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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 51 - 75 of 187

  1. Structure and function of Listeria teichoic acids and their implications

    • Molecular Microbiology
    • Teichoic acids are a diverse class of molecules on the surface of Gram‐positive bacteria known to play important roles in fitness, virulence and bacteriophage susceptibility. A significant level of structural and constitutional heterogeneity exists within the Listeria genus, and it is this variation which serves as a basis for serotyping. Here, we elaborate on recent findings in the Listeria teichoic acid field, and discuss potential diagnostic and therapeutic strategies.

      • Bacterial pathogens
  2. Genome‐wide Identification of Listeria monocytogenes CodY‐Binding Sites

    • Molecular Microbiology
    • The CodY protein is a global transcriptional regulator of metabolic and virulence genes in low G + C Gram‐positive bacteria, including pathogenic Listeria monocytogenes. Hundreds of CodY‐binding sites were found in the L. monocytogenes genome at near single‐nucleotide resolution, most of them within genes’ coding sequences. In many cases, CodY appears to bind to two overlapping 15‐nt motifs.

      • Listeria monocytogenes
      • Bacterial pathogens
  3. High‐throughput transposon sequencing highlights the cell wall as an important barrier for osmotic stress in methicillin resistant Staphylococcus aureus and underlines a tailored response to different osmotic stressors

    • Molecular Microbiology
    • Staphylococcus aureus is able to grow in the presence of high concentrations of NaCl but the exact genetic factors contributing to this are unknown. Using a high‐throughput TN‐seq approach, we identified gene 957 as an important factor for the salt stress resistance in S. aureus. A 957‐mutant was not only salt sensitive but also showed increased peptidoglycan crosslinking, altogether highlighting the cell wall as an important barrier against osmotic stress.

      • Staphylococcus aureus
      • Bacterial pathogens
  4. An in vitro DNA Phosphorothioate Modification Reaction

    • Molecular Microbiology
    • DNA phosphorothioation is widely used in antisense drugs. DNA PT modification also exists in bacteria. Using a purified enzyme complex, we show here for the first time how the inert DNA backbone is activated for the exchanging of oxygen with sulfur. Abstract Phosphorothioation (PT) involves the replacement of a nonbridging phosphate oxygen on the DNA backbone with sulfur. In bacteria, the procedure is both sequence‐ and stereo‐specific.

      • Salmonella
      • Bacterial pathogens
  5. Specificity of cobamide remodeling, uptake, and utilization in Vibrio cholerae

    • Molecular Microbiology
    • Cobamides are a family of cofactors that are widely‐utilized by diverse organisms, and there are over a dozen variants, including vitamin B12. V. cholerae imports a range of cobamides, but it cannot utilize a variant called pseudocobalamin and instead remodels it through a distinct pathway. Abstract Cobamides are a group of compounds including vitamin B12 that can vary at the lower base position of the nucleotide loop.

      • Salmonella
      • Bacterial pathogens
      • Vibrio
  6. Identification of the lipopolysaccharide O‐antigen biosynthesis priming enzyme and the O‐antigen ligase in Myxococcus xanthus: critical role of LPS O‐antigen in motility and development

    • Molecular Microbiology
    • Myxococcus xanthus displays several social behaviors involving cell–cell contacts. To understand the role of the lipopolysaccharide (LPS) in these behaviors, we identified key enzymes involved in O‐antigen and LPS biosynthesis: the polyisoprenyl‐phosphate hexose‐1‐phosphate transferase, responsible for priming O‐antigen synthesis and the O‐antigen ligase.

      • Bacterial pathogens
      • Salmonella
      • Bacterial pathogens
  7. Lytic transglycosylases RlpA and MltC assist in Vibrio cholerae daughter cell separation

    • Molecular Microbiology
    • Vibrio cholerae mutants lacking lytic transglycosylases MltC and RlpA are defective for daughter cell separation. Our results suggest that lytic transglycosylases at the division septum serve as a back‐up mechanism to cleave peptidoglycan strands that cannot be cleared by highly‐regulated amidase activity, and to clear peptidoglycan debris that may block the completion of outer‐membrane invagination.

      • Vibrio
      • Vibrio
      • Bacterial pathogens
      • Bacterial pathogens
  8. A role for the Salmonella Type III Secretion System 1 in bacterial adaptation to the cytosol of epithelial cells

    • Molecular Microbiology
    • The bacterial pathogen Salmonella Typhimurium invades intestinal epithelial cells. Following invasion, the bacteria can either replicate within a membrane bound vacuole or escape into the cytosol. We show here that SipA, a secreted bacterial protein, facilitates the early survival and/or initiation of replication of cytosolic Salmonella. Summary Salmonella enterica serovar Typhimurium is a facultative intracellular pathogen that invades the intestinal epithelium.

      • Salmonella
      • Bacterial pathogens
      • Salmonella
      • Bacterial pathogens
  9. Structural and functional characterization of SiiA, an auxiliary protein from the SPI4‐encoded type 1 secretion system from Salmonella enterica

    • Molecular Microbiology
    • SiiA is required for the function of the Salmonella SPI4‐encoded T1SS. Using structural and functional studies, we show that the periplasmic domain of SiiA displays a peptidoglycan (PG)‐binding OmpA‐like fold and that SiiA binds PG in vitro and in vivo, albeit at an acidic pH, only. SiiA in complex with SiiB translocates protons across the inner membrane; however, further studies are needed to understand how SiiA uses the proton motif force to support the T1SS.

      • Salmonella
      • Bacterial pathogens
  10. Structural and functional characterisation of SiiA, an auxiliary protein from the SPI4‐encoded type 1 secretion system from Salmonella enterica

    • Molecular Microbiology
    • Molecular Microbiology Structural and functional characterisation of SiiA, an auxiliary protein from the SPI4‐encoded type 1 secretion system from Salmonella enterica

      • Salmonella
      • Bacterial pathogens
  11. Metal‐responsive RNA polymerase extracytoplasmic function (ECF) sigma factors

    • Molecular Microbiology
    • Molecular Microbiology Metal‐responsive RNA polymerase extracytoplasmic function (ECF) sigma factors

      • Heavy Metals
      • Chemical contaminants
  12. Shining light on the Alphaproteobacterial general stress response

    • Molecular Microbiology
    • Abstract

      • Bacterial pathogens
  13. The signaling peptide NprX controlling sporulation and necrotrophism is imported into Bacillus thuringiensis by two oligopeptide permease systems

    • Molecular Microbiology
    • Molecular Microbiology The signaling peptide NprX controlling sporulation and necrotrophism is imported into Bacillus thuringiensis by two oligopeptide permease systems

      • Bacillus cereus
  14. The Campylobacter jejuni helical to coccoid transition involves changes to peptidoglycan and the ability to elicit an immune response

    • Molecular Microbiology
    • Molecular Microbiology The Campylobacter jejuni helical to coccoid transition involves changes to peptidoglycan and the ability to elicit an immune response

      • Bacterial pathogens
      • Campylobacter
  15. Polar landmark protein HubP recruits flagella assembly protein FapA under glucose limitation in Vibrio vulnificus

    • Molecular Microbiology
    • Molecular Microbiology Polar landmark protein HubP recruits flagella assembly protein FapA under glucose limitation in Vibrio vulnificus

      • Vibrio
      • Bacterial pathogens
  16. Alternariol as virulence and colonization factor of Alternaria alternata during plant infection

    • Molecular Microbiology
    • Molecular Microbiology Alternariol as virulence and colonization factor of Alternaria alternata during plant infection

  17. Cell‐cell communication, chemotaxis, and recruitment in Vibrio parahaemolyticus

    • Molecular Microbiology
    • Molecular Microbiology Cell‐cell communication, chemotaxis, and recruitment in Vibrio parahaemolyticus

      • Vibrio
      • Bacterial pathogens
  18. Stringent response leads to continued cell division and a temporal re‐start of DNA replication after initial shutdown in Vibrio cholerae

    • Molecular Microbiology
    • Molecular Microbiology Stringent response leads to continued cell division and a temporal re‐start of DNA replication after initial shutdown in Vibrio cholerae

      • Vibrio
      • Bacterial pathogens
  19. Aurantimycin resistance genes contribute to survival of Listeria monocytogenes during life in the environment

    • Molecular Microbiology
    • Molecular Microbiology Aurantimycin resistance genes contribute to survival of Listeria monocytogenes during life in the environment

      • Listeria monocytogenes
      • Bacterial pathogens
  20. Synthetic developmental regulator MciZ targets FtsZ across Bacillus species and inhibits bacterial division

    • Molecular Microbiology
    • Molecular Microbiology Synthetic developmental regulator MciZ targets FtsZ across Bacillus species and inhibits bacterial division

  21. Maintenance of the virulence plasmid in Shigella flexneri is influenced by Lon and two functional partitioning systems

    • Molecular Microbiology
    • Molecular Microbiology Maintenance of the virulence plasmid in Shigella flexneri is influenced by Lon and two functional partitioning systems

  22. Insights into the autotransport process of a trimeric autotransporter, Yersinia Adhesin A (YadA)

    • Molecular Microbiology
    • Molecular Microbiology Insights into the autotransport process of a trimeric autotransporter, Yersinia Adhesin A (YadA)

  23. Characterization of the Citrobacter rodentium Cpx regulon and its role in host infection

    • Molecular Microbiology
    • Molecular Microbiology Characterization of the Citrobacter rodentium Cpx regulon and its role in host infection

  24. The master quorum sensing regulators LuxR/HapR directly interact with the alpha subunit of RNA polymerase to drive transcription activation in Vibrio harveyi and Vibrio cholerae

    • Molecular Microbiology
    • Molecular Microbiology The master quorum sensing regulators LuxR/HapR directly interact with the alpha subunit of RNA polymerase to drive transcription activation in Vibrio harveyi and Vibrio cholerae

  25. Prophages in Salmonella enterica: a driving force in reshaping the genome and physiology of their bacterial host?

    • Molecular Microbiology
    • Molecular Microbiology Prophages in Salmonella enterica: a driving force in reshaping the genome and physiology of their bacterial host?