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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 301 - 325 of 692

  1. Multiresidue determination of antibiotics in ready‐to‐eat duck eggs marketed through e‐commerce stores in China and subsequent assessment of dietary risks to consumers

    • Journal of Food Science
    • Journal of Food Science, EarlyView. In this work, the occurrence of 34 common antibiotic (15 sulfonamides and 19 quinolones) residues were evaluated in 236 ready‐to‐eat duck eggs (salted and preserved duck eggs) marketed through e‐commerce stores by ultra‐performance liquid chromatography coupled to tandem mass spectrometry, and subsequent dietary risk assessments for Chinese consumers were conducted.

      • Antibiotic residues
      • Chemical contaminants
  2. Contribution of Quasifibrillar Properties of Collagen Hydrolysates Towards Lowering of Interface Tension in Emulsion-Based Food Leading to Shelf-Life Enhancement

    • Food and Bioprocess Technology
    • This study was conducted to decipher the mechanism of emulsion-based food stabilization by fish-derived collagen hydrolysate. Collagen type I was isolated from seven fish processing by-products with yields ranging from 9.15 to 92.38%. The isolated samples had a mass of 110–120kDa and eluted at 30.44% NaCl in ion-exchange chromatography. The collagen samples were enzymatically digested to obtain collagen hydrolysate (CH) with mass <6kDa.

      • Antibiotic residues
      • Chemical contaminants
  3. Distinct Resistomes and Microbial Communities of Soils, Wastewater Treatment Plants and Households Suggest Development of Antibiotic Resistances Due to Distinct Environmental Conditions in Each Environment

    • Antibiotics
    • The use of antibiotics in humans and animals results in a release of excess antibiotic residues into the environment through wastewaters and insufficient removal in wastewater treatment plants (WWTP), leading to increasing numbers of bacteria enriched in antibiotic resistance genes (ARG). However, the potential transfer of ARG and their host bacteria between different environments remains largely unexplored.

      • Antibiotic residues
      • Chemical contaminants
  4. Whole genome sequencing of a clinical drug resistant Candida albicans isolate reveals known and novel mutations in genes involved in resistance acquisition mechanisms

    • Microbiology
    • is an opportunistic pathogen accounting for the majority of cases of infections. Currently, are developing resistance towards different classes of antifungal drugs and this has become a global health burden that does not spare Lebanon.

      • Antibiotic residues
      • Chemical contaminants
  5. Mechanistic Insight into the Peptide Binding Modes to Two M. tb MazF Toxins

    • Toxins
    • Tuberculosis (TB) is a contagious disease caused by Mycobacterium tuberculosis (M. tb). It is regarded as a major health threat all over the world, mainly because of its high mortality and drug-resistant nature. Toxin-antitoxin (TA) systems are modules ubiquitously found in prokaryotic organisms, and the well-studied MazEF systems (MazE means “what is it?” in Hebrew) are implicated in the formation of “persister cells” in the M. tb pathogen. Here, we report cocrystal structures of M.

      • Antibiotic residues
      • Bacterial pathogens
      • Chemical contaminants
  6. Anaerobic Digestion and Removal of Sulfamethoxazole, Enrofloxacin, Ciprofloxacin and Their Antibiotic Resistance Genes in a Full-Scale Biogas Plant

    • Antibiotics
    • Anaerobic digestion is one of the best ways to re-use animal manure and agricultural residues, through the production of combustible biogas and digestate. However, the use of antibiotics for preventing and treating animal diseases and, consequently, their residual concentrations in manure, could introduce them into anaerobic digesters.

      • Antibiotic residues
      • Chemical contaminants
  7. Cryptic {beta}-Lactamase Evolution Is Driven by Low {beta}-Lactam Concentrations

    • mSphere
    • ABSTRACT Our current understanding of how low antibiotic concentrations shape the evolution of contemporary β-lactamases is limited. Using the widespread carbapenemase OXA-48, we tested the long-standing hypothesis that selective compartments with low antibiotic concentrations cause standing genetic diversity that could act as a gateway to developing clinical resistance.

      • Bacterial pathogens
      • Chemical contaminants
      • Antibiotic residues
  8. In Crystallo Time-Resolved Interaction of the Clostridioides difficile CDD-1 enzyme with Avibactam Provides New Insights into the Catalytic Mechanism of Class D β-lactamases

    • ACS Infectious Diseases
    • Class D β-lactamases have risen to notoriety due to their wide spread in bacterial pathogens, propensity to inactivate clinically important β-lactam antibiotics, and ability to withstand inhibition by the majority of classical β-lactamase inhibitors. Understanding the catalytic mechanism of these enzymes is thus vitally important for the development of novel antibiotics and inhibitors active against infections caused by antibiotic-resistant bacteria.

      • Antibiotic residues
      • Chemical contaminants
  9. High Throughput Virtual Screening and Molecular Dynamics Simulation for Identifying a Putative Inhibitor of Bacterial CTX-M-15

    • Antibiotics
    • Multidrug resistant bacteria are a major therapeutic challenge. CTX-M-type enzymes are an important group of class A extended-spectrum β-lactamases (ESBLs). ESBLs are the enzymes that arm bacterial pathogens with drug resistance to an array of antibiotics, notably the advanced-generation cephalosporins. The current need for an effective CTX-M-inhibitor is high.

      • Antibiotic residues
      • Chemical contaminants
  10. Computational Simulations Identified Marine-Derived Natural Bioactive Compounds as Replication Inhibitors of SARS-CoV-2

    • Frontiers in Microbiology
    • The rapid spread of COVID-19, caused by the novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is a worldwide health emergency. Unfortunately, to date, a very small number of remedies have been to be found effective against SARS-CoV-2 infection. Therefore, further research is required to achieve a lasting solution against this deadly disease.

      • Antibiotic residues
      • Chemical contaminants
  11. Inhibition of Pseudomonas aeruginosa Alginate Synthesis by Ebselen Oxide and Its Analogues

    • ACS Infectious Diseases
    • Pseudomonas aeruginosa is a Gram-negative opportunistic pathogen that is frequently found in the airways of cystic fibrosis (CF) patients due to the dehydrated mucus that collapses the underlying cilia and prevents mucociliary clearance. During this life-long chronic infection, P. aeruginosa cell accumulates mutations that lead to inactivation of the mucA gene that results in the constitutive expression of algD-algA operon and the production of alginate exopolysaccharide.

      • Chemical contaminants
      • Heavy Metals
      • Antibiotic residues
  12. Emergence of Two AcrB Substitutions Conferring Multidrug Resistance to Salmonella spp.

    • Antimicrobial Agents and Chemotherapy
    • AcrAB-TolC is a major tripartite multidrug efflux pump conferring resistance to a wide variety of compounds in Gram-negative pathogens. Many AcrB mutants have been constructed through site-directed mutagenesis to probe the mechanism of AcrB function in antibiotic resistance. However, much less is known about the actual drug resistance-related mutants that naturally occur in clinically isolated pathogens.

      • Salmonella
      • Antibiotic residues
      • Chemical contaminants
      • Bacterial pathogens
  13. Staphylococcus aureus Tet38 Efflux Pump Structural Modeling and Roles of Essential Residues in Drug Efflux and Host Cell Internalization

    • Infection and Immunity
    • The Staphylococcus aureus Tet38 membrane protein has distinct functions, including drug efflux and host cell attachment and internalization mediated by interaction with host cell CD36. Using structural modeling and site-directed mutagenesis, we identified key amino acids involved in different functions. Tet38, a member of the major facilitator superfamily, is predicted to have 14 transmembrane segments (TMS), 6 cytoplasmic loops, and 7 external loops.

      • Antibiotic residues
      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
  14. High-Coverage Screening of Sulfonamide Metabolites in Goat Milk by Magnetic Doped S Graphene Combined with Ultrahigh-Performance Liquid Chromatography–High-Resolution Mass Spectrometry

    • Journal of Agricultural and Food Chemistry
    • Currently, there are more than 1000 varieties of synthetic sulfonamides universally used as antibiotics causing severe results of potential carcinogenicity and drug resistance for human health due to excessive residue of animal-derived food. A facile and novel approach for untargeted screening of sulfonamides (SAs) and metabolites was proposed based on magnetic solid-phase extraction–ultrahigh-performance liquid chromatography–tandem high-resolution mass spectrometry (MSPE-UHPLC-HRMS).

      • Chemical contaminants
      • Antibiotic residues
  15. Antimicrobial Use, Residues, Resistance and Governance in the Food and Agriculture Sectors, Tanzania

    • Antibiotics
    • All infections are potentially curable as long as the etiological agents are susceptible to antimicrobials. The increased rate at which antimicrobials are becoming ineffective is a global health risk of increasing concern that threatens withdrawal of beneficial antimicrobials for disease control.

      • Salmonella
      • Staphylococcus aureus
      • Chemical contaminants
      • Antibiotic residues
      • Bacterial pathogens
  16. Presence of Antibiotic Residues and Antibiotic Resistant Bacteria in Cattle Manure Intended for Fertilization of Agricultural Fields: A One Health Perspective

    • Antibiotics
    • Antibiotic resistant bacteria and antibiotic residues can enter the environment when using animal manure as fertilizer. Twenty-five mixed beef cattle farmyard manure samples and 9 mixed fattening calf slurry samples from different farms across Belgium were investigated for the presence of 69 antibiotic residues, antibiotic resistant Escherichia coli and Salmonella spp.

      • Bacterial pathogens
      • Chemical contaminants
      • Salmonella
      • Antibiotic residues
  17. Poultry Litter Contamination by Escherichia coli Resistant to Critically Important Antimicrobials for Human and Animal Use and Risk for Public Health in Cameroon

    • Antibiotics
    • Residues of antimicrobials used in farm can exert selective pressure and accelerate the occurrence of multidrug resistant bacteria in litter. This study aimed to investigate the resistance profile of Escherichia coli isolated from poultry litter. A total of 101 E. coli strains was isolated from 229 litter samples collected and stored for two months in the laboratory at room temperature. Antimicrobial susceptibility testing was performed using the disk diffusion method.

      • Antibiotic residues
      • Bacterial pathogens
      • Chemical contaminants
  18. Onsite/on‐field analysis of pesticide and veterinary drug residues by a state‐of‐art technology: A review

    • Journal of Separation Science
    • Journal of Separation Science, Accepted Article. Pesticides and veterinary drugs are generally employed to control pests and insects in crop and livestock farming. However, remaining residues are considered potentially hazardous to human health and the environment. Therefore, regular monitoring is required for assessing and legislation of pesticides and veterinary drugs. Various approaches to determining residues in various agricultural and animal food products have been reported.

      • Chemical contaminants
      • Antibiotic residues
      • Pesticide residues
  19. Selection of ESBL-producing Escherichia coli in the gut of calves experimentally fed with milk containing antibiotic residues

    • Veterinary Microbiology
    • Author(s): Véronique Dupouy, Jean-Yves Madec, Jessica Wucher, Nathalie Arpaillange, Véronique Métayer, Béatrice Roques, Alain Bousquet-Mélou, Marisa Haenni

      • Bacterial pathogens
      • Antibiotic residues
      • Chemical contaminants
  20. Behavior and Removal of Ciprofloxacin and Sulfamethoxazole Antibiotics in Three Different Types of Full-Scale Wastewater Treatment Plants: A Comparative Study

    • Water, Air, & Soil Pollution
    • Due to the inadequate removal rates of drug residues in wastewater treatment plants (WWTP), the transition of these compounds into the environment has become a serious environmental problem for ecosystems and public health.

      • Chemical contaminants
      • Antibiotic residues
  21. Assessing the Potency of β-Lactamase Inhibitors with Diverse Inactivation Mechanisms against the PenA1 Carbapenemase from Burkholderia multivorans

    • ACS Infectious Diseases
    • Burkholderia cepacia complex (Bcc) poses a serious health threat to people with cystic fibrosis or compromised immune systems. Infections often arise from Bcc strains, which are highly resistant to many classes of antibiotics, including β-lactams. β-Lactam resistance in Bcc is conferred largely via PenA-like β-lactamases. Avibactam was previously shown to be a potent inactivator of PenA1.

      • Antibiotic residues
      • Bacterial pathogens
      • Chemical contaminants
  22. Modulation of Gene Expression in Actinobacteria by Translational Modification of Transcriptional Factors and Secondary Metabolite Biosynthetic Enzymes

    • Frontiers in Microbiology
    • Different types of post-translational modifications are present in bacteria that play essential roles in bacterial metabolism modulation. Nevertheless, limited information is available on these types of modifications in actinobacteria, particularly on their effects on secondary metabolite biosynthesis. Recently, phosphorylation, acetylation, or phosphopantetheneylation of transcriptional factors and key enzymes involved in secondary metabolite biosynthesis have been reported.

      • Antibiotic residues
      • Chemical contaminants
  23. Development of a surfactant‐assisted dispersive solid phase extraction using deep eutectic solvent to extract four tetracycline antibiotics residues in milk samples

    • Journal of Separation Science
    • Journal of Separation Science, Accepted Article. In this study, a new floating dispersive solid phase extraction method based on deep eutectic solvents has been developed in a home–made extraction device for the extraction of four tetracycline antibiotics from milk samples. In this approach, the sorbent (activated carbon) was dispersed in whole parts of solution with the aid of air stream and floated on top of the solution with the aid of the surfactant (lauryl betaine) and air bubbles.

      • Antibiotic residues
      • Chemical contaminants
  24. Anti-asthmatic effect of nitric oxide metallo-donor FOR811A [cis-[Ru(bpy)2(2-MIM)(NO)](PF6)3] in the respiratory mechanics of Swiss mice

    • PLOS ONE
    • by Paula Priscila Correia Costa, Stefanie Bressan Waller, Gilvan Ribeiro dos Santos, Fladimir de Lima Gondim, Daniel Silveira Serra, Francisco Sales Ávila Cavalcante, Florêncio Sousa Gouveia Júnior, Valdir Ferreira de Paula Júnior, Eduardo Henrique Silva Sousa, Luiz Gonzaga de França Lopes, Wesley Lyeverton Correia Ribeiro, Helena Serra Azul Monteiro

      • Chemical contaminants
      • Antibiotic residues
  25. Rapid detection of antibiotic residues in animal products using surface-enhanced Raman Spectroscopy: A review

    • Food Control
    • Author(s): Mogos Girmatsion, Abdu Mahmud, Bereket Abraha, Yunfei Xie, Yuliang Cheng, Hang Yu, Weirong Yao, Yahui Guo, He Qian

      • Chemical contaminants
      • Antibiotic residues