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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 226 - 250 of 429

  1. Effects of acidic water tempering and heat treatment on the Shiga toxin‐producing Escherichia coli (O121 and O26) load of wheat during tempering and its impact on wheat flour quality

    • Journal of Food Processing and Preservation
    • Journal of Food Processing and Preservation, Accepted Article. The study investigated the effects of acidic water (sodium bisulfate, SBS /lactic acid, LA) tempering (alone) and in combination with heat treatment on Shiga toxin- producing E. coli (STEC) O121 and O26 load of wheat and its impact on wheat flour quality.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  2. Occurrence of the seven most common serotypes of Shiga toxin-producing Escherichia coli in beef cuts produced in meat-processing plants in the state of São Paulo, Brazil

    • Journal of Food Protection
    • Healthy cattle are considered the main reservoir of Shiga toxin-producing Escherichia coli (STEC) strains, so in some places in the world, products derived from beef are the most common source for disease outbreaks caused by these bacteria. Therefore, in order to guarantee that the beef produced by our slaughterhouses is safe, there is a need for continuous monitoring of these bacteria.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  3. Emergence of New ST301 Shiga Toxin-Producing Escherichia coli Clones Harboring Extra-Intestinal Virulence Traits in Europe

    • Toxins
    • O80:H2 enterohemorrhagic Escherichia coli (EHEC) of sequence type ST301 is one of the main serotypes causing European hemolytic and uremic syndrome, but also invasive infections, due to extra-intestinal virulence factors (VFs). Here, we determined whether other such heteropathotypes exist among ST301. EnteroBase was screened for ST301 strains that were included in a general SNP-phylogeny. French strains belonging to a new heteropathotype clone were sequenced.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  4. Delayed lactose utilization among Shiga toxin-producing Escherichia coli of serogroup O121

    • Food Microbiology
    • Author(s): Alexander Gill, Tanis McMahon, Forest Dussault, Karen Jinneman, Rebecca Lindsey, Haley Martin, Devon Stoneburg, Nancy Strockbine, June Wetherington, Peter Feng

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  5. Characterization of Shiga Toxin 2a Encoding Bacteriophages Isolated From High-Virulent O145:H25 Shiga Toxin-Producing Escherichia coli

    • Frontiers in Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) may cause severe disease mainly due to the ability to produce Shiga toxins (Stx) encoded on bacteriophages. In Norway, more than 30% of the reported cases with STEC O145:H25 develop hemolytic uremic syndrome (HUS), and most cases, with known travel history, acquired the infection domestically.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  6. Fate of Salmonella and Enterohemorrhagic Escherichia coli on Wheat Grain

    • Journal of Food Protection
    • Wheat flour has been connected to outbreaks of foodborne illnesses with increased frequency in recent years, specifically, outbreaks involving Salmonella enterica and enterohemorrhagic Escherichia coli (EHEC). However, there is little information regarding the survival of these pathogens on wheat grain during long-term storage in a low-moisture environment. This study aims to evaluate the long-term survival of these enteric pathogens on wheat grain over the course of a year.

      • Salmonella
      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
      • Produce Safety
      • Post Harvest
  7. The emerging importance of Shiga toxin-producing Escherichia coli other than serogroup O157 in England

    • Microbiology
    • Shiga toxin-producing (STEC) can cause severe disease and large outbreaks. In England, the incidence and clinical significance of STEC serogroups other than O157 (non-O157) is unknown due to a testing bias for detection of STEC O157.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  8. Shiga Toxin-Producing Escherichia coli (STEC) and STEC-Associated Virulence Genes in Raw Ground Pork in Canada

    • Journal of Food Protection
    • Shiga toxin-producing Escherichia coli (STEC) O157:H7/NM and some non-O157 STEC are foodborne pathogens. In response to pork-associated O157 STEC outbreaks in Canada, we investigated the occurrence of STEC in Canadian retail raw ground pork during the period of November 1, 2014 and March 31, 2016. Isolated STEC were characterized to determine the Shiga-toxin gene ( stx ) subtype and the presence of virulence genes encoding intimin ( eae ), and enterohemorrhagic E. coli hemolysin (hlyA) .

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  9. Multilocus Variable-Number Tandem-Repeat Analysis of Enterohemorrhagic Escherichia coli Serogroups O157, O26, and O111 Based on a De Novo Look-Up Table Constructed by Regression Analysis

    • Foodborne Pathogens and Disease
    • Multilocus variable-number tandem-repeat analysis (MLVA) is a widely accepted molecular typing tool for enterohemorrhagic Escherichia coli (EHEC). However, ensuring the accuracy of MLVA data among multiple laboratories remains difficult. We developed a method of constructing adjusted look-up tables, which are necessary for MLVA profiling, at each laboratory using a regression analysis based on electrophoresis data from 24 in-house reference strains.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  10. Determination of the changes in the gastric fluid endurance of O157 and non-O157 Shiga toxin-producing Escherichia coli during storage of experimentally produced beef frankfurter

    • Journal of Food Science and Technology
    • Resistance of Shiga toxin-producing Escherichia coli (STEC) O157:H7 and serogroups O103, O26 and O145 to synthetic gastric fluid (SGF, pH 1.5) were investigated during frankfurter storage. Pathogens were inoculated (5 ± 1 log10 cfu g−1) on frankfurters and frankfurters were stored at 4 °C for 75 days in vacuum packages.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  11. Transmission Dynamics of Shiga Toxin-Producing Escherichia coli in New Zealand Cattle from Farm to Slaughter

    • Applied and Environmental Microbiology
    • Cattle are asymptomatic carriers of Shiga toxin-producing Escherichia coli (STEC) strains that can cause serious illness or death in humans. In New Zealand, contact with cattle feces and living near cattle populations are known risk factors for human STEC infection. Contamination of fresh meat with STEC strains also leads to the potential for rejection of consignments by importing countries.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  12. Validation of High-Resolution Melting Assays for the Detection of Virulent Strains of Escherichia coli O26 and O111 in Beef and Pork Enrichment Broths

    • Food Control
    • Author(s): Frank J. Velez, Joseph M. Bosilevac, Prashant Singh

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  13. Prevalence and Epidemiology of Non-O157 Escherichia coli Serogroups O26, O103, O111, and O145 and Shiga Toxin Gene Carriage in Scottish Cattle, 2014-2015

    • Applied and Environmental Microbiology
    • Cattle are a reservoir for Shiga toxin-producing Escherichia coli (STEC), zoonotic pathogens that cause serious clinical disease. Scotland has a higher incidence of STEC infection in the human population than the European average. The aim of this study was to investigate the prevalence and epidemiology of non-O157 serogroups O26, O103, O111, and O145 and Shiga toxin gene carriage in Scottish cattle.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Seasonal Produce
      • Produce Safety
  14. A Rationally Designed Bovine IgA Fc Scaffold Enhances in planta Accumulation of a VHH-Fc Fusion Without Compromising Binding to Enterohemorrhagic E. coli

    • Frontiers in Plant Science
    • We previously isolated a single domain antibody (VHH) that binds Enterohemorrhagic Escherichia coli (EHEC) with the end-goal being the enteromucosal passive immunization of cattle herds. To improve the yield of a chimeric fusion of the VHH with an IgA Fc, we employed two rational design strategies, supercharging and introducing de novo disulfide bonds, on the bovine IgA Fc component of the chimera.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  15. Phylogenetic context of Shiga toxin-producing Escherichia coli serotype O26:H11 in England

    • Microbiology
    • The increasing use of PCR for the detection of gastrointestinal pathogens in hospital laboratories in England has improved the detection of Shiga toxin-producing (STEC), and the diagnosis of haemolytic uraemic syndrome (HUS).

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  16. Molecular Detection of Antibiotic Resistance Genes in Shiga toxin-producing E. coli Isolated from Different Sources

    • Antibiotics
    • Shiga toxin-producing Escherichia coli (STEC) is an enteric pathogen associated with human gastroenteritis outbreaks. Extensive use of antibiotics in agriculture selects resistant bacteria that may enter the food chain and potentially causes foodborne illnesses in humans that are less likely to respond to treatment with conventional antibiotics.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  17. Replication Region Analysis Reveals Non-lambdoid Shiga Toxin Converting Bacteriophages

    • Frontiers in Microbiology
    • Shiga toxin is the major virulence factor of enterohemorrhagic Escherichia coli (EHEC), and the gene encoding it is carried within the genome of Shiga toxin-converting phages (Stx phages). Numerous Stx phages have been sequenced to gain a better understanding of their contribution to the virulence potential of EHEC. The Stx phages are classified into the lambdoid phage family based on similarities in lifestyle, gene arrangement, and nucleotide sequence to the lambda phages.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  18. Genomic Characterization of Two Shiga Toxin–Converting Bacteriophages Induced From Environmental Shiga Toxin–Producing Escherichia coli

    • Frontiers in Microbiology
    • Shiga toxin (Stx), encoded by stx genes located in prophage sequences, is the major agent responsible for the pathogenicity of Shiga toxin-producing Escherichia coli (STEC) and is closely associated with the development of hemolytic uremic syndrome (HUS). Although numerous Stx prophage sequences have been reported as part of STEC bacterial genomes, the information about the genomic characterization of Stx-converting bacteriophages induced from STEC strains is relatively scarce.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  19. Genomic Insights Into Clinical Shiga Toxin-Producing Escherichia coli Strains: A 15-Year Period Survey in Jönköping, Sweden

    • Frontiers in Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) are important foodborne pathogens that can cause human infections ranging from asymptomatic carriage to bloody diarrhea (BD) and fatal hemolytic uremic syndrome (HUS). However, the molecular mechanism of STEC pathogenesis is not entirely known.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  20. Differential induction of Shiga toxin in environmental Escherichia coli O145:H28 strains carrying the same genotype as the outbreak strains

    • International Journal of Food Microbiology
    • Author(s): Michelle Qiu Carter, Antares Pham, Wen-Xian Du, Xiaohua He

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  21. Seasonal Prevalence of Shiga Toxin-Producing Escherichia coli on Pork Carcasses for Three Steps of the Harvest Process at Two Commercial Processing Plants in the United States

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) is a foodborne pathogen that has a significant impact on public health, with strains possessing the attachment factor intimin referred to as enterohemorrhagic E. coli (EHEC) and associated with life-threatening illnesses. Cattle and beef are considered typical sources of STEC, but their presence in pork products is a growing concern. Therefore, carcasses (n = 1,536) at two U.S.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  22. Occurrence of ‘gang of five’ Shiga toxin‐producing Escherichia coli (STEC) serogroups on Belgian dairy cattle farms by overshoe sampling

    • Letters in Applied Microbiology
    • Shiga toxin‐producing Escherichia coli (STEC) are foodborne pathogens responsible for global outbreaks. This study was conducted to investigate the occurrence of ‘gang of five’ STEC serogroups (O26, O103, O111, O145, O157) on Belgian dairy cattle farms by overshoe (OVS) sampling, and to evaluate the presence of virulence genes in the obtained isolates.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  23. Effect of lactic acid stress on biofilm formation of Escherichia coli O26 at different temperatures

    • Journal of Food Safety
    • This study evaluated the effect of lactic acid stress on E. coli O26 biofilm formation at different temperatures. The strain 126Z with strong capacity and strain G13Z2 with medium capacity were selected for biofilm formation experiment in acidic TSB (pH 4.0 and 5.0, adjusted with lactic acid) at 15°C and 25°C, respectively. The effect of temperature on biofilm formation of different capacity strains was related to the pH value.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  24. Complete Genome Sequence of a Shiga Toxin-Producing Escherichia coli O26:H11 Strain (Sequence Type 21) and Two Draft Genome Sequences of Listeria monocytogenes Strains (Clonal Complex 1 [CC1] and CC59) Isolated from Fresh Produce in Germany

    • Microbiology Resource Announcements
    • The complete genome sequence of a Shiga toxin-producing Escherichia coli (STEC) O26:H11 strain, MBT-5 (sequence type 21 [ST21], stx1a, stx2a, eae, ehxA), and two draft genome sequences of Listeria monocytogenes strains MBT-6 and MBT-7 belonging to the virulent sequence types 1 (ST1, clonal complex 1 [CC1]) and 59 (ST59, CC59), respectively, were determined. The strains were isolated in 2015 from ready-to-eat mixed greens in Germany.

      • Listeria monocytogenes
      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  25. Microbiological Survey of Wheat Flour Sold at Retail in Canada, 2018-2019

    • Journal of Food Protection
    • Following two O121 STEC outbreaks linked to wheat flour, this study was conducted to gain baseline information on the occurrence of bacterial pathogens and levels of indicator organisms in wheat flour in Canada. A total of 347 pre-packaged wheat flour samples were analyzed for Salmonella spp., Shiga Toxin-Producing Escherichia coli (STEC), Listeria monocytogenes ( L. monocytogenes ) , aerobic colony count (ACC), total coliforms, and generic Escherichia coli ( E. coli ) .

      • Listeria monocytogenes
      • Salmonella
      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens