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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 51 - 75 of 2107

  1. The European Union One Health 2022 Zoonoses Report

    • EFSA Journal
    • Abstract This report by the European Food Safety Authority and the European Centre for Disease Prevention and Control presents the results of the zoonoses monitoring and surveillance activities carried out in 2022 in 27 Member States (MSs), the United Kingdom (Northern Ireland) and 11 non‐MSs. Key statistics on zoonoses and zoonotic agents in humans, food, animals and feed are provided and interpreted historically.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  2. Functional features of a novel interferon-stimulated gene SHFL: a comprehensive review

    • Frontiers in Microbiology
    • Various interferon (IFN)-stimulated genes (ISGs), expressed via Janus kinase–signal transducer and activator of transcription (JAK-STAT) signaling pathway-stimulated IFNs to increase antiviral effects or regulate immune response, perform different roles in virus-infected cells. In recent years, a novel ISG, SHFL, which is located in the genomic region 19p13.2 and comprises two isoforms, has been studied as a virus-inhibiting agent.

      • Viruses
      • Hepatitis
  3. Development of recombinant oyster heat shock protein 70 mediated in situ capture RT-qPCR to detect human norovirus and Tulane virus

    • Food Control
    • Human noroviruses (HuNoVs) are the major foodborne pathogen that causes non-bacterial gastroenteritis globally. Conventional RT-qPCR is prone to counting free RNA in the sample, resulting in an inflated infectious virus titer. Porcine gastric mucin (PGM), broadly used as the capture unit of in situ capture RT-qPCR (ISC-RT-qPCR), can precisely capture intact norovirus without adsorbing free RNA.

      • Viruses
      • Norovirus
  4. Duck hepatitis A virus type 1 infection induces hepatic metabolite and gut microbiota changes in ducklings

    • Poultry Science
    • Duck hepatitis A virus type 1 (DHAV-1) can cause severe liver damage in infected ducklings and is a fatal and contagious pathogen that endangers the Chinese duck industry. The objective of this study was to explore the correlation mechanism of liver metabolism-gut microbiota in DHAV-1 infection.

      • Viruses
      • Hepatitis
  5. Association between gut microbiota and NAFLD/NASH: a bidirectional two-sample Mendelian randomization study

    • Frontiers in Cellular and Infection Microbiology
    • Background

      Recent studies have suggested a relationship between gut microbiota and non-alcoholic fatty liver disease (NAFLD)/nonalcoholic steatohepatitis (NASH). However, the nature and direction of this potential causal relationship are still unclear. This study used two-sample Mendelian randomization (MR) to clarify the potential causal links.

      Methods

      • Viruses
      • Hepatitis
  6. Carvedilol impairs bile acid homeostasis in mice: implication for nonalcoholic steatohepatitis

    • Toxicological Sciences
    • Carvedilol is a widely used beta-adrenoreceptor antagonist for multiple cardiovascular indications; however, it may induce cholestasis in patients, but the mechanism for this effect is unclear. Carvedilol also prevents the development of various forms of experimental liver injury, but its effect on nonalcoholic steatohepatitis (NASH) is largely unknown.

      • Viruses
      • Hepatitis
  7. Blockchain Technology for Enhancing Sustainable Food Systems: A Consumer Perspective

    • International Journal of Food Science & Technology
    • Summary This paper explores the potential of blockchain technology (BCT) in promoting sustainable food production and consumption (SFPC) from a consumer perspective. India, a significant global food producer, faces challenges related to affordability and food logistics due to transport and labour constraints. Food safety concerns, i.e., foodborne illnesses and quality issues, alongside unexpected events like COVID‐19 and geopolitical conflicts, threaten SFPC.

      • Viruses
      • COVID-19
  8. Detection of hepatitis E RNA in pork products at point of retail in Ireland – Are consumers at risk?

    • International Journal of Food Microbiology
    • Hepatitis E (HEV), a zoonotic virus, is the leading cause of acute viral hepatitis in Europe. The presence of HEV in domestic pigs can result in infections in humans through consumption of pork products which are undercooked or where processing methods are insufficient to inactivate the virus.

      • Viruses
      • Hepatitis
  9. Increased fecal ethanol and enriched ethanol-producing gut bacteria Limosilactobacillus fermentum, Enterocloster bolteae, Mediterraneibacter gnavus and Streptococcus mutans in nonalcoholic steatohepatitis

    • Frontiers in Cellular and Infection Microbiology
    • Background Non-alcoholic steatohepatitis (NASH) has become a major public health issue as one of the leading causes of liver disease and transplantation worldwide. The instrumental role of the gut microbiota is emerging but still under investigation. Endogenous ethanol (EtOH) production by gut bacteria and yeasts is an emerging putative mechanism.

      • Viruses
      • Hepatitis
  10. Assessment of the Adverse Health Effects of Aflatoxin Exposure from Unpackaged Peanut Oil in Guangdong, China

    • Toxins
    • Aflatoxins are liver carcinogens and are common contaminants in unpackaged peanut (UPP) oil. However, the health risks associated with consuming aflatoxins in UPP oil remain unclear. In this study, aflatoxin contamination in 143 UPP oil samples from Guangdong Province were assessed via liquid chromatography–tandem mass spectrometry (LC-MS). We also recruited 168 human subjects, who consumed this oil, to measure their liver functions and lipid metabolism status.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
      • Viruses
      • Hepatitis
  11. Convergent application of traditional Chinese medicine and gut microbiota in ameliorate of cirrhosis: a data mining and Mendelian randomization study

    • Frontiers in Cellular and Infection Microbiology
    • Objective Traditional Chinese medicine (TCM) has been used for the treatment of chronic liver diseases for a long time, with proven safety and efficacy in clinical settings. Previous studies suggest that the therapeutic mechanism of TCM for hepatitis B cirrhosis may involve the gut microbiota. Nevertheless, the causal relationship between the gut microbiota, which is closely linked to TCM, and cirrhosis remains unknown.

      • Viruses
      • Hepatitis
  12. Metabarcoding of Hepatitis E Virus Genotype 3 and Norovirus GII from Wastewater Samples in England Using Nanopore Sequencing

    • Food and Environmental Virology
    • Norovirus is one of the largest causes of gastroenteritis worldwide, and Hepatitis E virus (HEV) is an emerging pathogen that has become the most dominant cause of acute viral hepatitis in recent years. The presence of norovirus and HEV has been reported within wastewater in many countries previously. Here we used amplicon deep sequencing (metabarcoding) to identify norovirus and HEV strains in wastewater samples from England collected in 2019 and 2020.

      • Viruses
      • Hepatitis
      • Norovirus
  13. Rice‐produced classical swine fever virus glycoprotein E2 with herringbone‐dimer design to enhance immune responses

    • Plant Biotechnology Journal
    • Summary Pestiviruses, including classical swine fever virus, remain a concern for global animal health and are responsible for major economic losses of livestock worldwide. Despite high levels of vaccination, currently available commercial vaccines are limited by safety concerns, moderate efficacy, and required high doses. The development of new vaccines is therefore essential. Vaccine efforts should focus on optimizing antigen presentation to enhance immune responses.

      • Viruses
      • Pestivirus
  14. Monitoring and Genotyping of Norovirus in Bivalve Molluscan Shellfish from Northern Italian Seas (2018–2020)

    • Foodborne Pathogens and Disease
    • Norovirus (NoV) is an enteric virus with foodborne transmission. Bivalve shellfish are a main source of infections and outbreaks. In Italy a voluntary based monitoring plan to check the safety of bivalve shellfish was set up at provincial level. This study describes the occurrence and distribution of NoV in the Northern Adriatic Sea and in the Ligurian Sea.

      • Viruses
      • Norovirus
  15. Construction and immune evaluation of the recombinant duck adenovirus type 3 delivering capsid protein VP1 of the type 1 duck hepatitis virus

    • Poultry Science
    • Adenovirus serves as an excellent viral vector and is employed in vector vaccine research. Duck hepatitis A virus type 1 (DHAV1) and duck adenovirus type 3 (DAdV3) cause significant economic losses in the Chinese duck industry.

      • Viruses
      • Hepatitis
  16. Navigating the UKAS Accreditation Process for Detecting Norovirus and Hepatitis A Virus in Fresh and Frozen Produce: a Case Study

    • Food Analytical Methods
    • Given the urgent requirement for more laboratories to develop proficiency in detecting foodborne viruses, this case study charts the path to accreditation, demystifying the process of validating a method for detecting norovirus and hepatitis A virus in fresh produce. Securing accreditation is crucial to ensuring dependable and precise food analysis, particularly relevant for products frequently consumed raw, which are at risk of contamination by foodborne viruses.

      • Viruses
      • Hepatitis
      • Norovirus
  17. Hepatitis E virus neutralization by porcine serum antibodies

    • Journal of Clinical Microbiology
    • Journal of Clinical Microbiology, Ahead of Print. The consumption of raw or undercooked meat products poses a serious risk for human hepatitis E virus (HEV) infections. In many high-income countries, domestic pigs and wild boars represent the main animal reservoirs for HEV and are usually identified by reverse transcription-PCR and antibody enzyme-linked immunosorbent assay (ELISA).

      • Viruses
      • Hepatitis
  18. Prevalence of hepatitis E virus genotype 4 of probable human origin in Tibetan pigs from the Qinghai‐Tibetan Plateau, China

    • Zoonoses and Public Health
    • Abstract Hepatitis E virus (HEV) is the most common cause of acute viral hepatitis worldwide. In 2018–2022, we investigated the presence of HEV RNA in 1233 stool samples collected in the Qinghai‐Tibetan Plateau, including humans (16), Tibetan pigs (624), yaks (312), sheep (267), and dogs (14). HEV RNA was only detected in Tibetan pig faecal samples (18.27%, 114/624).

      • Viruses
      • Hepatitis
  19. A novel formula used for predicting hepatocellular carcinoma after the achievement of sustained virologic response by direct-acting antivirals in patients with chronic hepatitis C

    • PLOS ONE
    • by Yuji Yoshida, Masanori Atsukawa, Chisa Kondo, Michika Kitamura, Kaori Shioda-Koyano, Tadamichi Kawano, Hiroki Ono, Korenobu Hayama, Tomomi Okubo, Taeang Arai, Norio Itokawa, Katsuhiko Iwakiri Although eliminating HCV can prevent hepatocellular carcinoma (HCC), some patients develop HCC even after obtaining sustained virologic response (SVR). Previously, we developed a new formula to predict advanced liver fibrosis.

      • Viruses
      • Hepatitis
  20. Sequential infection of human norovirus and Salmonella enterica resulted in higher mortality and ACOD1/IRG1 upregulation in zebrafish larvae

    • Microbes and Infection
    • Human norovirus (HNoVs) and Salmonella are both very important foodborne pathogens with mixed infection of HNoV and Salmonella reported clinically.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • Norovirus
  21. Detection of Hepatitis E Virus in Rabbits and Rabbit Meat from Slaughterhouses in Hebei Province of China

    • Vector-Borne and Zoonotic Diseases
    • Background: Hepatitis E virus (HEV) is a zoonotic pathogen. HEV has been found to be widely prevalent in rabbits. Its isolates are classified into HEV-3, rabbit subgenotype (HEV-3ra). The routes of human infection with HEV-3ra remain unclear; however, foodborne transmission is possible when asymptomatically infected animals enter the food chain. The prevalence of HEV infection in slaughtered rabbits and the presence of HEV in rabbit meat were evaluated in this study.

      • Viruses
      • Hepatitis
  22. Inactivation of Tulane virus and feline calicivirus by aqueous ozone

    • Journal of Food Science
    • Abstract Ongoing challenges with reproducible human norovirus cultivable assays necessitate the use of surrogates, such as feline calicivirus (FCV‐F9) and Tulane virus (TV), during inactivation studies. Chlorine alternates used as control strategies include aqueous and gaseous ozone. This study aimed at determining the inactivation of FCV‐F9 and TV by a portable ozone‐generating device.

      • Viruses
      • Norovirus
  23. First Seroepidemiological Investigation of Hepatitis E Virus Infection in Backyard Pigs from Northeastern India: Prevalence and Associated Risk Factors

    • Food and Environmental Virology
    • Hepatitis E virus (HEV) is the leading cause of acute viral hepatitis globally, with zoonotic potential, and pigs are considered the major reservoir. To determine the seroprevalence of HEV infection in pigs reared in backyard conditions in the northeastern region of India, blood samples were collected from 400 pigs from five northeastern states (80 samples from each state) and tested for IgG antibodies against HEV using an ELISA assay.

      • Viruses
      • Hepatitis
  24. Assessing food safety risks based on a geospatial analysis: toward a cross‐regional food safety management

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Food safety risks (FSRs) are increasingly characterized by geographical complexity along with rapid urbanization, changing dietary pattern, and the modernization of the food industry. These factors pose challenges for food risk control in developing economies, more so during the global COVID‐19 pandemic. The accurate assessment of risk source and transfer path is a crucial step toward enhancing cross‐regional food safety management.

      • Viruses
      • COVID-19
  25. Co-circulation of Hepatitis E Virus (HEV) Genotype 3 and Moose-HEV-Like Strains in Free-Ranging-Spotted Deer (Axis axis) in Uruguay

    • Food and Environmental Virology
    • Hepatitis E caused by hepatitis E virus (HEV) is considered an emerging foodborne zoonosis in industrialized, non-endemic countries. Domestic pigs and wild boars are considered the main reservoir of HEV. However, HEV can also infect an ever-expanding host range of animals, but they exact role in transmitting the virus to other species or humans is mostly unknown.

      • Viruses
      • Hepatitis