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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 1760

  1. Staphylococcus aureus isolated from traditional artisanal raw milk cheese from southern Brazil: diversity, virulence, and antimicrobial resistance profile

    • Journal of Food Protection
    • Staphylococcus aureus is one of the primary pathogenic agents found in cheeses produced with raw milk. Some strains of S. aureus are enterotoxigenic, possessing the ability to produce toxins responsible for staphylococcal food poisoning when present in contaminated foods. This study aimed to genotypically characterize, assess the antimicrobial resistance profile, and examine the enterotoxigenic potential of strains of S.

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Comparison of three air sampling methods for the quantification of Salmonella, Shiga-toxigenic Escherichia coli (STEC), coliforms, and generic E. coli from bioaerosols of cattle and poultry farms

    • Journal of Food Protection
    • Recent fresh produce outbreaks potentially associated with bioaerosol contamination from animal operations in adjacent land highlighted the need for further study to better understand the associated risk. The purpose of this research was to evaluate three sampling methods for quantifying target bacterial bioaerosols from animal operations. A dairy cattle and poultry farm located in Georgia, U.S. were visited six times each.

      • Bacterial pathogens
      • Salmonella
  3. Inhibition of Listeria monocytogenes and Clostridium botulinum in Uncured Shredded Pork and Turkey Packaged under Reduced Oxygen Conditions

    • Journal of Food Protection
    • Cooked, uncured meat products packaged under reduced oxygen packaging conditions require the control of anaerobic and facultative anaerobic pathogens if they are held at temperatures greater than 3°C at retail or consumer level. The objective of this study was to determine the inhibition of Listeria monocytogenes and Clostridium botulinum in cooked, uncured shredded turkey and pork formulated with synthetic or clean label antimicrobials.

      • Bacterial pathogens
      • Clostridium botulinum
      • Listeria monocytogenes
  4. Evaluating the Safety of Sous-Vide Cooking for Beef Products Inoculated with Single Strains of Salmonella enterica and Escherichia coli O157

    • Journal of Food Protection
    • Sous-vide cooking is a growing trend among retailers and consumers. Foodborne pathogens may survive the cooking if non-validated parameters are used or if pathogens have enhanced thermal resistance. Pathogen inactivation from sous-vide cooking was determined when introduced directly to beef products or via contaminated spices, and with or without a finishing step.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  5. OCCURRENCE OF AFLATOXIN M1 AND ESTIMATE OF DIETARY EXPOSURE IN CHEESES FROM ORGANIC AND CONVENTIONAL PRODUCTION SYSTEMS

    • Journal of Food Protection
    • This study aimed to compare AFM1 occurrence in different cheese types produced by organic and conventional systems; and to evaluate the risk of food exposure to AFM1. A total of 176 commercial cheeses of 17 types were analyzed, 84 of organic and 92 of conventional production.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  6. Dynamics of Listeria monocytogenes and Salmonella enterica on Cooked Vegetables during Storage

    • Journal of Food Protection
    • Fresh vegetables have been linked to multiple foodborne outbreaks in the U.S., with Listeria monocytogenes and Salmonella enterica identified as leading causes. Beyond raw vegetables, cooked vegetables can also pose food safety concerns due to improper cooking temperature and time combinations or post-cooking contamination.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
  7. Detection and Distribution of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) in Campylobacter jejuni Isolates from Chicken Livers

    • Journal of Food Protection
    • Campylobacter jejuni is the leading foodborne bacterial pathogen that causes human gastroenteritis worldwide linked to consumption of undercooked broiler livers. Application of bacteriophages during poultry production has been used as an alternative approach to reduce contamination of poultry meat by Campylobacter. To make this approach effective, understanding the presence of the bacteriophage sequences in the CRISPR spacers in C.

      • Bacterial pathogens
      • Campylobacter
  8. Viable Campylobacter jejuni on eggshells and its potential to cross-contaminate egg white and yolk when using a manual separation technique, determined by culture and propidium monoazide (PMA) qPCR

    • Journal of Food Protection
    • Manual separation of egg yolk from egg white using the eggshell is common practice in private households. For this, the egg is cracked and both components are separated by passing the egg yolk back and forth between the two halves of the eggshell, allowing the egg white to drip down while the egg yolk remains in the shell.

      • Bacterial pathogens
      • Campylobacter
  9. Poultry Food Assess Risk Model for Salmonella and Chicken Gizzards: III. Dose Consumed Step

    • Journal of Food Protection
    • The Dose Consumed step of the Poultry Food Assess Risk Model (PFARM) for Salmonella and chicken gizzards was presented and compared to the Exposure Assessment step of Quantitative Microbial Risk Assessment (QMRA).

      • Bacterial pathogens
      • Salmonella
  10. Prevalence and Antimicrobial Resistance of Campylobacter in Conventional and No Antibiotics Ever Broiler Farms

    • Journal of Food Protection
    • Campylobacter is a leading cause of enteric disease worldwide. No antibiotics ever (NAE) poultry has become increasingly popular, yet little is known about the incidence and antimicrobial resistance (AMR) of Campylobacter in this production system. This study was conducted to determine the prevalence, concentration, and AMR of Campylobacter in conventional (CV) and NAE-raised broilers.

      • Bacterial pathogens
      • Campylobacter
  11. Genetic characteristics of Salmonella isolates recovered from reused broiler litter over three successive flocks

    • Journal of Food Protection
    • Salmonella infections are a leading cause of bacterial food-borne illness worldwide. Infections are highly associated with the consumption of contaminated food, and in particular, chicken meat. The severity of Salmonella infections depends on the presence of antimicrobial resistance genes and virulence factors.

      • Bacterial pathogens
      • Salmonella
  12. Effect of ground beef irradiation on annual nontyphoidal Salmonella and Escherichia coli O157 burden and direct healthcare costs in the United States: A simulation study

    • Journal of Food Protection
    • Over 20% of E. coli O157 illnesses and over 5% of Salmonella illnesses are estimated to be attributable to beef consumption in the United States. Irradiating ground beef is one possible method to reduce disease burden. We simulated the effect of ground beef irradiation on illnesses, hospitalizations, deaths, and direct healthcare costs from ground beef-associated E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  13. Survival of Listeria monocytogenes on Frozen Vegetables during Long-term Storage at -18 and -10°C

    • Journal of Food Protection
    • Two recent listeriosis outbreaks have occurred in the United States and Europe due to contaminated individually quick-frozen (IQF) vegetables. While one of the outbreaks was due to frozen vegetables considered ready-to-eat (RTE), the other was linked to frozen corn whose packaging contained cooking instructions and was considered not-ready-to-eat (NRTE). However, consumers may thaw certain frozen vegetables and consume without cooking.

      • Bacterial pathogens
      • Listeria monocytogenes
  14. Inactivation of Listeria monocytogenes and Salmonella spp. During Cooking of Country Ham and Fate of L. monocytogenes and Staphylococcus aureus During Storage of Country Ham Slices

    • Journal of Food Protection
    • Thermal inactivation studies were undertaken on Listeria monocytogenes and Salmonella spp. inoculated on the surface of country ham. Hams (average = ca. 3.4 ± 0.5 kg each; average = ca. ≥18% shrinkage) were used as provided by the processor (i.e., “salted hams”), desalted in tap water (i.e., “desalted hams”), or dried for an additional period (i.e., “extra dried hams”). Hams were surface inoculated (ca.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus
  15. Evaluation of Peracetic Acid Treatment on Beef Trimmings and Subprimals against Salmonella and E. coli O157:H7 within Regulatory Retained Water Limitations

    • Journal of Food Protection
    • The application of antimicrobial treatments to beef trimmings prior to grinding for the reduction of microbial contamination in ground beef has increased recently. However, raw single-ingredient meat products are not permitted by Food Safety and Inspection Services (FSIS) to retain more than 0.49% water resulting from post-evisceration processing. The effectiveness of antimicrobials with the limited water retention is not well documented.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  16. Unlocking the hidden threat: impacts of surface defects on the efficacy of sanitizers against Listeria monocytogenes biofilms on food-contact surfaces in tree fruit packing facilities

    • Journal of Food Protection
    • Food-contact surfaces showing signs of wear pose a substantial risk of Listeria monocytogenes contamination and may serve as persistent sources of cross-contamination in fresh produce packinghouses. This study offers a comprehensive exploration into the influence of surface defects on the efficacies of commonly used sanitizers against L.

      • Bacterial pathogens
      • Listeria monocytogenes
  17. Minimum Concentrations of Slow Pyrolysis Paper and Walnut Hull Cyclone Biochars Needed to Inactivate Escherichia coli O157:H7 in Soil

    • Journal of Food Protection
    • Antimicrobial properties of biochar have been attributed to its ability to inactivate foodborne pathogens in soil, to varying degrees. High concentrations of biochar have reduced E. coli O157:H7 in soil and dairy manure compost, based on alkaline pH. Preliminary studies evaluating 31 different biochars determined that two slow pyrolysis biochars (paper biochar and walnut hull cyclone biochar) were the most effective at inactivating E. coli in soil.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  18. Reduction of non-typhoidal Salmonella enterica in broth and on raw chicken breast by a broad-spectrum bacteriophage cocktail

    • Journal of Food Protection
    • Globally, nontyphoidal Salmonella (NTS) causes approximately 150 million foodborne illnesses annually; many of which are linked to poultry products.

      • Bacterial pathogens
      • Salmonella
  19. Poultry processing interventions reduce Salmonella serovar complexity on post-chill young chicken carcasses as determined by deep serotyping

    • Journal of Food Protection
    • Nearly 20% of salmonellosis cases are attributed to broilers, with renewed efforts to reduce Salmonella during broiler production and processing. A limitation to Salmonella culture is that often a single colony is picked for characterization, favoring isolation of the most abundant serovar found in a sample, while low abundance serovars can remain undetected.

      • Bacterial pathogens
      • Salmonella
  20. Radiofrequency inactivation of Salmonella in black pepper and dried basil leaves using in-package steaming

    • Journal of Food Protection
    • Radiofrequency (RF) heating has been extensively studied for pasteurizing low-moisture foods. Currently, bulk foods are treated with radiofrequency; potential cross-contamination may occur during packaging of pasteurized products. As an alternative, in-package RF processing was evaluated for Salmonella inactivation on black peppercorns and dried basil leaves and prevention of cross-contamination during storage postprocessing.

      • Bacterial pathogens
      • Salmonella
  21. Serotype distribution, antimicrobial resistance, virulence genes, and genetic diversity of Salmonella spp. isolated from the informal leafy green vegetable supply chains in South Africa

    • Journal of Food Protection
    • Salmonella have been implicated in foodborne disease outbreaks globally and is a pressing concern in the South African informal sector due to inadequate hygiene standards and limited regulatory oversight, leading to a higher risk of foodborne diseases.

      • Bacterial pathogens
      • Salmonella
  22. Inactivation of Listeria monocytogenes by hydrogen peroxide addition in commercial cheese brines

    • Journal of Food Protection
    • Commercial cheese brines are used repeatedly over extended periods, potentially for years, and can be a reservoir for salt-tolerant pathogens, such as Listeria monocytogenes. The objective of this study was to determine the inactivation of L. monocytogenes in cheese brines treated with hydrogen peroxide (H2O2) (0, 50, and 100 ppm) at holding temperatures representing manufacturing conditions.

      • Bacterial pathogens
      • Listeria monocytogenes
  23. Inactivation of Salmonella Enteritidis on hatchery and table eggs using a gas phase-hydroxyl radical process

    • Journal of Food Protection
    • Eggs represent a significant vehicle for Salmonella Enteritidis with the pathogen being transferred to chicks in the hatchery, or to consumers via table eggs. In the following, the efficacy of a gas phase hydroxyl-radical process for decontaminating hatchery and table eggs was evaluated. Recovery of Salmonella was maximized through holding eggs in tryptic soy broth containing 20% w/v glycerol for 1 h prior to plating.

      • Bacterial pathogens
      • Salmonella
  24. Determining how gavaging laying hens with lead (Pb) effects lead concentration in table eggs, bone, blood, and liver

    • Journal of Food Protection
    • Previous research has demonstrated that lead (Pb2+, for the remainder of the paper referred to as Pb) and other heavy metals are present in table eggs from backyard birds. While the source of Pb exposure is unknown, exposure to the environment via the foraging behavior of backyard poultry is likely a significant factor.

      • Chemical contaminants
      • Heavy Metals
  25. Campylobacter jejuni Outbreak Linked to Raw Oysters in Rhode Island, 2021

    • Journal of Food Protection
    • Oysters and other shellfish are not a food that is commonly highlighted as high risk for Campylobacter contamination. The Rhode Island Department of Health (RIDOH) conducted a multiagency investigation of a Campylobacter jejuni outbreak that was linked to the consumption of raw oysters; the first such outbreak detected in Rhode Island. The environmental investigation identified birds as the likely source of contamination of the aquacultured oysters.

      • Bacterial pathogens
      • Campylobacter