An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 401 - 412 of 412

  1. Genetic Diversity and Pathogenic Potential of Attaching and Effacing Escherichia coli O26:H11 Strains Recovered from Bovine Feces in the United States [Food Microbiology]

    • Applied and Environmental Microbiology
    • Escherichia coli O26 has been identified as the most common non-O157 Shiga toxin-producing E. coli (STEC) serogroup to cause human illnesses in the United States and has been implicated in outbreaks around the world. E. coli has high genomic plasticity, which facilitates the loss or acquisition of virulence genes. Attaching and effacing E.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  2. Diversity of Shiga Toxin-Producing Escherichia coli (STEC) O26:H11 Strains Examined via stx Subtypes and Insertion Sites of Stx and EspK Bacteriophages [Food Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) is a food-borne pathogen that may be responsible for severe human infections. Only a limited number of serotypes, including O26:H11, are involved in the majority of serious cases and outbreaks. The main virulence factors, Shiga toxins (Stx), are encoded by bacteriophages. Seventy-four STEC O26:H11 strains of various origins (including human, dairy, and cattle) were characterized for their stx subtypes and Stx phage chromosomal insertion sites.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  3. Development of a quantitative real time PCR assay to detect and enumerate Escherichia coli O157 and O26 serogroups in bovine recto-anal swabs

    • Journal of Microbiological Methods
    • Publication date: July 2015
      , Volume 114
      Author(s): Dolapo Lawal , Catherine Burgess , Evonne McCabe , Paul Whyte , Geraldine Duffy

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  4. Assessing the Public Health Risk of Shiga Toxin-Producing Escherichia coli by Use of a Rapid Diagnostic Screening Algorithm [Bacteriology]

    • Journal of Clinical Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) is an enteropathogen of public health concern because of its ability to cause serious illness and outbreaks. In this prospective study, a diagnostic screening algorithm to categorize STEC infections into risk groups was evaluated. The algorithm consists of prescreening stool specimens with real-time PCR (qPCR) for the presence of stx genes.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  5. Development of Three Multiplex PCR Assays Targeting the 21 Most Clinically Relevant Serogroups Associated with Shiga Toxin-Producing E. coli Infection in Humans

    • PLOS ONE
    • Sergio Sánchez, María Teresa Llorente, María Aurora Echeita, Silvia Herrera-León

      • Shigella
      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  6. Serogroup-Specific Bacterial Engineered Glycoproteins as Novel Antigenic Targets for Diagnosis of Shiga Toxin-Producing-Escherichia coli-Associated Hemolytic-Uremic Syndrome [Bacteriology]

    • Journal of Clinical Microbiology
    • Human infection with Shiga toxin-producing Escherichia coli (STEC) is a major cause of postdiarrheal hemolytic-uremic syndrome (HUS), a life-threatening condition characterized by hemolytic anemia, thrombocytopenia, and acute renal failure. E. coli O157:H7 is the dominant STEC serotype associated with HUS worldwide, although non-O157 STEC serogroups can cause a similar disease. The detection of anti-O157 E.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  7. Characteristics of Emerging Human-Pathogenic Escherichia coli O26:H11 Strains Isolated in France between 2010 and 2013 and Carrying the stx2d Gene Only [Bacteriology]

    • Journal of Clinical Microbiology
    • Strains of Escherichia coli O26:H11 that were positive for stx2 alone (n = 23), which were not epidemiologically related or part of an outbreak, were isolated from pediatric patients in France between 2010 and 2013. We were interested in comparing these strains with the new highly virulent stx2a-positive E.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  8. Effect of High Pressure Processing on the survival of Shiga Toxin-Producing Escherichia coli (Big Six vs. O157:H7) in ground beef

    • Food Microbiology
    • Publication date: June 2015
      , Volume 48
      Author(s): HsinYun Hsu , Shiowshuh Sheen , Joseph Sites , Jennifer Cassidy , Butch Scullen , Christopher Sommers

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  9. Prevalence of subtilase cytotoxin-encoding subAB variants among Shiga toxin-producing Escherichia coli strains isolated from wild ruminants and sheep differs from that of cattle and pigs and is predominated by the new allelic variant subAB2-2

    • International Journal of Medical Microbiology
    • Publication date: January 2015
      , Volume 305, Issue 1
      Author(s): Magdalena T. Nüesch-Inderbinen , Joschua Funk , Nicole Cernela , Taurai Tasara , Jochen Klumpp , Herbert Schmidt , Roger Stephan

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  10. Successful detection of pathogenic Shiga-toxin-producing Escherichia coli in shellfish, environmental waters and sediment using the ISO/TS-13136 method

    • Letters in Applied Microbiology
    • The presence of highly pathogen STEC in shellfish, upstream waters and sediment from coastal shellfish sites was evaluated using the ISO/TS-13136 method. Shellfish (oysters, mussels and cockles), water and sediment samples were collected monthly over a period of one year.

      • Enterohemorrhagic Escherichia coli
  11. The efficacy of short and repeated high-pressure processing treatments on the reduction of non-O157:H7 Shiga-toxin producing Escherichia coli in ground beef patties

    • Meat Science
    • Publication date: April 2015
      , Volume 102
      Author(s): Yun Jiang , Joshua A. Scheinberg , Reshani Senevirathne , Catherine N. Cutter

      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
  12. A new pyrosequencing assay for rapid detection and genotyping of Shiga toxin, intimin and O157-specific rfbE genes of Escherichia coli

    • Journal of Microbiological Methods
    • Publication date: February 2015
      , Volume 109
      Author(s): Noriko Goji , Amit Mathews , George Huszczynski , Chad R. Laing , Victor P.J. Gannon , Morag R. Graham , Kingsley K. Amoako

      • Shigella
      • Enterohemorrhagic Escherichia coli