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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 176 - 200 of 2094

  1. Temperature, Time, and Type, Oh My! Key Environmental Factors Impacting the Recovery of Salmonella Typhimurium, Listeria monocytogenes, and Tulane Virus from Surfaces

    • Environmental monitoring (EM) programs are designed to detect the presence of pathogens in food manufacturing environments with the goal of preventing microbial contamination of food. Nevertheless, limited knowledge exists regarding the influence of environmental conditions on microbial recovery during EM. This study utilizes a commercially-available polyurethane foam (PUF) EM tool to determine the influence of environmental factors on the recovery of foodborne pathogens.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  2. Novel subtypes and unexpected heterogeneity of hepatitis E viral strains in wild boar captured in a small area in Central Italy

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Wild boar is the main sylvatic reservoir of the genotype 3 of hepatitis E virus (HEV). The occurrence of HEV-3 human cases has been linked to the consumption of raw or undercooked pig and wild boar meat and liver. The zoonotic transmission of HEV-3 has been confirmed by sequencing identical or strictly related viral strains in humans, wild boar, and derived food.

      • Viruses
      • Hepatitis
  3. Persistent cryoglobulinemia after antiviral treatment is associated with advanced fibrosis in chronic hepatitis C patients

    • PLOS ONE
    • by Batbold Batsaikhan, Ching-I. Huang, Ming-Lun Yeh, Chung-Feng Huang, Yi-Hung Lin, Po-Cheng Liang, Ming-Yen Hsieh, Yi-Ching Lin, Jee-Fu Huang, Wan-Long Chuang, Jin-Ching Lee, Ming-Lung Yu, Hsing-Tao Kuo, Chia-Yen Dai Background High dosage and longer duration of antiviral treatment has been suggested to treat cryoglobulinemia patients.

      • Viruses
      • Hepatitis
  4. The use of technology-based adherence monitoring in the treatment of hepatitis C virus

    • Therapeutic Advances in Infectious Disease
    • Direct-acting antivirals (DAAs) achieve high hepatitis C virus (HCV) cure rates and are forgiving to missed doses, but adherence–efficacy relationships have not been well defined. Traditional adherence measures (e.g. pill counts, self-report and pharmacy refills) over-estimate medication adherence. Newer technology-based tools have been used to provide more objective adherence data.

      • Viruses
      • Hepatitis
  5. The First Evidence of Zoonotic Hepatitis E Virus (HEV) Exposure in Domestic Cats in Türkiye

    • Comparative Immunology, Microbiology and Infectious Diseases
    • Hepatitis E virus (HEV) infection as a zoonotic disease virus has been thoroughly investigated in pigs around the world, but there have been few studies in pet animals. Although molecula and serological evidence suggests that numerous other animal species may act as HEV hosts in industrialized countries, domestic pigs and wild boars are the main reservoirs of HEV genotypes 3 and 4 for human infections.

      • Viruses
      • Hepatitis
  6. Case numbers of acute hepatitis of unknown aetiology among children in 24 countries up to 18 April 2022 compared to the previous 5 years

    • Eurosurveillance
    • An increase of acute hepatitis of unknown aetiology has been reported among children in multiple countries worldwide. With a rapid online survey among hospitals in and outside of Europe, we describe case numbers recorded from 1 January to 18 April 2022 vs the previous 5 years.

      • Viruses
      • Hepatitis
  7. Hepatitis C prevalence and key population size estimate updates in San Francisco: 2015 to 2019

    • PLOS ONE
    • by Shelley N. Facente, Rachel Grinstein, Roberta Bruhn, Zhanna Kaidarova, Erin Wilson, Jennifer Hecht, Katie Burk, Eduard Grebe, Meghan D. Morris Background In 2017, San Francisco’s initiative to locally eliminate hepatitis C virus (HCV) as a public health threat, End Hep C SF, generated an estimate of city-wide HCV prevalence in 2015, but only incorporated limited information about population HCV treatment.

      • Viruses
      • Hepatitis
  8. Genomic characteristics and recombination patterns of swine hepatitis E virus in China

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Zoonotic hepatitis E, mainly caused by swine hepatitis E virus (sHEV), is endemic in China, causing great economic disruption and public health threats. Although recombination is critical for the evolution of viruses, there is a limited assessment of its occurrence among sHEVs.

      • Viruses
      • Hepatitis
  9. Fecal Microbiota Transplantation Alters the Outcome of Hepatitis B Virus Infection in Mice

    • Frontiers in Cellular and Infection Microbiology
    • The susceptibility of mice to hepatitis B virus (HBV) infection depends on their genetic background. The gut microbiota modulates the antiviral immune response in the liver and plays a protective role against HBV infection. However, whether HBV infection outcomes depend on the gut microbiota remains unclear. In this study, we assessed the gut microbiota composition in naïve BALB/c and C57BL/6 mice using 16S rRNA gene sequencing.

      • Viruses
      • Hepatitis
  10. Recent Advances of Nanotechnology in Mitigating Emerging Pollutants in Water and Wastewater: Status, Challenges, and Opportunities

    • Water, Air, & Soil Pollution
    • Availability of clean and safe freshwater has become a looming global concern. The accelerated demography, industrialization, and climate changes contaminate the meager freshwater reserves. Pollution of water bodies is significantly detrimental to health, ecology, economy, and society.

      • Viruses
      • Hepatitis
  11. Evaluation of Toxicant-Associated Fatty Liver Disease and Liver Neoplastic Progress in Sprague-Dawley Rats Treated with Low Doses of Aflatoxin B1 Alone or in Combination with Extremely Low Frequency Electromagnetic Fields

    • Toxins
    • The term toxicant-associated fatty liver disease (TAFLD) has been proposed to describe fatty liver diseases connected to toxicants other than alcohol. Aflatoxins are mycotoxins commonly found as contaminants in foods and feeds, which are known liver toxicants and potential candidates as potential causes of TAFLD.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
      • Viruses
      • Hepatitis
  12. Analytical and clinical validation of an amplicon-based next generation sequencing assay for ultrasensitive detection of circulating tumor DNA

    • PLOS ONE
    • by Jonathan Poh, Kao Chin Ngeow, Michelle Pek, Kian-Hin Tan, Jing Shan Lim, Hao Chen, Choon Kiat Ong, Jing Quan Lim, Soon Thye Lim, Chwee Ming Lim, Boon Cher Goh, Yukti Choudhury Next-generation sequencing of circulating tumor DNA presents a promising approach to cancer diagnostics, complementing conventional tissue-based diagnostic testing by enabling minimally invasive serial testing and broad genomic coverage through a simple blood draw to maximize therapeutic benefit to patients.

      • Viruses
      • Hepatitis
  13. Livogrit Prevents Methionine-Cystine Deficiency Induced Nonalcoholic Steatohepatitis by Modulation of Steatosis and Oxidative Stress in Human Hepatocyte-Derived Spheroid and in Primary Rat Hepatocytes

    • Bioengineered
    • The prevalence of nonalcoholic steatohepatitis (NASH), characterized by fatty liver, oxidative injury, and inflammation, has considerably increased in the recent years. Due to the complexity of NASH pathogenesis, compounds which can target different mechanisms and stages of NASH development are required. A robust screening model with translational capability is also required to develop therapies targeting NASH.

      • Viruses
      • Hepatitis
  14. Genetic diversity of hepatitis E virus (HEV) in imported and domestic camels in Saudi Arabia

    • Scientific Reports
    • Camels gained attention since the discovery of MERS-CoV as intermediary hosts for potentially epidemic zoonotic viruses. DcHEV is a novel zoonotic pathogen associated with camel contact. This study aimed to genetically characterize DcHEV in domestic and imported camels in Saudi Arabia. DcHEV was detected by RT-PCR in serum samples, PCR-positive samples were subjected to sequencing and phylogenetic analyses. DcHEV was detected in 1.77% of samples with higher positivity in domestic DCs.

      • Viruses
      • Hepatitis
  15. A New Vaccination Method Based on Phage NgoΦ6 and Its Phagemid Derivatives

    • Frontiers in Microbiology
    • Phagemid particles based on the Neisseria gonorrhoeae filamentous phage NgoΦ6 were used as a vaccine delivery system. We demonstrate that the host proteins incorporated into/associated with these particles can be encoded by chromosomal genes of the host bacterium or from plasmids able to replicate as an autonomous entity in the phagemid host. Phagemid particles were prepared from three types of cells, namely, Salmonella enterica ser.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • Hepatitis
  16. Immune Checkpoint Molecules Expressed on CD4+ T Cell Subsets in Chronic Asymptomatic Hepatitis B Virus Carriers With Hepatitis B e Antigen-Negative

    • Frontiers in Microbiology
    • Background

      Chronic hepatitis B virus (HBV) infection remains a major public health problem worldwide. Immune checkpoint molecules expressed on CD4+ T cells play critical roles in chronic HBV infection. However, their roles in chronic asymptomatic HBV carriers (ASCs) with hepatitis B e antigen (HBeAg)-negative remain unclear. In this study, we explored the role of immune checkpoint molecules expressed on CD4+ T cell subsets in chronic ASCs with HBeAg-negative.

      Methods

      • Viruses
      • Hepatitis
  17. Detection of exosomal miR-18a and miR-222 levels in Egyptian patients with hepatic cirrhosis and hepatocellular carcinoma

    • International Journal of Immunopathology and Pharmacology
    • Background Hepatocellular carcinoma (HCC) is known to be the second leading cause of cancer-related mortality worldwide. For improving the prognosis as well as reducing the rate of mortality, early diagnosis of HCC is a must. Aims This study was conducted to assess the ability of the serum expression of exosomal miR-18a and miR-222 to differentiate and diagnose patients with HCC, patients with liver cirrhosis, and healthy controls.

      • Viruses
      • Hepatitis
  18. Evaluation of Virucidal Efficacy of Human Norovirus Using Combined Sprayed Slightly Acidic Electrolyzed Water and Ultraviolet C-Light-Emitting Diode Irradiation Treatment Based on Optimized Capture Assay for Quantitative RT-qPCR

    • Frontiers in Microbiology
    • Slightly acidic electrolyzed water (SAEW), an effective non-thermal virucidal treatment, is used widely to prevent infectious viral cross-contamination. Surface disinfection technologies using ultraviolet C-light-emitting diode (UVC-LED) irradiation have recently attracted considerable attention. The SAEW sprayer technique is an efficient approach to preventing the spread of infectious viral pathogens in the public healthcare sector.

      • Viruses
      • Norovirus
  19. Long Noncoding RNA Expression Rofiles Elucidate the Potential Roles of lncRNA- XR_003496198 in Duck Hepatitis A Virus Type 1 Infection

    • Frontiers in Cellular and Infection Microbiology
    • Duck hepatitis A virus type 1 (DHAV-1) is a highly lethal virus that severely affects the duck industry worldwide. Long noncoding RNAs (lncRNAs) exert crucial roles in pathogen attacks. Here, we conducted deep transcriptome analysis to investigate the dynamic changes of host lncRNAs profiles in DHAV-1-infected duck embryo fibroblasts. We identified 16,589 lncRNAs in total and characterized their genomic features.

      • Viruses
      • Hepatitis
  20. Effects of sodium hypochlorite on the potential infectivity of human norovirus GII.4 using propidium monoazide with RT‐qPCR and quality assessments in Manila clams (Ruditapes philippinarum)

    • Journal of Food Processing and Preservation
    • Journal of Food Processing and Preservation, Accepted Article. This study investigated the effect of NaOCl on the inactivation of human norovirus (HNoV) GII.4 infectivity in Manila clams treated with NaOCl solution at 100-1,000 mg/L chlorine for 10 min using propidium monoazide (PMA)/RT-qPCR.

      • Viruses
      • Norovirus
  21. Using codon usage analysis to speculate potential animal hosts of hepatitis E virus: An exploratory study

    • Infection, Genetics and Evolution
    • There has been an increase in the reported number of animals worldwide that carry the hepatitis E virus (HEV). This study aimed to explore potential animal hosts for HEV through codon usage analysis.

      • Viruses
      • Hepatitis
  22. Antiviral and Virucidal Activities of Camptothecin on Fowl Adenovirus Serotype 4 by Blocking Virus Replication

    • Frontiers in Cellular and Infection Microbiology
    • Fowl adenovirus serotype 4 (FAdV-4) caused hepatitis–hydropericardium syndrome in poultry and caused huge economic losses to the poultry industry. At present, antiviral drugs have not been reported to be effective against this virus, and new treatment methods are urgently needed to treat FAdV-4. Camptothecin has been shown to have antiviral activity against various viruses; however, whether it can inhibit FAdV-4 infection remains unclear.

      • Viruses
      • Hepatitis
  23. Viral Hepatitis E Outbreaks in Refugees and Internally Displaced Populations, sub-Saharan Africa, 2010–2020

    • Emerging Infectious Diseases
    • Hepatitis E virus is a common cause of acute viral hepatitis. We analyzed reports of hepatitis E outbreaks among forcibly displaced populations in sub-Saharan Africa during 2010–2020. Twelve independent outbreaks occurred, and >30,000 cases were reported. Transmission was attributed to poor sanitation and overcrowding.

      • Viruses
      • Hepatitis
  24. Patients with treated autoimmune hepatitis and persistent suppression of plasmacytoid dendritic cells: A different point of view

    • International Journal of Immunopathology and Pharmacology
    • Objectives: Plasmacytoid dendritic cells (pDCs) have been shown to have a role in autoimmune diseases, but their role in Autoimmune Hepatitis (AIH) is not completely clear. In the present study, we assessed the frequency of pDCs in peripheral blood of AIH patients under long-term standard immunosuppressive therapy. Methods: This cross-sectional analysis enrolled 27 AIH patients and 27 healthy controls.

      • Viruses
      • Hepatitis
  25. Evaluation of a New Norovirus Genogroups GI and GII In Vitro Molecular Diagnostic Assay Using Clinical Specimens Collected from Acute Diarrheal Outbreaks

    • Foodborne Pathogens and Disease
    • Norovirus is a leading cause of acute gastroenteritis (AGE) in Taiwan. To improve diagnosis as part of laboratory surveillance, AGE surveillance was conducted using a new fluorescent probe hydrolysis-based insulated isothermal polymerase chain reaction (PCR) method, the POCKIT system, and the results were compared with those obtained from conventional methods. A total of 119 clinical stool samples from reported AGE outbreaks were collected for this study.

      • Viruses
      • Norovirus