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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 576 - 600 of 628

  1. Molecular Characterization of Shigella sonnei: An Increasingly Prevalent Etiologic Agent of Shigellosis in Guizhou Province, Southwest of China

    • PLOS ONE
    • Shijun Li, Jianping Wang, Xiaoyu Wei, Ying Liu, Lu You, Xia Luo, Guangpeng Tang, Qiangzheng Sun, Changyun Ye, Jianguo Xu, Dingming Wang

      Background

      • Shigella
      • Bacterial pathogens
  2. Macropinosomes are Key Players in Early Shigella Invasion and Vacuolar Escape in Epithelial Cells

    • PLOS Pathogens
    • Allon Weiner, Nora Mellouk, Noelia Lopez-Montero, Yuen-Yan Chang, Célia Souque, Christine Schmitt, Jost Enninga

      • Shigella
      • Bacterial pathogens
  3. FDA Escherichia coli Identification (FDA-ECID) Microarray: a Pangenome Molecular Toolbox for Serotyping, Virulence Profiling, Molecular Epidemiology, and Phylogeny [Methods]

    • Applied and Environmental Microbiology
    • Most Escherichia coli strains are nonpathogenic. However, for clinical diagnosis and food safety analysis, current identification methods for pathogenic E. coli either are time-consuming and/or provide limited information. Here, we utilized a custom DNA microarray with informative genetic features extracted from 368 sequence sets for rapid and high-throughput pathogen identification.

      • Shigella
      • Bacterial pathogens
  4. Shigella Antimicrobial Drug Resistance Mechanisms, 2004–2014

    • Emerging Infectious Diseases
    • To determine antimicrobial drug resistance mechanisms of Shigella spp., we analyzed 344 isolates collected in Switzerland during 2004–2014. Overall, 78.5% of isolates were multidrug resistant; 10.5% were ciprofloxacin resistant; and 2% harbored mph(A), a plasmid-mediated gene that confers reduced susceptibility to azithromycin, a last-resort antimicrobial agent for shigellosis.

      • Shigella
      • Bacterial pathogens
  5. Bacterial-mediated phagosomal escape [Microbiology]

    • Proceedings of the National Academy of Sciences
    • Upon entry into host cells, intracellular bacterial pathogens establish a variety of replicative niches. Although some remodel phagosomes, others rapidly escape into the cytosol of infected cells. Little is currently known regarding how professional intracytoplasmic pathogens, including Shigella, mediate phagosomal escape. Shigella, like many other Gram-negative bacterial pathogens, uses a...

      • Shigella
      • Bacterial pathogens
  6. Visualizing the Translocation and Localization of Bacterial Type III Effector Proteins by Using a Genetically Encoded Reporter System [Methods]

    • Applied and Environmental Microbiology
    • Bacterial type III secretion system (T3SS) effector proteins are critical determinants of infection for many animal and plant pathogens. However, monitoring of the translocation and delivery of these important virulence determinants has proved to be technically challenging. Here, we used a genetically engineered LOV (light-oxygen-voltage) sensing domain derivative to monitor the expression, translocation, and localization of bacterial T3SS effectors.

      • Shigella
      • Bacterial pathogens
  7. A large family of anti-activators accompanying XylS/AraC family regulatory proteins

    • Molecular Microbiology
    • Summary

      • Shigella
      • Vibrio
      • Bacterial pathogens
  8. Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam [Bacteriology]

    • Journal of Clinical Microbiology
    • Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches.

      • Campylobacter
      • Norovirus
      • Shigella
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  9. Emergence of a Multidrug-Resistant Shiga Toxin-Producing Enterotoxigenic Escherichia coli Lineage in Diseased Swine in Japan [Clinical Veterinary Microbiology]

    • Journal of Clinical Microbiology
    • Enterotoxigenic Escherichia coli (ETEC) and Shiga toxin-producing E. coli (STEC) are important causes of diarrhea and edema disease in swine. The majority of swine-pathogenic E. coli strains belong to a limited range of O serogroups, including O8, O138, O139, O141, O147, O149, and O157, which are the most frequently reported strains worldwide.

      • Shigella
      • Bacterial pathogens
  10. Investigations of the effectiveness of nanoemulsions from sage oil as antibacterial agents on some food borne pathogens

    • LWT
    • Publication date: September 2016
      Source:LWT - Food Science and Technology, Volume 71

      Author(s): Roya Moghimi, Atousa Aliahmadi, David Julian McClements, Hasan Rafati

      • Shigella
      • Bacterial pathogens
  11. Prevalence and trends of bacterial contamination in fresh fruits and vegetables sold at retail in Canada

    • Food Control
    • Publication date: September 2016
      , Volume 67

      Author(s): Nelly Denis, Helen Zhang, Alexandre Leroux, Roger Trudel, Henri Bietlot

      • Campylobacter
      • Listeria monocytogenes
      • Shigella
      • Bacterial pathogens
  12. Toxins, Vol. 8, Pages 77: Shiga Toxins as Multi-Functional Proteins: Induction of Host Cellular Stress Responses, Role in Pathogenesis and Therapeutic Applications

    • Toxins
    • Shiga toxins (Stxs) produced by Shiga toxin-producing bacteria Shigella dysenteriae serotype 1 and select serotypes of Escherichia coli are primary virulence factors in the pathogenesis of hemorrhagic colitis progressing to potentially fatal systemic complications, such as hemolytic uremic syndrome and central nervous system abnormalities. Current therapeutic options to treat patients infected with toxin-producing bacteria are limited.

      • Shigella
      • Bacterial pathogens
  13. Effect of dietary protein sources on the small intestine microbiome of weaned piglets based on high-throughput sequencing

    • Letters in Applied Microbiology
    • Abstract

      • Shigella
      • Bacterial pathogens
  14. Development of a Flow Cytometry-Based Method for Rapid Detection of Escherichia coli and Shigella Spp. Using an Oligonucleotide Probe

    • PLOS ONE
    • Yong Xue, Jon G. Wilkes, Ted J. Moskal, Anna J. Williams, Willie M. Cooper, Rajesh Nayak, Fatemeh Rafii, Dan A. Buzatu

      • Shigella
      • Bacterial pathogens
  15. Ultrafiltration and Microarray for Detection of Microbial Source Tracking Marker and Pathogen Genes in Riverine and Marine Systems [Environmental Microbiology]

    • Applied and Environmental Microbiology
    • Pathogen identification and microbial source tracking (MST) to identify sources of fecal pollution improve evaluation of water quality. They contribute to improved assessment of human health risks and remediation of pollution sources. An MST microarray was used to simultaneously detect genes for multiple pathogens and indicators of fecal pollution in freshwater, marine water, sewage-contaminated freshwater and marine water, and treated wastewater.

      • Campylobacter
      • Shigella
      • Hepatitis
      • Bacterial pathogens
      • Viruses
  16. Evaluation of probiotic properties of Lactobacillus plantarum WLPL04 isolated from human breast milk

    • Journal of Dairy Science
    • Publication date: Available online 21 January 2016


      Author(s): Meiling Jiang, Fen Zhang, Cuixiang Wan, Yonghua Xiong, Nagendra P. Shah, Hua Wei, Xueying Tao

      • Listeria monocytogenes
      • Shigella
      • Cronobacter
      • Staphylococcus aureus
      • Bacterial pathogens
      • Bacillus cereus
  17. Synergistic Antimicrobial Effects of Organic Acids in Combination with Carvacrol Against Shigella Sonnei

    • Journal of Food Safety
    • Abstract

      • Shigella
      • Bacterial pathogens
  18. Development of a novel target-enriched multiplex PCR (Tem-PCR) assay for simultaneous detection of five foodborne pathogens

    • Food Control
    • Publication date: June 2016
      , Volume 64

      Author(s): Yi-Gang Xu, Zhong-Mei Liu, Bai-Qi Zhang, Min Qu, Chun-Sheng Mo, Jia Luo, Su-Long Li

      • Listeria monocytogenes
      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens
  19. The activity of Escherichia coli chaperone SurA is regulated by conformational changes involving a parvulin domain

    • Journal of Bacteriology
    • The periplasmic chaperone SurA is critical for the biogenesis of outer membrane proteins (OMPs) and thus the maintenance of membrane integrity in Escherichia coli. The activity of this modular chaperone has been attributed to a core chaperone module, with only minor importance assigned to the two SurA peptidyl-prolyl isomerase (PPIase) domains.

      • Shigella
      • Bacterial pathogens
  20. Quantitative proteomic analysis of Shigella flexneri and Shigella sonnei Generalized Modules for Membrane Antigens (GMMA) reveals highly pure preparations

    • International Journal of Medical Microbiology
    • Publication date: Available online 23 December 2015


      Author(s): Luana Maggiore, Lu Yu, Ulrich Omasits, Omar Rossi, Gordon Dougan, Nicholas R. Thomson, Allan Saul, Jyoti S. Choudhary, Christiane Gerke

      • Shigella
      • Bacterial pathogens
  21. Aetiology-Specific Estimates of the Global and Regional Incidence and Mortality of Diarrhoeal Diseases Commonly Transmitted through Food

    • PLOS ONE
    • Sara M. Pires, Christa L. Fischer-Walker, Claudio F. Lanata, Brecht Devleesschauwer, Aron J. Hall, Martyn D. Kirk, Ana S. R. Duarte, Robert E. Black, Frederick J. Angulo

      Background

      • Norovirus
      • Shigella
      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Viruses
  22. Characterisation of Shigella Spa33 and Thermotoga FliM/N reveals a new model for C-ring assembly in T3SS

    • Molecular Microbiology
    • Summary

      • Shigella
      • Bacterial pathogens
  23. Effect of X-ray treatments on Escherichia coli O157:H7, Listeria monocytogenes, Shigella flexneri, Salmonella enterica and inherent microbiota on whole mangoes

    • Letters in Applied Microbiology
    • Abstract

      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Shigella
      • Bacterial pathogens
  24. The Multivalent Adhesion Molecule SSO1327 plays a key role in Shigella sonnei pathogenesis

    • Molecular Microbiology
    • Summary

      • Shigella
      • Bacterial pathogens
  25. Effect of Bacillus subtilis CGMCC 1.1086 on the growth performance and intestinal microbiota of broilers

    • Journal of Applied Microbiology
    • Abstract

      Aims

      Probiotics have been proved to be the most preferred and effective alternative to antibiotics as growth promoter and pathogens inhibitor in poultry industry. In this study Bacillus subtilis CGMCC 1.1086 as a probiotic bacterium was administered in diet and its effects on both the growth performance and the cecal microbiota of broilers were evaluated.

      • Shigella
      • Vibrio
      • Staphylococcus aureus
      • Bacterial pathogens