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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1276 - 1300 of 1315

  1. Temporal patterns of Campylobacter contamination on chicken and their relationship to campylobacteriosis cases in the United States

    • International Journal of Food Microbiology
    • Publication date: 2 September 2015
      , Volume 208
      Author(s): Michael S. Williams , Neal J. Golden , Eric D. Ebel , Emily T. Crarey , Heather P. Tate

      • Bacterial pathogens
      • Campylobacter
  2. Real-time PCR detection of Campylobacter spp.: A comparison to classic culturing and enrichment

    • Food Microbiology
    • Publication date: October 2015
      , Volume 51
      Author(s): P. de Boer , H. Rahaoui , R.J. Leer , R.C. Montijn , J.M.B.M. van der Vossen

      • Bacterial pathogens
      • Campylobacter
  3. Antimicrobial Resistance Profiles of Campylobacter spp. Isolated from Broiler Chicken Meat of Estonian, Latvian and Lithuanian Origin at Estonian Retail Level and from Patients with Severe Enteric Infections in Estonia

    • Zoonoses and Public Health
    • The resistance patterns of Campylobacter spp. isolated from retail broiler chicken meat originating either from Estonia, Lithuania or Latvia collected in Estonia were determined. Additionally, in collaboration with the laboratories of several Estonian hospitals, antimicrobial susceptibility patterns were determined for Campylobacter isolates from patients with severe Campylobacter enteric infections. The isolates were identified at the species level by the PCR method.

      • Campylobacter
      • Bacterial pathogens
  4. Heat Shock-Enhanced Conjugation Efficiency in Standard Campylobacter jejuni Strains [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • Campylobacter jejuni, the leading bacterial cause of human gastroenteritis in the United States, displays significant strain diversity due to horizontal gene transfer. Conjugation is an important horizontal gene transfer mechanism contributing to the evolution of bacterial pathogenesis and antimicrobial resistance. It has been observed that heat shock could increase transformation efficiency in some bacteria. In this study, the effect of heat shock on C.

      • Bacterial pathogens
      • Campylobacter
  5. Pyrosequencing reveals shifts in the bacterial epimural community relative to dietary concentrate amount in goats

    • Journal of Dairy Science
    • Publication date: Available online 4 June 2015

      Author(s): S.U. Wetzels , E. Mann , B.U. Metzler-Zebeli , M. Wagner , F. Klevenhusen , Q. Zebeli , S. Schmitz-Esser

      • Bacterial pathogens
      • Campylobacter
  6. Detection of Campylobacter in 100 commercial flocks-Evaluation of plating media and filtration method

    • Journal of Applied Poultry Research
    • Campylobacter is a natural member of the gut microflora in many commercial broilers and as such can become a contaminant on edible surfaces during processing. Culturing gut contents or feces can be a means to determine flock status prior to live-haul. The wide variety of non-Campylobacter background bacteria in these complex samples contaminates growth media and can make it very difficult to isolate Campylobacter.

      • Campylobacter
      • Bacterial pathogens
  7. Pathogen re-colonization of in-house composted and noncomposted broiler litter

    • Journal of Applied Poultry Research
    • In-house litter composting has been reintroduced to the industry and shown to reduce bacteria by as much as 2 orders of magnitude. Other industries have demonstrated that pathogens can recolonize a waste-residual when microbial competition has been reduced or inhibited following composting. Poultry growers, in the process of shifting to in-house composting for pathogen control, should be aware of this potential problem.

      • Campylobacter
      • Bacterial pathogens
  8. On farm prevention of Campylobacter and Salmonella: lessons learned from basic biosecurity interventions

    • Journal of Applied Poultry Research
    • An observational study examining prevalence of Campylobacter and Salmonella in environmental samples and biosecurity interventions to mitigate these 2 pathogens was performed for 3 consecutive flocks on a commercial broiler farm in northeast Georgia. Monitoring was performed first on a baseline flock for which no interventions or treatments were undertaken.

      • Campylobacter
      • Bacterial pathogens
      • Salmonella
  9. Delineation of genetic relatedness and population structure of oral and enteric Campylobacter concisus strains by analysis of housekeeping genes [STANDARD]

    • Microbiology
    • Campylobacter concisus is an oral bacterium that has been shown to be associated with inflammatory bowel disease (IBD). In this study we examined clusters of oral C. concisus strains isolated from patients with IBD and healthy controls by analysing the six housekeeping genes that we previously described. In addition, we investigated the population structure of C. concisus strains.

      • Campylobacter
      • Bacterial pathogens
  10. Effectiveness of inactivation of foodborne pathogens during simulated home pan frying of steak, hamburger or meat strips

    • International Journal of Food Microbiology
    • Publication date: 3 August 2015
      , Volume 206
      Author(s): Evy Lahou , Xiang Wang , Elien De Boeck , Elien Verguldt , Annemie Geeraerd , Frank Devlieghere , Mieke Uyttendaele

      • Campylobacter
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Bacterial pathogens
  11. A comparison of fluctuations of Campylobacter and Escherichia coli concentrations on broiler chicken carcasses during processing in two slaughterhouses

    • International Journal of Food Microbiology
    • Publication date: 16 July 2015
      , Volume 205
      Author(s): Ewa Pacholewicz , Arno Swart , Maarten Schipper , Betty G.M. Gortemaker , Jaap A. Wagenaar , Arie H. Havelaar , Len J.A. Lipman

      • Campylobacter
      • Bacterial pathogens
  12. First Case Report of Campylobacter volucris Bacteremia in an Immunocompromised Patient [Case Reports]

    • Journal of Clinical Microbiology
    • We report a case of Campylobacter volucris bacteremia in an immunocompromised patient with polycythemia vera and alcoholic liver cirrhosis. To our knowledge, this is the first case report in which this organism has been isolated from a human clinical specimen.

      • Campylobacter
      • Bacterial pathogens
  13. PerR controls oxidative stress defence and aerotolerance, but not motility-associated phenotypes of Campylobacter jejuni [STANDARD]

    • Microbiology
    • The foodborne bacterial pathogen Campylobacter jejuni is an obligate microaerophile, which is exposed to atmospheric oxygen during transmission through the food chain. Survival under aerobic conditions requires the concerted control of oxidative stress systems, which in C. jejuni are intimately connected with iron metabolism via the PerR and Fur regulatory proteins. Here we have characterised the roles of C.

      • Bacterial pathogens
      • Campylobacter
  14. Prevalence of Campylobacter spp. in Retail Chicken, Turkey, Pork, and Beef Meat in Poland between 2009 and 2013

    • Journal of Food Protection
    • Korsak, Dorota et al. The purpose of the present study was to determine the prevalence of thermophilic Campylobacter in poultry, pork, and beef meat at the retail level and to identify the main categories of meat representing the most significant reservoirs of Campylobacter. A monitoring study was conducted throughout Poland from 2009 to 2013. A total of 1,700 fresh meat samples were collected from supermarkets, large retail outlets, and smaller stores.

      • Campylobacter
      • Bacterial pathogens
  15. Gene Loss and Lineage-Specific Restriction-Modification Systems Associated with Niche Differentiation in the Campylobacter jejuni Sequence Type 403 Clonal Complex [Evolutionary and Genomic Microbiology]

    • Applied and Environmental Microbiology
    • Campylobacter jejuni is a highly diverse species of bacteria commonly associated with infectious intestinal disease of humans and zoonotic carriage in poultry, cattle, pigs, and other animals. The species contains a large number of distinct clonal complexes that vary from host generalist lineages commonly found in poultry, livestock, and human disease cases to host-adapted specialized lineages primarily associated with livestock or poultry.

      • Campylobacter
      • Bacterial pathogens
  16. Genetic diversity and host associations in Campylobacter jejuni from human cases and broilers in 2000 and 2008.

    • Veterinary Microbiology
    • Publication date: Available online 4 May 2015

      Author(s): Petra Griekspoor , Eva Olsson Engvall , Britt Åkerlind , Björn Olsen , Jonas Waldenström

      • Campylobacter
      • Bacterial pathogens
  17. Campylobacter jejuni contamination of broiler carcasses: Population dynamics and genetic profiles at slaughterhouse level

    • Food Microbiology
    • Publication date: September 2015
      , Volume 50
      Author(s): Igor Gruntar , Majda Biasizzo , Darja Kušar , Mateja Pate , Matjaž Ocepek

      • Bacterial pathogens
      • Campylobacter
  18. Impact of Disinfectant Wipes on the Risk of Campylobacter jejuni Infection During Raw Chicken Preparation in Domestic Kitchens

    • Journal of Applied Microbiology
    • Aims
      In the present study, we conducted a quantitative microbial risk assessment forecasting the exposure to Campylobacter jejuni contaminated surfaces during preparation of chicken fillets and how using a disinfectant wipe intervention to clean a contaminated work area decreases the risk of infection following the preparation of raw chicken fillet in a domestic kitchen.

      • Bacterial pathogens
      • Campylobacter
  19. Microbial food safety: Potential of DNA extraction methods for use in diagnostic metagenomics

    • Journal of Microbiological Methods
    • Publication date: Available online 1 May 2015

      Author(s): Mathilde H. Josefsen , Sandra C. Andersen , Julia Christensen , Jeffrey Hoorfar

      • Bacterial pathogens
      • Campylobacter
  20. Taxonomic Identification of Ruminal Epithelial Bacterial Diversity during Rumen Development in Goats [Microbial Ecology]

    • Applied and Environmental Microbiology
    • Understanding of the colonization process of epithelial bacteria attached to the rumen tissue during rumen development is very limited. Ruminal epithelial bacterial colonization is of great significance for the relationship between the microbiota and the host and can influence the early development and health of the host.

      • Bacterial pathogens
      • Campylobacter
  21. Molecular Survey of Occurrence and Quantity of Legionella spp., Mycobacterium spp., Pseudomonas aeruginosa and Amoeba Hosts in Municipal Drinking Water Storage Tank Sediments

    • Journal of Applied Microbiology
    • Aim
      To examine the occurrence and quantity of potential pathogens and an indicator of microbial contamination in the sediments of municipal drinking water storage tanks (MDWSTs), given the absence of such data across the United States.

      • Bacterial pathogens
      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
      • Campylobacter
  22. Multicenter Evaluation of the BD Max Enteric Bacterial Panel PCR Assay for Rapid Detection of Salmonella spp., Shigella spp., Campylobacter spp. (C. jejuni and C. coli), and Shiga Toxin 1 and 2 Genes [Bacteriology]

    • Journal of Clinical Microbiology
    • Diarrhea due to enteric bacterial pathogens causes significant morbidity and mortality in the United States and worldwide. However, bacterial pathogens may be infrequently identified. Currently, culture and enzyme immunoassays (EIAs) are the primary methods used by clinical laboratories to detect enteric bacterial pathogens.

      • Salmonella
      • Shigella
      • Bacterial pathogens
      • Campylobacter
  23. Effect of extending processing plant operating time on the microbiological quality and safety of broiler carcasses

    • Food Control
    • Publication date: October 2015
      , Volume 56
      Author(s): Anthony Pavic , Julian M. Cox , Jeremy W. Chenu

      • Bacterial pathogens
      • Campylobacter
  24. Effect of Oxygen Stress on Growth and Survival of Clostridium perfringens, Campylobacter jejuni, and Listeria monocytogenes under Different Storage Conditions

    • Journal of Food Protection
    • Al-Qadiri, Hamzah et al. This study investigated the growth and survival of three foodborne pathogens (Clostridium perfringens, Campylobacter jejuni, and Listeria monocytogenes) in beef (7% fat) and nutrient broth under different oxygen levels. Samples were tested under anoxic (<0.5%), microoxic (6 to 8%), and oxic (20%) conditions during storage at 7°C for 14 days and at 22°C for 5 days. Two initial inoculum concentrations were used (1 and 2 log CFU per g of beef or per ml of broth).

      • Campylobacter
      • Bacterial pathogens
  25. Cytochrome c biogenesis in Campylobacter jejuni requires cytochrome c6 (CccA; Cj1153) to maintain apocytochrome cysteine thiols in a reduced state for haem attachment

    • Molecular Microbiology
    • The microaerophilic food-borne pathogen Campylobacter jejuni uses complex cytochrome-rich respiratory chains for growth and host colonization. Cytochrome c biogenesis requires haem ligation to reduced apocytochrome cysteines, catalysed by the cytochrome c synthase, CcsBA. While ccsBA could not be deleted, we showed that the thiol reductase DsbD and the CcsX homologue Cj1207 are involved in, but not essential for, cytochromes c biogenesis.

      • Bacterial pathogens
      • Campylobacter