An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 151 - 175 of 317

  1. Microbiological survey of sugar gliders (Petaurus breviceps) kept as pets in Italy

    • Letters in Applied Microbiology
    • The sugar glider (Petaurus breviceps) is a small, arboreal, nocturnal, gliding mammalian possum belonging to the marsupial infraclass. Exotic marsupials, including sugar gliders, are becoming popular companion pets and, consequently, the risk of potential infections that can be transmitted to humans should be investigated. Data on the role of the sugar glider as a possible carrier of pathogenic and zoonotic bacteria are scarce and fragmentary.

      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Bacterial pathogens
      • Yersinia
  2. Analysis of bacterial diversity during fermentation of Chinese traditional fermented chopped pepper

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: Fermented chopped pepper is an important ingredient in traditional Chinese foods. As of yet, the bacterial community dynamics that take place during the fermentation of chopped pepper have not been described. In this study, we used high‐throughput sequencing to investigate the bacterial community, deepening our understanding of the microbial mechanisms underlying the fermentation of traditional chopped pepper.

  3. Prevalence of virulence and Extended‐Spectrum β‐Lactamase (ESBL) genes harboring Vibrio spp. isolated from cockles (Tegillarca granosa) marketed in Korea

    • Letters in Applied Microbiology
    • The present study aimed to investigate the incidence, virulence and antibiotic properties in Vibrio spp. isolated from cockles (Tegillarca granosa) marketed in Korea. A total of 32 Vibrio spp. isolates including V. parahaemolyticus (n=4), V. alginolyticus (n=11), V. diabolicus (n=14), and V. harveyi (n=3) were detected using gyrB sequencing.

      • Bacterial pathogens
      • Vibrio
  4. Diversity of antimicrobial resistant pathogens from a freshwater ornamental fish farm

    • Letters in Applied Microbiology
    • The indiscriminate use of antimicrobials in aquaculture results in antibiotic selection pressure and proliferation of antimicrobial resistant (AMR) bacteria. Frequent assessment of antimicrobial resistance in aquaculture environment is inevitable so as to reduce the passage of clinically important AMR from aquatic to other environment. The present study analysed the antimicrobial resistance of pathogens associated with diseased koi carp and goldfish from an ornamental fish farm.

      • Bacterial pathogens
  5. Manila clam (Ruditapes philippinarum) marketed in Korea as a source of vibrios harboring virulence and β‐lactam resistance genes

    • Letters in Applied Microbiology
    • The present study assessed the occurrence, virulence determinants and antimicrobial susceptibility patterns of Vibrio spp. isolated from live Manila clam (Ruditapes philippinarum). A total of 31 Vibrio spp. including 27 V. diabolicus, 2 V. fluvialis, 1 V. alginolyticus, and 1 V. antiquarius were isolated and identified.

      • Bacterial pathogens
      • Vibrio
  6. Elimination of Klebsiella pneumoniae NDM from the air and selected surfaces in hospital using radiant catalytic ionization

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: Microbial contamination of air and surfaces in hospitals play an important role in healthcare‐associated infections. The aim was the assessment of Klebsiella pneumoniae elimination using radiant catalytic ionization (RCI). K. pneumoniae are aetiological agent of nosocomial infections, such as: pneumonia, infections of urinary tract, blood, e.t.c. The strains producing the New Delhi metallo‐β‐lactamases are one of the greatest epidemiological threat.

      • Bacterial pathogens
  7. An outbreak of multiple genotypes of Listeria monocytogenes in New Zealand linked to contaminated ready‐to‐eat meats – a retrospective analysis using whole genome sequencing

    • Letters in Applied Microbiology
    • Four cases of listeriosis in a hospital (A) in New Zealand were identified in 2012. Pulsed‐field gel electrophoresis used at the time identified four pulsotypes amongst the clinical isolates. Two of the pulsotypes matched to L. monocytogenes isolates obtained from ready‐to‐eat (RTE) meat samples from a RTE producer tested during a nationwide microbiological survey the month prior.

      • Bacterial pathogens
      • Listeria monocytogenes
  8. Recovery of thermophilic Campylobacter by three sampling methods from river sites in Northeast Georgia, USA, and their antimicrobial resistance genes

    • Letters in Applied Microbiology
    • Sixteen sites in the watershed of the South Fork of the Broad River (SFBR) in Northeastern Georgia, USA, were sampled in two seasons to detect Campylobacter. Sites were classified as mostly influenced by forest, pasture, wastewater pollution control plants (WPC) or mixed‐use. Sampling was repeated in the late spring and late fall for two years for a total of 126 samples.

      • Campylobacter
      • Bacterial pathogens
  9. Extended spectrum beta‐lactamase producing Shiga‐toxin producing ‐ Escherichia coli in Piglets, Humans and Water sources in North East region of India

    • Letters in Applied Microbiology
    • ESBL producing STEC are posing a constant threat to public health throughout the world leading to serious infections and raising key therapeutic issues. A total of 219 fecal samples were collected from piglets with diarrheoa, pig farmers, and water sources in North East India; and were processed for isolation of Escherichia coli. The isolates were screened for antimicrobial resistance and suspected isolates for ESBLs production by double disk synergy test (DDST). E.

      • Bacterial pathogens
      • Bacterial pathogens
  10. Tungsten carbide nanoparticles show a broad spectrum virucidal activity against enveloped and nonenveloped model viruses using a guideline‐standardized in vitro test

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: The present study investigates the virucidal activity of tungsten carbide nanoparticles using the quantitative suspension test in accordance with the European norm EN 14476+A1 and the German DVV/RKI guidelines. Due to highly standardized assay conditions, results of this test are considered very reliable for evaluation of the virucidal activity of disinfectants.

      • Norovirus
      • Viruses
  11. Development of a loop‐mediated isothermal amplification assay targeting lmo0753 gene for detection of Listeria monocytogenes in wastewater

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: Treated wastewater effluent contains Listeria monocytogenes which survives conventional wastewater treatment processes and can re‐enter human food chain, thus it is imperative to detect L.  monocytogenes using a rapid and an inexpensive method.

      • Bacterial pathogens
      • Listeria monocytogenes
  12. Modelling the survival of Listeria monocytogenes strains in soft lactic cheese following acid and salt stress exposures

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: The ability to predict the growth and survival of Listeria monocytogenes in contaminated RTE foods is essential for listeriosis risk assessment. The results of this study provided valuable information on the kinetic parameters of survival of some L. monocytogenes strains found within the South African food environment.

      • Listeria monocytogenes
      • Bacterial pathogens
      • Bacterial pathogens
      • Listeria monocytogenes
      • Listeria monocytogenes
      • Bacterial pathogens
  13. Extended‐spectrum beta‐lactamase‐producing Escherichia coli harboring sul and mcr‐1 genes isolates from fish gut contents in the Mekong delta, Vietnam

    • Letters in Applied Microbiology
    • This study investigated the existence of sulfonamides and colistin resistance genes among extended‐spectrum beta‐lactamase (ESBL)‐producing E. coli recovered from fish gut in Vietnam and evaluated the susceptibility patterns of the ESBL‐producing E. coli to relevant antimicrobials. A total of 88 ESBL‐producing E. coli isolates were analyzed for the presence of the ESBLs, sul (1,2,3) and mcr (1‐3) genes by PCR. Antimicrobial resistance phenotypes of isolates were determined by disc diffusion.

      • Bacterial pathogens
      • Bacterial pathogens
  14. Nanoporous anodic alumina reduces Staphylococcus biofilm formation

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: This paper reports on a simple, robust and scientifically sound method to reduce attachment and biofilm formation by Staphylococcus aureus and Staphylococcus epidermidis to abiotic surfaces using a carefully designed nanoscale topography. This approach can help to reduce the incidence of staphylococcal biofilms and infections without imposing selective stresses on bacteria, thus preventing the creation of resistant strains.

      • Staphylococcus aureus
      • Staphylococcus aureus
      • Bacterial pathogens
      • Bacterial pathogens
  15. Preparation and immunological characterization of an inactivated canine Clostridium perfringens type A vaccine

    • Letters in Applied Microbiology
    • Clostridium perfringens is the main cause of sudden death in dogs and currently there is no vaccine to prevent it. In this study, a canine C. perfringens type A strain was used to prepare a vaccine. C. perfringens was inactivated by formaldehyde and adjuvants were added. The safety and immunological characteristics of the inactivated C. perfringens vaccine were evaluated in mice and dogs. The results showed that the C. perfringens vaccine was safe and had immunoprotective activity.

      • Clostridium perfringens
      • Clostridium perfringens
      • Bacterial pathogens
      • Bacterial pathogens
  16. Comparison of media and growth conditions for culturing enterohepatic Helicobacter species

    • Letters in Applied Microbiology
    • Significance and Impact of the Study: Enterohepatic Helicobacter (EHH) infections have been associated with several diseases in humans such as acute gastroenteritis, inflammatory bowel disease and hepatobiliary diseases. Although they are frequently detected in clinical samples by molecular methods, only occasionally they are isolated using culture conditions described for the taxonomic related pathogen Campylobacter sp.

      • Campylobacter
      • Campylobacter
      • Bacterial pathogens
  17. Tungsten carbide nanoparticles show a broad spectrum virucidal activity against enveloped and non‐enveloped model viruses using a guideline‐standardized in vitro test

    • Letters in Applied Microbiology
    • Abstract

      • Norovirus
      • Norovirus
      • Viruses
      • Viruses
  18. Effectiveness of daily rinsing of alfalfa sprouts with aqueous chlorine dioxide and ozonated water on the growth of Listeria monocytogenes during sprouting

    • Letters in Applied Microbiology
    • Abstract

      • Listeria monocytogenes
      • Bacterial pathogens
      • Listeria monocytogenes
      • Bacterial pathogens
      • Bacterial pathogens
      • Listeria monocytogenes
  19. Prevalence, molecular characterization, genetic heterogeneity and antimicrobial resistance of Listeria monocytogenes associated with fish and fishery environment in Kerala, India

    • Letters in Applied Microbiology
    • Abstract

      • Listeria monocytogenes
      • Bacterial pathogens
      • Listeria monocytogenes
      • Bacterial pathogens
      • Listeria monocytogenes
      • Bacterial pathogens
  20. Detection of norovirus in food samples collected during suspected food‐handler‐involved foodborne outbreaks in Tokyo

    • Letters in Applied Microbiology
    • Abstract

  21. The hydraulic retention time influences the abundance of Enterobacter, Clostridium and Lactobacillus during the hydrogen production from food waste

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology The hydraulic retention time influences the abundance of Enterobacter, Clostridium and Lactobacillus during the hydrogen production from food waste

  22. Restraining the multidrug efflux transporter STY4874 of Salmonella Typhi by reserpine and plant extracts

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology Restraining the multidrug efflux transporter STY4874 of Salmonella Typhi by reserpine and plant extracts

      • Salmonella
      • Bacterial pathogens
  23. Development of a Loop‐Mediated Isothermal Amplification (LAMP) assay targeting lmo0753 gene for detection of Listeria monocytogenes in wastewater

    • Letters in Applied Microbiology
    • Abstract

      • Listeria monocytogenes
      • Bacterial pathogens
  24. Detection of norovirus in food samples collected during suspected food handler‐involved foodborne outbreaks in Tokyo

    • Letters in Applied Microbiology
    • Abstract

      • Norovirus
      • Viruses
  25. The hydraulic retention time influences the abundance of Enterobacter, Clostridium, and Lactobacillus during the hydrogen production from food waste

    • Letters in Applied Microbiology
    • Abstract

      • Bacterial pathogens