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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 126 - 150 of 2779

  1. The occurrence and molecular detection of mcr-1 and mcr-5 genes in Enterobacteriaceae isolated from poultry and poultry meats in Malaysia

    • Frontiers in Microbiology
    • The advent of antimicrobials-resistant (AMR), including colistin-resistant bacteria, poses a significant challenge to animal and human health, food safety, socio-economic growth, and the global environment. This study aimed to ascertain the colistin resistance prevalence and molecular mechanisms of colistin resistance in Enterobacteriaceae.

      • Bacterial pathogens
      • Salmonella
  2. Enhanced probiotic potential of Lactobacillus kefiranofaciens OSU-BDGOA1 through co-culture with Kluyveromyces marxianus bdgo-ym6

    • Frontiers in Microbiology
    • Introduction Due to the increasing consumer demand for the development and improvement of functional foods containing probiotics, new probiotic candidates need to be explored as well as novel means to enhance their beneficial effects. Lactobacillus kefiranofaciens OSU-BDGOA1 is a strain isolated from kefir grains that has demonstrated probiotic traits.

      • Bacterial pathogens
      • Salmonella
  3. The correlation of the intestinal with pharyngeal microbiota in early neonates

    • Frontiers in Microbiology
    • Introduction The gut-lung axis has long been recognized as an important mechanism affecting intestinal and lung immunity.

      • Bacterial pathogens
      • Shigella
      • Staphylococcus aureus
  4. Segmented filamentous bacteria-based treatment to elicit protection against Enterobacteriaceae in Layer chickens

    • Frontiers in Microbiology
    • Introduction Gut microbes like segmented filamentous bacteria (SFB) play a key role in gut maturation during early life, as demonstrated in humans and mice. Our previous study demonstrated oral inoculation of ileum-spores containing SFB to chickens after hatch increases early SFB gut colonization, which increases immune maturation and resistance to bacteria, like Salmonella, as tested in vitro; however, more studies are needed for treatment optimization and in vivo testing.

      • Bacterial pathogens
      • Salmonella
  5. Elucidation of the Bovine Intramammary Bacteriome and Resistome from healthy cows of Swiss dairy farms in the Canton Tessin

    • Frontiers in Microbiology
    • Healthy, untreated cows of nine dairy herds from the Swiss Canton Tessin were analyzed three times within one year to identify the most abundant species of the intramammary bacteriome. Aseptically collected milk samples were cultured and bacteria identified using MALDI-TOF. Of 256 cows analyzed, 96% were bacteriologically positive and 80% of the 1,024 quarters were positive for at least one bacterial species.

      • Bacterial pathogens
      • Staphylococcus aureus
  6. Intestinal colonization with Campylobacter jejuni affects broiler gut microbiota composition but is not inhibited by daily intake of Lactiplantibacillus plantarum

    • Frontiers in Microbiology
    • Introduction

      Lactobacilli may prevent broilers from colonization with Campylobacter spp. and other gram-negative zoonotic bacteria through lactic acid production and modulation of the intestinal microbiota. This study evaluated the effects of daily intake of Lactiplantibacillus plantarum 256 (LP256) on Campylobacter jejuni (C. jejuni) loads in ceca and feces of C. jejuni challenged broilers, together with the changes in the gut microbiota.

      Methods

      • Bacterial pathogens
      • Campylobacter
  7. The difference in the composition of gut microbiota is greater among bats of different phylogenies than among those with different dietary habits

    • Frontiers in Microbiology
    • Bats have a very long evolutionary history and are highly differentiated in their physiological functions. Results of recent studies suggest effects of some host factors (e.g., phylogeny and dietary habit) on their gut microbiota. In this study, we examined the gut microbial compositions of 18 different species of bats. Results showed that Firmicutes, Gammaproteobacteria, and Actinobacteria were dominant in all fecal samples of bats.

      • Bacterial pathogens
      • Vibrio
  8. Pb(II)-inducible proviolacein biosynthesis enables a dual-color biosensor toward environmental lead

    • Frontiers in Microbiology
    • With the rapid development of synthetic biology, various whole-cell biosensors have been designed as valuable biological devices for the selective and sensitive detection of toxic heavy metals in environmental water. However, most proposed biosensors are based on fluorescent and bioluminescent signals invisible to the naked eye. The development of visible pigment-based biosensors can address this issue. The pbr operon from Klebsiella pneumoniae is selectively induced by bioavailable Pb(II).

      • Chemical contaminants
      • Heavy Metals
  9. Identification of the gut microbiota affecting Salmonella pullorum and their relationship with reproductive performance in hens

    • Frontiers in Microbiology
    • Introduction Pullorum disease is one of the common bacterial infectious diseases caused by Salmonella pullorum (S. pullorum), which can result in a decrease in the reproductive performance of laying hens, thus causing considerable economic losses. However, studies about the characteristics of intestinal microbiota with pullorum and their potential association with reproductive performance in hens are still limited. This study was to identify the gut microbiota associated with S.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  10. Effects of lactic acid bacteria isolated from Tibetan chickens on the growth performance and gut microbiota of broiler

    • Frontiers in Microbiology
    • Lactic acid bacteria (LAB) are organic supplements that have several advantages for the health of the host. Tibetan chickens are an ancient breed, which evolve unique gut microbiota due to their adaptation to the hypoxic environment of high altitude. However, knowledge of LAB isolated from Tibetan chickens is very limited.

      • Bacterial pathogens
      • Vibrio
  11. Development and evaluation of a new luciferase immunosorbent assay to detect GII.6 norovirus-specific IgG in different domestic and wild animals

    • Frontiers in Microbiology
    • Noroviruses (NoVs) are the leading viral pathogens globally causing acute gastroenteritis (AGE) in humans, posing a significant global health threat and economic burden. Recent investigations revealed that human NoVs had been detected in different animals, which raises concerns about whether NoVs are potential zoonotic diseases. This study developed a novel luciferase immunosorbent assay (LISA) to detect GII.6 NoV IgG based on P protein of VP1.

      • Viruses
      • Norovirus
  12. Genus-Wide Genomic Characterization of Macrococcus: Insights into Evolution, Population Structure, and Functional Potential

    • Frontiers in Microbiology
    • Macrococcus species have been isolated from a range of mammals and mammal-derived food products. While they are largely considered to be animal commensals, Macrococcus spp. can be opportunistic pathogens in both veterinary and human clinical settings. This study aimed to provide insight into the evolution, population structure, and functional potential of the Macrococcus genus, with an emphasis on antimicrobial resistance (AMR) and virulence potential.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Sampling locations and processing methods shape fungi microbiome on the surface of edible and medicinal Arecae semen

    • Frontiers in Microbiology
    • Introduction Arecae semen, which is derived from the dried ripe seed of Areca catechu L., has been commonly used as one of the major traditional Chinese medicines (TCMs). Three types of crude herbal preparations, namely, raw Arecae semen (AS), Arecae semen tostum (SAS), and Arecae semen carbonisata (FAS), are available for different clinical applications in TCMs.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  14. Antibacterial and anti-biofilm activities of probiotic Lactobacillus plantarum against Listeria monocytogenes isolated from milk, chicken and pregnant women

    • Frontiers in Microbiology
    • Listeria monocytogenes (L. monocytogenes) is a foodborne pathogen that poses significant risks to public health and food safety. The present study aimed to identify the presence of Listeria spp. in various samples, including pasteurized milk, chicken fillets, and stool samples from pregnant women in Sharkia Governorate, Egypt. Additionally, the study identified the serotypes, virulence-associated genes, antimicrobial resistance patterns, and biofilm formation in L. monocytogenes isolates.

      • Bacterial pathogens
      • Listeria monocytogenes
  15. Farm management practices and season dependent factors affect the microbial community and chemical profile of corn and grass-legume silages of farms in Ontario, Québec, and Northern New York

    • Frontiers in Microbiology
    • The effects of farm management practices and seasonal variation on the microbial community and chemical composition of corn and grass-legume silage are largely understudied due to the advantages of controlled mini-silo experiments. This study aims to investigate the effects that some key farm factors (use of an inoculant, farm region, and bunker or tower silo) and seasonal variations have on corn and grass-legume silage from farms across Ontario, Quebec, and New York.

      • Produce Safety
      • Seasonal Produce
  16. Comparison of genetic variations between high- and low-risk Listeria monocytogenes isolates using whole-genome de novo sequencing

    • Frontiers in Microbiology
    • In this study, genetic variations and characteristics of Listeria monocytogenes isolates from enoki mushrooms (23), smoked ducks (7), and processed ground meat products (30) were examined with respect to hemolysis, virulence genes, growth patterns, and heat resistance.

      • Bacterial pathogens
      • Listeria monocytogenes
  17. Improvement of growth, yield and associated bacteriome of rice by the application of probiotic Paraburkholderia and Delftia

    • Frontiers in Microbiology
    • Plant probiotic bacteria enhance growth and yield of crop plants when applied at the appropriate time and dose. Two rice probiotic bacteria, Paraburkholderia fungorum strain BRRh-4 and Delftia sp. strain BTL-M2 promote growth and yield of plants. However, no information is available on application of these two bacteria on growth, yield, and diversity and population of bacteriome in roots and rhizosphere soils of the treated rice plants.

      • Bacterial pathogens
      • Vibrio
  18. Novel next generation sequencing panel method for the multiple detection and identification of foodborne pathogens in agricultural wastewater

    • Frontiers in Microbiology
    • Detecting and identifying the origins of foodborne pathogen outbreaks is a challenging. The Next-Generation Sequencing (NGS) panel method offers a potential solution by enabling efficient screening and identification of various bacteria in one reaction.

      • Bacterial pathogens
      • Bacillus cereus
      • Staphylococcus aureus
      • Vibrio
      • Yersinia
  19. Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices

    • Frontiers in Microbiology
    • Introduction Shiga toxin-producing Escherichia coli (STEC) is a gastrointestinal pathogen causing foodborne outbreaks. Whole Genome Sequencing (WGS) in STEC surveillance holds promise in outbreak prevention and confinement, in broadening STEC epidemiology and in contributing to risk assessment and source attribution.

      • Bacterial pathogens
      • Escherichia coli O157:H7
  20. Influence of temperature and pH on induction of Shiga toxin Stx1a in Escherichia coli

    • Frontiers in Microbiology
    • Shiga toxin-producing strains represent pathogenic group that is of concern in food production. The present study evaluated forty-eight E. coli isolates (11 with intact stx gene, while remaining isolates presented only stx-fragments) for Shiga toxin production. The four most expressive stx-producers (O26, O103, O145, and O157) were selected to evaluate effects of pH (3.5, 4.5, and 7) and temperature (35, 40, and 50°C).

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  21. Campylobacter fetus foodborne illness outbreak in the elderly

    • Frontiers in Microbiology
    • In June 2021, a cluster of seven cases of Campylobacter fetus infections occurred in a rehabilitation center and caused significant morbidity in elderly patients including five with bacteremia and two with osteoarticular medical device infections. The genetic identity identified by whole genome sequencing of the different Campylobacter fetus strains confirms a common source.

      • Bacterial pathogens
      • Campylobacter
  22. Clinical features and treatment outcomes of Vibrio vulnificus infection in the coastal city of Ningbo, China

    • Frontiers in Microbiology
    • Background

      Vibrio vulnificus is a gram-negative, opportunistic pathogen common to warm waters worldwide. Human V. vulnificus infection is rare and typically affects those residing in coastal areas during the summer months, but it causes rapid deterioration and is fatal.

      Methods

      • Bacterial pathogens
      • Vibrio
  23. Induction role of chitosan nanoparticles to Anethum graveolens extract against food-borne bacteria, oxidant, and diabetic activities in vitro

    • Frontiers in Microbiology
    • Foodborne diseases as well as Foodborne pathogens are a global issue with significant effects on human health and economy. Therefore, several investigators have tried to find new alternative approaches to prevent and control this problem.

      • Bacterial pathogens
      • Staphylococcus aureus
  24. Disease burden contributed by dietary exposure to aflatoxins in a mountainous city in Southwest China

    • Frontiers in Microbiology
    • Introduction

      Aflatoxins (AFT) identified as a Group 1 human carcinogen naturally contaminate various types of food and could increase the risk of hepatocellular carcinoma (HCC) through dietary intake. Chongqing municipality is located in Southwest China with subtropical monsoon climate which is conducive to AFT contamination in crops. However, the burden of HCC caused by the dietary exposure of the population in Chongqing to AFT has not been quantified.

      Methods

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  25. Comparative genomic analysis of Campylobacter hepaticus genomes associated with spotty liver disease, Georgia, United States

    • Frontiers in Microbiology
    • Campylobacter hepaticus has re-emerged as an important cause of disease in egg laying birds worldwide, resulting in morbidity, mortality, and significant losses in eggs for the breeding and table egg laying industries. Although birds may appear asymptomatic, the disease is characterized by spots on the liver of birds and histopathological analysis reveals multifocal fibrogranulocytic necrotizing hepatitis microscopically. The re-emergence of C.

      • Bacterial pathogens
      • Campylobacter
      • Viruses
      • Hepatitis