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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 101 - 125 of 368

  1. Integrative omics analysis highlights the immunomodulatory effects of the parasitic dinoflagellate hhematodinium on crustacean hemocytes

    • Fish & Shellfish Immunology
    • Parasitic dinoflagellates in genus Hematodinium have caused substantial economic losses to multiple commercially valuable marine crustaceans around the world. Recent efforts to better understand the life cycle and biology of the parasite have improved our understanding of the disease ecology.

      • Natural toxins
      • Shellfish toxins
  2. Simultaneous determination of okadaic acid, dinophysistoxin-1, dinophysistoxin-2, and dinophysistoxin-3 using liquid chromatography-tandem mass spectrometry in raw and cooked food matrices

    • Food Control
    • Diarrheic shellfish poison produced by toxic algae (e.g., Dynophysis sp.) adversely affects humans and marine ecosystems. Contamination occurs mainly from bivalve mollusks like mussels, but contamination from fishes (e.g., flatfish) has also recently been reported.

      • Natural toxins
      • Shellfish toxins
  3. Bioaccessibility of paralytic shellfish toxins in different cooked shellfish using the simulated digestive model

    • Food Chemistry
    • Current regulatory limit values for paralytic shellfish toxins (PSTs) in shellfish products are not considering the bioaccessibility of PSTs in seafood matrix during the gastrointestinal digestion for human beings. In this study, the bioaccessibility of PSTs in the shellfish cooked by different ways was assessed using a static in vitro human digestion model.

      • Natural toxins
      • Shellfish toxins
  4. A Fluorescence Immunochromatographic Strip Based on Quantum Dot Nanobeads for the Rapid Detection of Okadaic Acid

    • Food Analytical Methods
    • A fluorescence immunochromatographic strip using quantum dot nanobeads (QDNBs)-monoclonal antibody (McAb) conjugates was developed to rapidly detecting okadaic acid (OA) in shellfish. Under optimal conditions, the linear working range was 0.62–20 ng·mL−1, and the full competitive limit of detection (LOD) was 20 ng·mL−1, corresponding to 160 μg·kg−1 per shellfish, meeting the regulatory limit of European Conformity (EC).

      • Natural toxins
      • Shellfish toxins
  5. Alignment-Free Analysis of Whole-Genome Sequences From Symbiodiniaceae Reveals Different Phylogenetic Signals in Distinct Regions

    • Frontiers in Plant Science
    • Dinoflagellates of the family Symbiodiniaceae are predominantly essential symbionts of corals and other marine organisms. Recent research reveals extensive genome sequence divergence among Symbiodiniaceae taxa and high phylogenetic diversity hidden behind subtly different cell morphologies. Using an alignment-free phylogenetic approach based on sub-sequences of fixed length k (i.e.

      • Natural toxins
      • Shellfish toxins
  6. Assessment of the Appearance and Toxin Production Potential of Invasive Nostocalean Cyanobacteria Using Quantitative Gene Analysis in Nakdong River, Korea

    • Toxins
    • Invasive nostocalean cyanobacteria (INC) were first reported in tropical regions and are now globally spreading rapidly due to climate change, appearing in temperate regions. INC require continuous monitoring for water resource management because of their high toxin production potential. However, it is difficult to analyze INC under a microscope because of their morphological similarity to nostocalean cyanobacteria such as the genus Aphanizomenon.

      • Natural toxins
      • Shellfish toxins
  7. On the Hunt for New Toxin Families Produced by a Mediterranean Strain of the Benthic Dinoflagellate Ostreopsis cf. ovata

    • Toxins
    • Ostreopsis cf. ovata is a benthic dinoflagellate known to produce palytoxin (PLTX) and its analogues. Recent investigations suggested the production of unknown toxins by a Mediterranean strain. In the present work, two new families of toxins, potentially novel in their structures, were purified from this same Mediterranean strain of Ostreopsis cf. ovata.

      • Natural toxins
      • Shellfish toxins
  8. Parasitic infections by Group II Syndiniales target selected dinoflagellate host populations within diverse protist assemblages in a model coastal pond

    • Environmental Microbiology
    • Environmental Microbiology, Accepted Article. Protists are integral to marine food webs and biogeochemical cycles; however, there is a paucity of data describing specific ecological niches for some of the most abundant taxa in marker gene libraries. Syndiniales are one such group, often representing the majority of sequence reads recovered from picoplankton samples across the global ocean.

      • Natural toxins
      • Shellfish toxins
  9. Thermal Acclimation and Adaptation in Marine Protozooplankton and Mixoplankton

    • Frontiers in Microbiology
    • Proper thermal adaptation is key to understanding how species respond to long-term changes in temperature. However, this is seldom considered in protozooplankton and mixoplankton experiments. In this work, we studied how two heterotrophic dinoflagellates (Gyrodinium dominans and Oxyrrhis marina), one heterotrophic ciliate (Strombidium arenicola), and one mixotrophic dinoflagellate (Karlodinium armiger) responded to warming.

      • Natural toxins
      • Shellfish toxins
  10. Identification of novel paralytic shellfish toxin binding protein via homology modeling and molecular docking

    • Toxicon
    • A paralytic shellfish toxin binding protein (PST-BP) was extracted and purified from the viscera of oyster (Crassostrea hongkongensis) that accumulates paralytic shellfish toxin (PST), and the amino acid sequence of the protein was detected via HPLC-MS-MS. The structure of the PST-BP was built by homology modeling, and the interaction between PST and PST-BP was studied using molecular docking. The results showed that the purity of PST-BP was more than 99.8% after the purification.

      • Natural toxins
      • Shellfish toxins
  11. Marine toxin domoic acid induces moderate toxicological response in non-target HepG2 cells

    • Toxicology
    • Domoic acid (DA) is a marine neurotoxin produced as a defence compound by diatom Pseudo-nitzschia. Although its toxicity is well known in marine mammals and fish, data on DA cyto/genotoxicity in human non-target cells is still limited. Hence, we aimed to study the effect of DA (0.001 to 10 µg/mL) on cell viability and proliferation kinetics of human hepatocellular carcinoma (HepG2) cells as well as DNA damage induction after 4, 24 and 72 h of exposure.

      • Natural toxins
      • Shellfish toxins
  12. Assessment of Common Cyanotoxins in Cyanobacteria of Biological Loess Crusts

    • Toxins
    • Cyanotoxins are a diverse group of bioactive compounds produced by cyanobacteria that have adverse effects on human and animal health. While the phenomenon of cyanotoxin production in aquatic environments is well studied, research on cyanotoxins in terrestrial environments, where cyanobacteria abundantly occur in biocrusts, is still in its infancy.

      • Natural toxins
      • Shellfish toxins
  13. Okadaic Acid Depuration from the Cockle Cerastoderma edule

    • Toxins
    • The cockle Cerastoderma edule is a commercially important species in many European Countries. It can accumulate okadaic acid (OA) and other toxins in its group, which makes it unsuitable for human consumption, producing harvesting bans to avoid intoxications. The duration of those bans depends in part on the depuration kinetics of the toxin in this species.

      • Natural toxins
      • Shellfish toxins
  14. Rewiring the Metabolic Network to Increase Docosahexaenoic Acid Productivity in Crypthecodinium cohnii by Fermentation Supernatant-Based Adaptive Laboratory Evolution

    • Frontiers in Microbiology
    • Docosahexaenoic acid (DHA, 22:6n-3) plays significant roles in enhancing human health and preventing human diseases. The heterotrophic marine dinoflagellate Crypthecodinium cohnii is a good candidate to produce high-quality DHA. To overcome the inhibition caused by the fermentation supernatant in the late fermentation stage of DHA-producing C. cohnii, fermentation supernatant-based adaptive laboratory evolution (FS-ALE) was conducted.

      • Natural toxins
      • Shellfish toxins
  15. Integrated Omic Analyses Identify Pathways and Transcriptomic Regulators Associated With Chemical Alterations of In Vitro Neural Network Formation

    • Toxicological Sciences
    • Development of in vitro new approach methodologies has been driven by the need for developmental neurotoxicity (DNT) hazard data on thousands of chemicals. The network formation assay characterizes DNT hazard based on changes in network formation but provides no mechanistic information. This study investigated nervous system signaling pathways and upstream physiological regulators underlying chemically induced neural network dysfunction.

      • Natural toxins
      • Shellfish toxins
  16. Revisiting the HPLC-FLD Method to Quantify Paralytic Shellfish Toxins: C3,4 Quantification and the First Steps towards Validation

    • Toxins
    • Paralytic shellfish toxins (PSTs) are a large group of biotoxins that cause paralytic shellfish poisoning. Their appearance in natural waters and their ingestion by aquatic species have a huge socio-economic impact, whereby their monitoring is of the upmost relevance to minimize the consequences. For earlier detection and faster response/action by stakeholders, validation of adjusted analytical methods, particularly for lower concentration levels, is important.

      • Natural toxins
      • Shellfish toxins
  17. Genome-powered classification of microbial eukaryotes: focus on coral algal symbionts

    • Trends in Microbiology
    • Modern microbial taxonomy generally relies on the use of single marker genes or sets of concatenated genes to generate a framework for the delineation and classification of organisms at different taxonomic levels. However, given that DNA is the 'blueprint of life', and hence the ultimate arbiter of taxonomy, classification systems should attempt to use as much of the blueprint as possible to capture a comprehensive phylogenetic signal.

      • Natural toxins
      • Shellfish toxins
  18. Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii

    • Archives of Microbiology
    • A bacterial strain, designated J12C1-MA-4T, was isolated from liquid culture of the dinoflagellate Ceratoperidinium margalefii. The bacterium was Gram-negative, aerobic, and rod-shaped. Oxidase and catalase were positive. Optimal growth was observed at 30 °C, pH 7.0, in the presence of 1% (w/v) NaCl.

      • Natural toxins
      • Shellfish toxins
  19. Freshwater Microbial Eukaryotic Core Communities, Open-Water and Under-Ice Specialists in Southern Victoria Island Lakes (Ekaluktutiak, NU, Canada)

    • Frontiers in Microbiology
    • Across much of the Arctic, lakes and ponds dominate the landscape. Starting in late September, the lakes are covered in ice, with ice persisting well into June or early July. In summer, the lakes are highly productive, supporting waterfowl and fish populations. However, little is known about the diversity and ecology of microscopic life in the lakes that influence biogeochemical cycles and contribute to ecosystem services.

      • Natural toxins
      • Shellfish toxins
  20. Alexandriicola marinus gen. nov., sp. nov., a new member of the family Rhodobacteraceae isolated from marine phycosphere

    • Antonie van Leeuwenhoek
    • Two yellow-pigmented bacterial strains, LZ-14 T and ABI-LZ29, were isolated from the cultivable phycosphere microbiota of the highly toxic marine dinoflagellate Alexandrium catenella LZT09 and demonstrated obvious microalgae growth-promoting potentials toward the algal host. To elucidate the taxonomic status of the two bioactive bacterial strains, they were subjected to a polyphasic taxonomic characterization.

      • Natural toxins
      • Shellfish toxins
  21. Domoic acid biosynthesis in the red alga Chondria armata suggests a complex evolutionary history for toxin production

    • Proceedings of the National Academy of Sciences
    • Domoic acid (DA), the causative agent of amnesic shellfish poisoning, is produced by select organisms within two distantly related algal clades: planktonic diatoms and red macroalgae. The biosynthetic pathway to isodomoic acid A was recently solved in the harmful algal bloom–forming diatom Pseudonitzschia multiseries, establishing the genetic basis for the...

      • Natural toxins
      • Shellfish toxins
  22. Development of a Method for Detecting Alexandrium pacificum Based on the Quantification of sxtA4 by Chip-Based Digital PCR

    • Toxins
    • Alexandrium pacificum, which produces the paralytic shellfish toxin (PST) saxitoxin (STX), is one of the causative species of paralytic shellfish poisoning outbreaks in coastal areas of Korea. In this study, we developed a chip-based digital PCR (dPCR) method for A. pacificum detection and tested it for monitoring in Jinhae-Masan Bay. Using the sequence of an A.

      • Natural toxins
      • Shellfish toxins
  23. The Caspase Homologues in Scallop Chlamys farreri and Their Expression Responses to Toxic Dinoflagellates Exposure

    • Toxins
    • The cysteine aspartic acid-specific protease (caspase) family is distributed across vertebrates and invertebrates, and its members are involved in apoptosis and response to cellular stress. The Zhikong scallop (Chlamys farreri) is a bivalve mollusc that is well adapted to complex marine environments, yet the diversity of caspase homologues and their expression patterns in the Zhikong scallop remain largely unknown.

      • Natural toxins
      • Shellfish toxins
  24. The Influence of Genes on the “Killer Plasmid” of Dinoroseobacter shibae on Its Symbiosis With the Dinoflagellate Prorocentrum minimum

    • Frontiers in Microbiology
    • The marine bacterium Dinoroseobacter shibae shows a Jekyll-and-Hyde behavior in co-culture with the dinoflagellate Prorocentrum minimum: In the initial symbiotic phase it provides the essential vitamins B12 (cobalamin) and B1 (thiamine) to the algae. In the later pathogenic phase it kills the dinoflagellate. The killing phenotype is determined by the 191 kb plasmid and can be conjugated into other Roseobacters. From a transposon-library of D.

      • Natural toxins
      • Shellfish toxins
  25. Detection and Quantification of the Harmful Dinoflagellate Margalefidinium polykrikoides (East Asian Ribotype) in the Coastal Waters of China

    • Toxins
    • As a marine ichthyotoxic dinoflagellate, Margalefidinium polykrikoides, previously named Cochlodinium polykrikoides, have caused mass mortalities of fish worldwide during blooms. Rapid detection of target species is a prerequisite for the timely monitoring and early warning of harmful algal blooms (HABs). However, it is difficult to achieve rapid identification with traditional methods.

      • Natural toxins
      • Shellfish toxins