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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 2150

  1. The dual-specificity kinase DYRK1A interacts with the Hepatitis B virus genome and regulates the production of viral RNA

    • PLOS ONE
    • by Florentin Pastor, Emilie Charles, Chiara Di Vona, Maëlys Chapelle, Michel Rivoire, Guillaume Passot, Benoit Chabot, Susana de la Luna, Julie Lucifora, David Durantel, Anna Salvetti

      • Viruses
      • Hepatitis
  2. Illicit Fentanyl Use and Hepatitis C Virus Seroconversion Among People Who Inject Drugs in Tijuana and San Diego: Results From a Binational Cohort Study

    • Clinical Infectious Diseases
    • Background Illicitly manufactured fentanyl (IMF) increases overdose mortality, but its role in infectious disease transmission is unknown. We examined whether IMF use predicts hepatitis C virus (HCV) and human immunodeficiency virus (HIV) incidence among a cohort of people who inject drugs (PWID) in San Diego, California and Tijuana, Mexico.

      • Viruses
      • Hepatitis
  3. Comparative Pathogenicity of Duck Hepatitis A Virus Genotype 3 in Different Duck Breeds: Implications of the Diagnosis and Prevention of Duck Viral Hepatitis

    • Comparative Immunology, Microbiology and Infectious Diseases
      • Viruses
      • Hepatitis
  4. Role of Circulating microRNAs in Liver Disease and HCC: Focus on miR-122

    • Genes
    • miR-122 is the most abundant microRNA (miRNA) in the liver; it regulates several genes mainly involved in cell metabolism and inflammation. Host factors, diet, metabolic disorders and viral infection promote the development of liver diseases, including hepatocellular carcinoma (HCC). The downregulation of miR-122 in tissue is a common feature of the progression of liver injury.

      • Viruses
      • Hepatitis
  5. CD4+ T cell help during early acute hepacivirus infection is critical for viral clearance and the generation of a liver-homing CD103+CD49a+ effector CD8+ T cell subset

    • PLOS Pathogens
    • by Jarrett Lopez-Scarim, Dustyn Mendoza, Shashank M. Nambiar, Eva Billerbeck

      • Viruses
      • Hepatitis
  6. Ultraviolet (UV-C) Light Systems for the Inactivation of Feline Calicivirus and Tulane Virus in Model Fluid Foods

    • Food and Environmental Virology
    • Conventional UV-C (254 nm) inactivation technologies have limitations and potential operator-safety risk. To overcome these disadvantages, novel UV-C light-emitting diodes (LED) are developed and investigated for their performance. This study aimed to determine the inactivation of human norovirus (HuNoV) surrogates, Tulane virus (TV), and feline calicivirus (FCV-F9), by UV-C (254 nm) in comparison to UV-C LED (279 nm) in phosphate-buffered saline (PBS) and coconut water (CW).

      • Viruses
      • Norovirus
  7. Changes in intestinal permeability and gut microbiota following diet-induced weight loss in patients with metabolic dysfunction-associated steatohepatitis and liver fibrosis

    • Gut Microbes
      • Viruses
      • Hepatitis
  8. Longitudinal survey of hepatitis E virus in extensively raised pigs in Spain

    • Veterinary Microbiology
      • Viruses
      • Hepatitis
  9. Enrichment Reveals Extensive Integration of Hepatitis B Virus DNA in Hepatitis Delta Virus-Infected Patients

    • The Journal of Infectious Diseases
    • Background Hepatitis B virus (HBV) DNA may become integrated into the human genome of infected human hepatocytes. Expression of integrations can produce the surface antigen (HBsAg) that is required for synthesis of hepatitis D virus (HDV) particles and the abundant subviral particles in the blood of HBV- and HDV-infected subjects. Knowledge about the extent and variation of HBV integrations and impact on chronic HDV is still limited.

      • Viruses
      • Hepatitis
  10. Growing Awareness: Limited Testing and Screening Bias for Hepatitis Delta Virus in Utah 2000–2021

    • The Journal of Infectious Diseases
    • Background This study assessed the epidemiology of hepatitis delta virus (HDV) within the University of Utah UHealth health care system (2000–2021). Methods Analysis of HDV/HBV testing, diagnostic codes, liver enzymes, and comorbidities was performed. Results Among the 1962 HBV patients, only 22.2% underwent HDV testing, revealing an 8.3% positivity rate for HDV coinfections.

      • Viruses
      • Hepatitis
  11. Hepatitis B Surface Antigen Loss: What Does Integration Have to Do With a Functional Hepatitis B Virus Cure?

    • The Journal of Infectious Diseases
    • Worldwide, approximately, 400 million people have chronic hepatitis B virus (HBV) infection (chronic hepatitis B [CHB]), a leading cause of liver-related death [1]. A highly effective vaccine has prevented millions of infections but belies the challenge to treat and cure those with CHB.

      • Viruses
      • Hepatitis
  12. Tumour stemness and poor clinical outcomes in haemochromatosis patients with hepatocellular carcinoma

    • Journal of Clinical Pathology
    • Aims

      Patients with haemochromatosis (HFE) are known to have an increased risk of developing hepatocellular carcinoma (HCC). Available data are conflicting on whether such patients have poorer prognosis, and there is lack of data regarding the biology of HFE-HCC. We compared the course of HFE-HCC with a matched non-HFE-HCC control group and examined tumour characteristics using immunohistochemistry.

      Methods

      • Viruses
      • Hepatitis
  13. Droplet digital PCR for precise quantification of human norovirus in shellfish associated with gastroenteritis illness

    • Journal of Food Protection
      • Viruses
      • Norovirus
  14. Precise location of three novel linear epitopes using the generated monoclonal antibodies against the Knob domain of FAdV-4 surface structural protein, fiber1

    • Frontiers in Cellular and Infection Microbiology
    • BackgroundFowl adenovirus serotype 4 (FAdV-4) is the main pathogen of hepatitis-hydropericardium syndrome (HHS), which brings huge economic losses to the poultry industry worldwide. Fiber-1 protein plays an important role in viral infection and pathogenesis by binding directly to cellular receptors of FAdV-4.

      • Viruses
      • Hepatitis
  15. PSIV-23 Transcriptomic analysis revealed the mechanisms of resilience and susceptibility to nonalcoholic steatohepatitis in dairy goats under high-concentrate diet

    • Journal of Animal Science
    • Liver health is vital for growth and health of ruminants, which can directly affect their performance. High-concentrate diet (HCD) feeding, a common practice to meet the energy requirements for animal production and growth, has been known to induce liver damage, including nonalcoholic fatty liver (NAFL) and nonalcoholic steatohepatitis (NASH) in ruminants. To date, the regulatory mechanisms of liver metabolic dysfunctions in ruminants induced by HCD are not well defined.

      • Viruses
      • Hepatitis
  16. Mechanism of emodin in treating hepatitis B virus-associated hepatocellular carcinoma: network pharmacology and cell experiments

    • Frontiers in Cellular and Infection Microbiology
    • IntroductionHepatocellular carcinoma (HCC) is a pressing global issue, with Hepatitis B virus (HBV) infection remaining the primary. Emodin, an anthraquinone compound extracted from the natural plant’s.

      • Viruses
      • Hepatitis
  17. Machine Learning and Imputation to Characterize Human Norovirus Genotype Susceptibility to Sodium Hypochlorite

    • Food and Environmental Virology
    • Human norovirus (HuNoV) is the leading cause of foodborne illness in the developed world and a major contributor to gastroenteritis globally. Its low infectious dose and environmental persistence necessitate effective disinfection protocols. Sodium hypochlorite (NaOCl) bleach is a widely used disinfectant for controlling HuNoV transmission via contaminated fomites.

      • Viruses
      • Norovirus
  18. The Role of RNA Splicing in Liver Function and Disease: A Focus on Metabolic Dysfunction-Associated Steatotic Liver Disease

    • Genes
    • RNA splicing is an essential post-transcriptional mechanism that facilitates the excision of introns and the connection of exons to produce mature mRNA, which is essential for gene expression and proteomic diversity. In the liver, precise splicing regulation is critical for maintaining metabolic balance, detoxification, and protein synthesis.

      • Viruses
      • Hepatitis
  19. The triglyceride-synthesizing enzyme diacylglycerol acyltransferase 2 modulates the formation of the hepatitis C virus replication organelle

    • PLOS Pathogens
    • by Isabelle Reichert, Ji-Young Lee, Laura Weber, Marceline M. Fuh, Lina Schlaeger, Stefanie Rößler, Volker Kinast, Sarah Schlienkamp, Janina Conradi, Florian W. R. Vondran, Stephanie Pfaender, Pietro Scaturro, Eike Steinmann, Ralf Bartenschlager, Thomas Pietschmann, Joerg Heeren, Chris Lauber, Gabrielle Vieyres

      • Viruses
      • Hepatitis
  20. Serological and Molecular Survey of Hepatitis E Virus in Small Ruminants from Central Portugal

    • Food and Environmental Virology
    • Hepatitis E virus (HEV) is currently recognized as an emerging problem and a growing concern for public health in developed countries, with HEV infections mainly attributable to foodborne transmission of HEV-3. The zoonotic HEV genotype 3 infects a wide range of mammalian hosts, with swine considered as the primary host. This study investigates the occurrence of HEV among small ruminants in Portugal.

      • Viruses
      • Hepatitis
  21. Development of a cellulose nanofiber composite film containing CuO/ZnO nanoparticles and its human norovirus inactivation properties in clams

    • Food Packaging and Shelf Life
      • Viruses
      • Norovirus
  22. Cardiovascular risk in US adults with nonalcoholic steatohepatitis (NASH) vs. matched non-NASH controls, National Health and Nutrition Examination Survey, 2017–2020

    • PLOS ONE
    • by Jonathan J. Woolley, Jesse Fishman, Christina M. Parrinello, Tom O’Connell

      Background

      NASH is considered a contributor to atherosclerotic cardiovascular disease (ASCVD) risk; however, its contribution beyond traditional risk factors for CVD, particularly diabetes, is less clearly understood. This study aimed to quantify the cardiovascular-event risk associated with NASH, independent of diabetes status.

      Methods

      • Viruses
      • Hepatitis
  23. Utilizing Zebrafish Embryos for Replication of Tulane Virus: A Human Norovirus Surrogate

    • Food and Environmental Virology
    • The zebrafish larvae/embryo model has been shown to support the replication of seven strains (G1.7[P7], GII.2[P16], GII.3[P16], GII.4[P4], GII.4[P16], GII.6[P7], and GII.17[P13]) of human norovirus (HuNoV). However, due to challenges in consistently obtaining HuNoV-positive stool samples from clinical sources, evaluating HuNoV surrogates in this model is highly valuable. This study assesses the potential of zebrafish embryos and larvae as a model for Tulane virus (TuV) replication.

      • Viruses
      • Norovirus
  24. Evaluation of autoimmune liver disease antibodies in hepatitis patients

    • PLOS ONE
    • by Namsoo Kim, Sinyoung Kim, Jong Rak Choi, Younhee Park

      Background/aims

      Autoimmune hepatitis (AIH) is characterized by the presence of auto-antibodies and high blood immunoglobulin G (IgG) levels. In this study, the line immunoassay (LIA) was designed to assess various autoantibodies.

      Methods

      • Viruses
      • Hepatitis
  25. The Hepatoprotective Possessions of Specific Iranian Medicinal Plants

    • Journal of Food Biochemistry
    • With its historical roots, Iranian traditional medicine has played a significant role in addressing liver‐related disorders and providing alternative approaches to synthetic drugs. Liver‐related disorders, such as hepatitis, liver cirrhosis, and nonalcoholic fatty liver disease, pose significant health challenges worldwide. From traditional practices and indigenous knowledge, Iranian traditional medicine offers a holistic approach to liver health.

      • Viruses
      • Hepatitis