pleuromutilin, which are classified as critically important antimicrobials to human by the World Health Organization.

      • Bacterial pathogens
      • Campylobacter
  16. Campylobacter species and genotype distribution in Finnish beef liver – Retail liver juice ideal for isolation and quantification

    • International Journal of Food Microbiology
    • Campylobacteriosis, primarily caused by Campylobacter jejuni and C. coli, is the main bacterial zoonosis worldwide. While poultry is recognized as the main reservoir, bovines are considered another important reservoir for Campylobacter spp.

      • Bacterial pathogens
      • Campylobacter
  17. The European Union One Health 2022 Zoonoses Report

    • EFSA Journal
    • Abstract This report by the European Food Safety Authority and the European Centre for Disease Prevention and Control presents the results of the zoonoses monitoring and surveillance activities carried out in 2022 in 27 Member States (MSs), the United Kingdom (Northern Ireland) and 11 non‐MSs. Key statistics on zoonoses and zoonotic agents in humans, food, animals and feed are provided and interpreted historically.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  18. Suppression of pathogens in properly refrigerated raw milk

    • PLOS ONE
    • by M. E. Coleman, T. P. Oscar, T. L. Negley, M. M. Stephenson Conflicting claims exist regarding pathogen growth in raw milk. A small pilot study was designed to provide definitive data on trends for pathogen growth and decline in raw bovine milk hygienically produced for direct human consumption. An independent laboratory conducted the study, monitoring growth and decline of pathogens inoculated into raw milk.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
  19. Cold Tolerance in Campylobacter jejuni and its Impact on Food Safety

    • Food Research International
    • Campylobacter jejuni is a major cause of foodborne illnesses worldwide and is primarily transmitted to humans through contaminated poultry meat. To control this pathogen, it is critical to understand its cold tolerance because poultry products are usually distributed in the cold chain. However, there is limited information regarding how this thermotolerant, microaerophilic pathogen can survive in cold and aerobic environments in the poultry cold chain.

      • Bacterial pathogens
      • Campylobacter
  20. Genotypic characterization, antimicrobial susceptibility and virulence determinants of Campylobacter jejuni and Campylobacter coli isolated from pastured poultry farms

    • Frontiers in Microbiology
    • Aim  Campylobacter is the leading bacterial pathogen that causes foodborne illnesses worldwide. Pasture farming is regarded as an important source of agricultural production for small farming communities. Consumer preference for pasture-raised animal products has increased; however, there is a paucity of information on the microbiological quality of pasture-raised poultry products.

      • Bacterial pathogens
      • Campylobacter
  21. Seasonal variation in the prevalence and antimicrobial resistance of Campylobacter species in milk and milk products in Ethiopia

    • International Dairy Journal
    • Seasonal variation in the prevalence and antimicrobial resistance of Campylobacter species in the Ethiopian dairy value chain was investigated. Dairy food samples (456) were collected in the dry and wet seasons in three regions of Ethiopia. Campylobacter species were detected in 20% of samples collected in the wet season. The overall prevalence did not differ significantly between the wet and dry seasons.

      • Bacterial pathogens
      • Campylobacter
  22. 281 Effects of Corynebacterium Glutamicum Cell Mass Supplementation on Modulation of Mucosa-Associated Microbiota to Intestinal Health of Nursery Pigs

    • Journal of Animal Science
    • The objectives were to evaluate the effects of Corynebacterium glutamicum cell mass (CGCM) supplementation, replacing blood plasma in diets, on the gene expressions of biomarkers associated with peptidoglycan and their correlation with intestinal health in nursery pigs. Weaned pigs (n = 32) were allotted to 4 dietary treatments based on the randomized complete block design with initial BW as blocks.

      • Bacterial pathogens
      • Campylobacter
  23. Prevalence and Antimicrobial Resistance of Salmonella Dublin and Thermotolerant Campylobacter in Liver from Veal Calves in Québec, Canada

    • Foodborne Pathogens and Disease
    • Salmonella Dublin and Campylobacter spp. are two foodborne pathogens of importance. A small number of studies reported that consumption of veal liver was associated with an increased risk of human illness from these two pathogens.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  24. A comprehensive review of the applications of bacteriophage-derived endolysins for foodborne bacterial pathogens and food safety: recent advances, challenges, and future perspective

    • Frontiers in Microbiology
    • Foodborne diseases are caused by food contaminated by pathogenic bacteria such as Escherichia coli, Salmonella, Staphylococcus aureus, Listeria monocytogenes, Campylobacter, and Clostridium, a critical threat to human health. As a novel antibacterial agent against foodborne pathogens, endolysins are peptidoglycan hydrolases encoded by bacteriophages that lyse bacterial cells by targeting their cell wall, notably in Gram-positive bacteria due to their naturally exposed peptidoglycan layer.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus
  25. Fecal Microbiota Transplantation Reduces Campylobacter jejuni Colonization in Young Broiler Chickens Challenged by Oral Gavage but Not by Seeder Birds

    • Antibiotics
    • Campylobacter spp., particularly C. jejuni and C. coli, are major food safety concerns, transmitted to humans mainly via contaminated poultry meat. In a previous study, we found that some commercial broiler farms consistently produced Campylobacter-free flocks while others consistently reared Campylobacter-colonized flocks, and significant differences in the gut microbiota compositions between the two types of farm categories were revealed.

      • Bacterial pathogens
      • Campylobacter