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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 51 - 75 of 383

  1. Disc and actin-associated Protein 1 influences attachment in the intestinal parasite Giardia lamblia

    • PLOS Pathogens
    • by Melissa C. Steele-Ogus, Ava M. Obenaus, Nathan J. Sniadecki, Alexander R. Paredez The deep-branching eukaryote Giardia lamblia is an extracellular parasite that attaches to the host intestine via a microtubule-based structure called the ventral disc. Control of attachment is mediated in part by the movement of two regions of the ventral disc that either permit or exclude the passage of fluid under the disc.

      • Parasites
      • Giardia lamblia
  2. Toxoplasma gondii phosphatidylserine flippase complex ATP2B-CDC50.4 critically participates in microneme exocytosis

    • PLOS Pathogens
    • by Hugo Bisio, Aarti Krishnan, Jean-Baptiste Marq, Dominique Soldati-Favre Regulated microneme secretion governs motility, host cell invasion and egress in the obligate intracellular apicomplexans. Intracellular calcium oscillations and phospholipid dynamics critically regulate microneme exocytosis. Despite its importance for the lytic cycle of these parasites, molecular mechanistic details about exocytosis are still missing.

      • Parasites
      • Toxoplasma gondii
  3. MurA escape mutations uncouple peptidoglycan biosynthesis from PrkA signaling

    • PLOS Pathogens
    • by Sabrina Wamp, Patricia Rothe, Daniel Stern, Gudrun Holland, Janina Döhling, Sven Halbedel Gram-positive bacteria are protected by a thick mesh of peptidoglycan (PG) completely engulfing their cells. This PG network is the main component of the bacterial cell wall, it provides rigidity and acts as foundation for the attachment of other surface molecules.

      • Bacterial pathogens
      • Listeria monocytogenes
  4. Acid stress signals are integrated into the σB-dependent general stress response pathway via the stressosome in the food-borne pathogen Listeria monocytogenes

    • PLOS Pathogens
    • by Duarte N. Guerreiro, M. Graciela Pucciarelli, Teresa Tiensuu, Diana Gudynaite, Aoife Boyd, Jörgen Johansson, Francisco García-del Portillo, Conor P. O’Byrne The general stress response (GSR) in Listeria monocytogenes plays a critical role in the survival of this pathogen in the host gastrointestinal tract. The GSR is regulated by the alternative sigma factor B (σB), whose role in protection against acid stress is well established.

      • Bacterial pathogens
      • Listeria monocytogenes
  5. The type 3 secretion effector IpgD promotes S. flexneri dissemination

    • PLOS Pathogens
    • by Volkan K. Köseoğlu, Marieke K. Jones, Hervé Agaisse The bacterial pathogen Shigella flexneri causes 270 million cases of bacillary dysentery worldwide every year, resulting in more than 200,000 deaths. S. flexneri pathogenic properties rely on its ability to invade epithelial cells and spread from cell to cell within the colonic epithelium.

      • Bacterial pathogens
      • Shigella
  6. Essential role of pyrophosphate homeostasis mediated by the pyrophosphate-dependent phosphofructokinase in Toxoplasma gondii

    • PLOS Pathogens
    • by Xuke Yang, Xiaoyan Yin, Jiaojiao Liu, Zhipeng Niu, Jichao Yang, Bang Shen Many biosynthetic pathways produce pyrophosphate (PPi) as a by-product, which is cytotoxic if accumulated at high levels. Pyrophosphatases play pivotal roles in PPi detoxification by converting PPi to inorganic phosphate.

      • Parasites
      • Cryptosporidium parvum
      • Toxoplasma gondii
  7. Guanosine inhibits hepatitis C virus replication and increases indel frequencies, associated with altered intracellular nucleotide pools

    • PLOS Pathogens
    • by Rosario Sabariegos, Ana María Ortega-Prieto, Luis Díaz-Martínez, Ana Grande-Pérez, Carlos García Crespo, Isabel Gallego, Ana I. de Ávila, Laura Albentosa-González, María Eugenia Soria, Pablo Gastaminza, Esteban Domingo, Celia Perales, Antonio Mas In the course of experiments aimed at deciphering the inhibition mechanism of mycophenolic acid and ribavirin in hepatitis C virus (HCV) infection, we observed an inhibitory effect of the nucleoside guanosine (Gua).

      • Viruses
      • Hepatitis
  8. Human NAIP/NLRC4 and NLRP3 inflammasomes detect Salmonella type III secretion system activities to restrict intracellular bacterial replication

    • PLOS Pathogens
    • by Nawar Naseer, Marisa S. Egan, Valeria M. Reyes Ruiz, William P. Scott, Emma N. Hunter, Tabitha Demissie, Isabella Rauch, Igor E. Brodsky, Sunny Shin Salmonella enterica serovar Typhimurium is a Gram-negative pathogen that uses two distinct type III secretion systems (T3SSs), termed Salmonella pathogenicity island (SPI)-1 and SPI-2, to deliver virulence factors into the host cell.

      • Bacterial pathogens
      • Salmonella
  9. Shoc2 recognizes bacterial flagellin and mediates antibacterial Erk/Stat signaling in an invertebrate

    • PLOS Pathogens
    • by Bao-Rui Zhao, Xin-Xin Wang, Xian-Wei Wang Flagellin is a key bacterial virulence factor that can stimulate molecular immune signaling in both animals and plants. The detailed mechanisms of recognizing flagellin and mounting an efficient immune response have been uncovered in vertebrates; however, whether invertebrates can discriminate flagellin remains largely unknown.

      • Bacterial pathogens
      • Vibrio
  10. Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies

    • PLOS Pathogens
    • by Kwok-ho Lam, Jacqueline M. Tremblay, Kay Perry, Konstantin Ichtchenko, Charles B. Shoemaker, Rongsheng Jin Botulinum neurotoxins (BoNTs) are among the deadliest of bacterial toxins. BoNT serotype A and B in particular pose the most serious threat to humans because of their high potency and persistence. To date, there is no effective treatment for late post-exposure therapy of botulism patients.

      • Bacterial pathogens
      • Clostridium botulinum
  11. Inhibition of the master regulator of Listeria monocytogenes virulence enables bacterial clearance from spacious replication vacuoles in infected macrophages

    • PLOS Pathogens
    • by Thao Thanh Tran, Carmen D. Mathmann, Marcela Gatica-Andrades, Rachel F. Rollo, Melanie Oelker, Johanna K. Ljungberg, Tam T. K. Nguyen, Alina Zamoshnikova, Lalith K. Kummari, Orry J. K. Wyer, Katharine M. Irvine, Javier Melo-Bolívar, Annette Gross, Darren Brown, Jeffrey Y. W. Mak, David P. Fairlie, Karl A. Hansford, Matthew A. Cooper, Rabina Giri, Veronika Schreiber, Shannon R. Joseph, Fiona Simpson, Timothy C. Barnett, Jörgen Johansson, Wendy Dankers, James Harris, Timothy J.

      • Listeria monocytogenes
      • Bacterial pathogens
  12. Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies

    • PLOS Pathogens
    • by Kwok-ho Lam, Jacqueline M. Tremblay, Kay Perry, Konstantin Ichtchenko, Charles B. Shoemaker, Rongsheng Jin

      • Clostridium botulinum
      • Bacterial pathogens
  13. Histone H3 deacetylation promotes host cell viability for efficient infection by Listeria monocytogenes

    • PLOS Pathogens
    • by Matthew J. G. Eldridge, Mélanie A. Hamon

      • Listeria monocytogenes
      • Bacterial pathogens
  14. γδ T cell IFNγ production is directly subverted by Yersinia pseudotuberculosis outer protein YopJ in mice and humans

    • PLOS Pathogens
    • by Timothy H. Chu, Camille Khairallah, Jason Shieh, Rhea Cho, Zhijuan Qiu, Yue Zhang, Onur Eskiocak, David G. Thanassi, Mark H. Kaplan, Semir Beyaz, Vincent W. Yang, James B. Bliska, Brian S. Sheridan

      • Yersinia
      • Bacterial pathogens
  15. H9N2 virus-derived M1 protein promotes H5N6 virus release in mammalian cells: Mechanism of avian influenza virus inter-species infection in humans

    • PLOS Pathogens
    • by Fangtao Li, Jiyu Liu, Jizhe Yang, Haoran Sun, Zhimin Jiang, Chenxi Wang, Xin Zhang, Yinghui Yu, Chuankuo Zhao, Juan Pu, Yipeng Sun, Kin-Chow Chang, Jinhua Liu, Honglei Sun

      • Viruses
  16. “Reading” a new chapter in protozoan parasite transcriptional regulation

    • PLOS Pathogens
    • Protozoan parasites continue to cause a significant health and economic burden worldwide. As infectious organisms, they pose unique and difficult challenges due to a level of conservation of critical eukaryotic cellular pathways with their hosts. Gene regulation has been pinpointed as an essential pathway with enough divergence to warrant investigation into therapeutically targeting.

      • Parasites
      • Toxoplasma gondii
  17. VgrG-dependent effectors and chaperones modulate the assembly of the type VI secretion system

    • PLOS Pathogens
    • by Xiaoye Liang, Tong-Tong Pei, Hao Li, Hao-Yu Zheng, Han Luo, Yang Cui, Ming-Xuan Tang, Ya-Jie Zhao, Ping Xu, Tao Dong The type VI secretion system (T6SS) is a spear-like nanomachine found in gram-negative pathogens for delivery of toxic effectors to neighboring bacterial and host cells. Its assembly requires a tip spike complex consisting of a VgrG-trimer, a PAAR protein, and the interacting effectors. However, how the spike controls T6SS assembly remains elusive.

      • Bacterial pathogens
      • Vibrio
  18. Yersinia remodels epigenetic histone modifications in human macrophages

    • PLOS Pathogens
    • by Indra Bekere, Jiabin Huang, Marie Schnapp, Maren Rudolph, Laura Berneking, Klaus Ruckdeschel, Adam Grundhoff, Thomas Günther, Nicole Fischer, Martin Aepfelbacher

      • Yersinia
      • Bacterial pathogens
  19. Flagellin lysine methyltransferase FliB catalyzes a [4Fe-4S] mediated methyl transfer reaction

    • PLOS Pathogens
    • by Chu Wang, Christian Nehls, Dirk Baabe, Olaf Burghaus, Robert Hurwitz, Thomas Gutsmann, Martin Bröring, Michael Kolbe The methyltransferase FliB posttranslationally modifies surface-exposed ɛ-N-lysine residues of flagellin, the protomer of the flagellar filament in Salmonella enterica (S. enterica). Flagellin methylation, reported originally in 1959, was recently shown to enhance host cell adhesion and invasion by increasing the flagellar hydrophobicity.

      • Bacterial pathogens
      • Salmonella
  20. The gatekeeper of Yersinia type III secretion is under RNA thermometer control

    • PLOS Pathogens
    • by Stephan Pienkoß, Soheila Javadi, Paweena Chaoprasid, Thomas Nolte, Christian Twittenhoff, Petra Dersch, Franz Narberhaus

      • Yersinia
      • Bacterial pathogens
  21. Targeted transcriptomics reveals signatures of large-scale independent origins and concerted regulation of effector genes in Radopholus similis

    • PLOS Pathogens
    • by Paulo Vieira, Roxana Y. Myers, Clement Pellegrin, Catherine Wram, Cedar Hesse, Thomas R. Maier, Jonathan Shao, Georgios D. Koutsovoulos, Inga Zasada, Tracie Matsumoto, Etienne G. J. Danchin, Thomas J. Baum, Sebastian Eves-van den Akker, Lev G. Nemchinov

  22. CD4+ T cell immunity to Salmonella is transient in the circulation

    • PLOS Pathogens
    • by Newton G. Peres, Nancy Wang, Paul Whitney, Sven Engel, Meghanashree M. Shreenivas, Ian Comerford, Dianna M. Hocking, Anna B. Erazo, Irmgard Förster, Andreas Kupz, Thomas Gebhardt, Shaun R. McColl, Stephen J. McSorley, Sammy Bedoui, Richard A. Strugnell

      • Salmonella
      • Bacterial pathogens
  23. Comparative transcriptional profiling of the early host response to infection by typhoidal and non-typhoidal Salmonella serovars in human intestinal organoids

    • PLOS Pathogens
    • by Basel H. Abuaita, Anna-Lisa E. Lawrence, Ryan P. Berger, David R. Hill, Sha Huang, Veda K. Yadagiri, Brooke Bons, Courtney Fields, Christiane E. Wobus, Jason R. Spence, Vincent B. Young, Mary X. O’Riordan Salmonella enterica represents over 2500 serovars associated with a wide-ranging spectrum of disease; from self-limiting gastroenteritis to invasive infections caused by non-typhoidal serovars (NTS) and typhoidal serovars, respectively.

      • Bacterial pathogens
      • Salmonella
  24. Knockin mouse models demonstrate differential contributions of synaptotagmin-1 and -2 as receptors for botulinum neurotoxins

    • PLOS Pathogens
    • by Hatim Thaker, Jie Zhang, Shin-Ichiro Miyashita, Vivian Cristofaro, SunHyun Park, Ali Hashemi-Gheinani, Maryrose P. Sullivan, Rosalyn M. Adam, Min Dong

      • Clostridium botulinum
      • Bacterial pathogens
  25. Acquisition of yersinia murine toxin enabled Yersinia pestis to expand the range of mammalian hosts that sustain flea-borne plague

    • PLOS Pathogens
    • by David M. Bland, Adélaïde Miarinjara, Christopher F. Bosio, Jeanette Calarco, B. Joseph Hinnebusch

      • Yersinia
      • Bacterial pathogens