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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 126 - 150 of 1286

  1. Characterization and optimization of bacteriophage cocktails to control Clostridium perfringens in vitro and in curry roux

    • International Journal of Food Microbiology
    • Clostridium perfringens is a major cause of foodborne disease in developed countries. The aim of this study was to isolate and characterize phages specific to C.

      • Bacterial pathogens
      • Clostridium perfringens
  2. Crystal digital RT-PCR for the detection and quantification of norovirus and hepatitis A virus RNA in frozen raspberries

    • International Journal of Food Microbiology
    • Berries are important vehicles for norovirus (NoV) and hepatitis A virus (HAV) foodborne outbreaks. Sensitive and quantitative detection of these viruses in food samples currently relies on RT-qPCR, but remains challenging due to their low concentration and the presence of RT-qPCR inhibitors. Moreover, quantification requires a standard curve.

      • Viruses
      • Hepatitis
      • Norovirus
  3. The effect of off-bottom versus on-bottom oyster culture on total and pathogenic Vibrio spp. abundances in oyster tissue, water and sediment samples

    • International Journal of Food Microbiology
    • Varying culture methods are commonly used for eastern oysterCrassostrea virginica, aquaculture in the Northeast United States. Vibrio vulnificus and V.

      • Bacterial pathogens
      • Vibrio
  4. Antibacterial mechanisms of clove essential oil against Staphylococcus aureus and its application in pork

    • International Journal of Food Microbiology
    • Clove essential oil (CEO) has been widely used in the processing of meat products due to its potent antibacterial activity and special aroma. However, studies on the antibacterial mechanism of CEO are still not detailed enough. The aims of this study were to investigate the antibacterial mechanisms of action of CEO against Staphylococcus aureus in detail and evaluate its efficacy in pork preservation.

      • Bacterial pathogens
      • Staphylococcus aureus
  5. Characterization and epidemiological analysis of Vibrio parahaemolyticus isolated from different marine products in East China

    • International Journal of Food Microbiology
    • Vibrio parahaemolyticus is a major foodborne pathogen with a wide distribution in the world that causes economic and public health problems. Here, we isolated 152 V. parahaemolyticus strains from shellfish, shrimp, crab, and snails from 5 provinces in East China, and analyzed the genetic diversity, population structure, and virulence profiles of these isolates. Our results showed that the 152 V.

      • Bacterial pathogens
      • Vibrio
  6. A quantitative risk assessment of Listeria monocytogenes from prevalence and concentration data: Application to a traditional ready to eat (RTE) meat product

    • International Journal of Food Microbiology
    • Ready to Eat (RTE) cooked meat products are among the most consumed RTE food subcategories in the EU/EEA. They are also associated with the highest number of identified listeriosis cases per year (>850), thus posing a public health risk especially among the susceptible population.

      • Bacterial pathogens
      • Listeria monocytogenes
  7. Proteomic evaluation of the effect of antifungal agents on aspergillus westerdijkiae ochratoxin A production in a dry-cured fermented sausage-based medium

    • International Journal of Food Microbiology
    • Aspergillus westerdijkiae may produce large amounts of ochratoxin A (OTA) in dry-cured meat products. Natural strategies to control ochratoxigenic moulds using biocontrol agents (BCAs) are currently in the spotlight. The aim of this study was to test the effects of Debaryomyces hansenii and its combination with rosemary derivatives and with a commercial antifungal preparation composed by natamycin and potassium sorbate (AP) against A.

      • Natural toxins
      • Mycotoxins
  8. Occurrence of selected bacterial pathogens in insect-based food products and in-depth characterisation of detected Bacillus cereus group isolates

    • International Journal of Food Microbiology
    • Insects are increasingly used as alternative protein sources and ingredients of foodstuffs produced in industrial scale.

      • Bacterial pathogens
      • Bacillus cereus
  9. Listeria monocytogenes post-outbreak management - When could a food production be considered under control again?

    • International Journal of Food Microbiology
    • In cases of outbreaks, food business operators face inspections, recall actions and delisting by retailers. This could have happened to an Austrian meat processor whose products have been associated with a cluster of seven cases of listeriosis spread over the years 2015–2017. Sequencing of clinical and foodborne isolates by public health specialists raised the suspect of a single source outbreak since all strains were of MLST 155, cgMLST 1234.

      • Bacterial pathogens
      • Listeria monocytogenes
  10. Genomic characterization of multidrug-resistant Salmonella Heidelberg E2 strain isolated from chicken carcass in southern Brazil

    • International Journal of Food Microbiology
    • Salmonella Heidelberg is a clinically-important serovar linked to food-borne illness, and commonly isolated from poultry products. Since 1962, Salmonella Heidelberg has been widely reported from poultry production systems in several countries, including Brazil. The emergence of multidrug-resistant (MDR) Salmonella Heidelberg strains in food animals underscores a significant food safety hazard.

      • Bacterial pathogens
      • Salmonella
  11. Vacuum packaging improved inactivation efficacy of moderate dry heat for decontamination of Salmonella on almond kernels

    • International Journal of Food Microbiology
    • The goal of this study was to develop dry heat processing conditions that could achieve a >5-log reduction of Salmonella with minimal negative impact on almond quality. The effects of almond's water activity levels and packaging methods on Salmonella inactivation by dry heat were determined. Almonds were dip-inoculated in a four-strain Salmonella cocktail and conditioned to water activity levels of 0.43, 0.33, 0.23, and 0.20.

      • Bacterial pathogens
      • Salmonella
  12. Survey of the occurrence of Giardia duodenalis cysts and Cryptosporidium spp. oocysts in green leafy vegetables marketed in the city of Valencia (Spain)

    • International Journal of Food Microbiology
    • The role of vegetables usually consumed without prior culinary treatment is known to contribute to the prevalence of foodborne diseases. Cysts and oocysts can contaminate food, which can then be the source of infection in humans. The aim of the study was to assess the occurrence of Giardia duodenalis and Cryptosporidium spp.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  13. Influence of abiotic factors (water activity and temperature) on growth and aflatoxin production by Aspergillus flavus in a chickpea-based medium

    • International Journal of Food Microbiology
    • The effect of water activity (aW; 0.87, 0.90, 0.92, 0.94, 0.96, 0.98 and 0.99), temperature (15, 25, and 30 °C), incubation time (5, 10, 14, and 21 days), and their interactions on mycelial growth and aflatoxin production in a chickpea-based medium by three Aspergillus flavus strains isolated from chickpea grains in Argentina was evaluated.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  14. Norovirus GI and GII and hepatitis a virus in berries and pomegranate arils in Canada

    • International Journal of Food Microbiology
    • Between 2016 and 2021, the Canadian Food Inspection Agency (CFIA) collected 4218 samples of fresh and frozen berries (blackberries, blueberries, raspberries, strawberries and mixed berries) and pomegranate arils at retail across 11 major cities in Canada and tested these samples for the presence of norovirus GI, norovirus GII and hepatitis A virus RNA.

      • Viruses
      • Hepatitis
      • Norovirus
  15. High prevalence of acute hepatitis E virus infection in pigs in Dutch slaughterhouses

    • International Journal of Food Microbiology
    • Hepatitis E is caused by hepatitis E virus (HEV), one of the causes of acute viral hepatitis. Domestic pigs are considered as the main reservoir of HEV-3. The recently reported high prevalence of HEV in liver- and meat products on the Dutch market warranted a cross-sectional prevalence study on HEV infection among 5–6 months old pigs slaughtered in the Netherlands (n = 250).

      • Viruses
      • Hepatitis
  16. First report from supermarket chicken meat and genomic characterization of colistin resistance mediated by mcr-1.1 in ESBL-producing, multidrug-resistant Salmonella Minnesota

    • International Journal of Food Microbiology
    • Plasmid-borne colistin resistance is considered one of the most complex public health concerns worldwide. Several studies reported the presence of the mcr-1.1 harboring Salmonella from the foodstuffs worldwide; still, there is a knowledge gap about the occurrence of these isolates in the Middle East. In this study, we report an mcr-1.1-mediated colistin resistance in two multidrug-resistant (MDR) S.

      • Bacterial pathogens
      • Salmonella
  17. Genomic analysis, antibiotic resistance, and virulence of Staphylococcus aureus from food and food outbreaks: A potential public concern

    • International Journal of Food Microbiology
    • Transmission and outbreaks of Staphylococcus aureus among retail food highlights the need to comprehensive analysis the molecular characteristic of Staphylococcus aureus in foods. However, the information about Staphylococcus aureus in north China is limited. In this study, 97 and 28 S.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Monascus spp. and citrinin: Identification, selection of Monascus spp. isolates, occurrence, detection and reduction of citrinin during the fermentation of red fermented rice

    • International Journal of Food Microbiology
    • Red fermented rice (RFR) is rice fermented using Monascus spp. This product contains monacolin K, providing health benefits including mitigation of diarrhoea and improving blood circulation. RFR can produce pigments that can act as natural colour and flavouring agents. However, Monascus spp. (a fungal starter to ferment RFR) can also produce the mycotoxin, citrinin (CIT) which is believed to have adverse effects on human health.

      • Natural toxins
      • Mycotoxins
  19. The temporal pattern and relationship of Campylobacter prevalence in broiler slaughter batches and human campylobacteriosis cases in Sweden 2009–2019

    • International Journal of Food Microbiology
    • Thermophilic Campylobacter species are the most common cause of bacterial gastroenteritis worldwide, and handling and consumption of broiler meat is considered a major foodborne transmission route. Both the incidence of campylobacteriosis and the prevalence of Campylobacter in broilers show seasonality but the impact of this association and broiler prevalence on human incidence is not clear.

      • Bacterial pathogens
      • Campylobacter
  20. Multidrug resistance and virulence genes carried by mobile genomic elements in Salmonella enterica isolated from live food animals, processed, and retail meat in North Carolina, 2018–2019

    • International Journal of Food Microbiology
    • An estimated 1000,000 domestic salmonellosis cases are attributed to food as a vehicle of exposure. Among Food Safety and Inspection Service (FSIS)-regulated products, approximately 360,000 salmonellosis cases are associated with consumption of meat, poultry, and egg products. Salmonella vaccination programs instituted in U.S.

      • Bacterial pathogens
      • Salmonella
  21. Co-crystallization of curcumin for improved photodynamic inactivation of Vibrio parahaemolyticus and its application for the preservation of cooked clams

    • International Journal of Food Microbiology
      • Bacterial pathogens
      • Vibrio
  22. New clues about the global MRSA ST398: Emergence of MRSA ST398 from pigs in Qinghai, China

    • International Journal of Food Microbiology
      • Bacterial pathogens
      • Staphylococcus aureus
  23. Assessing the effectiveness of performance standards for Salmonella contamination of chicken parts

    • International Journal of Food Microbiology
    • The United States Department of Agriculture's Food Safety and Inspection Service implemented Salmonella performance standards for establishments producing chicken parts in 2016. The standards were chosen based on the assumption that a 30 % reduction in the occurrence of Salmonella-contaminated chicken parts samples (i.e., legs, breasts or wings) would result following implementation of the performance standard program.

      • Bacterial pathogens
      • Salmonella
  24. Characterization of Escherichia coli O157:non-H7 isolated from retail food in China and first report of mcr-1/IncI2-carrying colistin-resistant E. coli O157:H26 and E. coli O157:H4

    • International Journal of Food Microbiology
    • Escherichia coli O157 belongs to a diverse serogroup including different H serotypes. E. coli O157: H7 is the most common serotype that can cause acute gastroenteritis, hemorrhagic colitis (HC), and hemolytic-uremic syndrome (HUS) in humans. In recent years, some E. coli O157:non-H7 strains have been reported to cause sporadic cases and outbreaks of diarrheal diseases. However, the phenotypic and genotypic characteristics of E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  25. Biofilm formation and genomic features of Listeria monocytogenes strains isolated from meat and dairy industries located in Piedmont (Italy)

    • International Journal of Food Microbiology
    • Listeria monocytogenes is considered major challenge for the food industry as it can persist for long periods in food processing plants by forming biofilms. The aims of this study were: i) to assess the biofilm producing ability of 57 Listeria monocytogenes isolates previously subjected to whole-genome sequencing (WGS); ii) to compare the levels of biofilm formation with the presence or absence of biofilm associated genes.

      • Bacterial pathogens
      • Listeria monocytogenes