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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 51 - 75 of 226

  1. Rethinking the uncertainty of African swine fever virus contamination in feed ingredients and risk of introduction into the United States

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Economically relevant pathogens, such as African swine fever virus (ASFV), have been shown to survive when experimentally inoculated in some feed ingredients under the environmental conditions in transoceanic transport models. However, these models did not characterize the likelihood of virus survival under various time and temperature processes that feed ingredients undergo before they are added to swine diets.

  2. Characterization and protective effects of lytic bacteriophage pAh6.2TG against a pathogenic multidrug‐resistant Aeromonas hydrophila in Nile tilapia (Oreochromis niloticus)

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  3. Seroprevalence trend of human brucellosis and MLVA genotyping characteristics of Brucella melitensis in Shaanxi Province, China, during 2008–2020

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  4. Epidemiological verification of the mechanism of occurrence of atypical L‐type bovine spongiform encephalopathy

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Since 2004, a novel bovine spongiform encephalopathy (BSE), distinct from the conventional ‘classical BSE’ (C-BSE), has been reported as an atypical BSE. Atypical BSE is detected mostly in aged cattle, and it is suggested that atypical BSE may occur spontaneously.

  5. A single amino acid at position 158 in hemagglutinin affects the antigenic property of Eurasian Avian‐like H1N1 Swine influenza viruses

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Viruses
  6. A mixed‐methods study of stakeholders’ practices and attitudes on avian influenza H7N9 vaccination for the yellow broiler industry in Guangxi, China

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Viruses
  7. Belgian bulk tank milk surveillance program reveals the impact of a continuous vaccination protocol for small ruminants against Coxiella burnetii

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  8. Efficacy of Brucella abortus S19 and RB51 vaccine strains: a systematic review and meta‐analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  9. Ubiquitous Influenza A virus in Chilean swine before the H1N1pdm09 introduction

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Influenza A virus (IAV) was a neglected swine pathogen in South America before the 2009 H1N1 pandemic (A(H1N1)pdm2009). The A(H1N1)pdm2009 strain has widely spread among the Chilean swine population and co-circulates with endemic H1N2 and H3N2 viruses. The presence of IAV as a swine pathogen in Chilean swine before the 2009 pandemic is unknown.

      • Viruses
  10. The risk and mitigation of foot‐and‐mouth disease virus infection of pigs through consumption of contaminated feed

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Transboundary movement of animal feed and feed ingredients has been identified as a route for pathogen incursions. While imports of animals and animal-derived products are highly regulated for the purpose of infectious disease prevention, there has been less consideration of the viability of infectious agents in inanimate products, such as feed.

  11. New perspectives for evaluating relative risks of African swine fever virus contamination in global feed ingredient supply chains

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. There are no published reports indicating that African swine fever virus (ASFV) has been detected in feed ingredients or complete feed. This is primarily because there are only a few laboratories in the world that have the biosecurity and analytical capabilities of detecting ASFV in feed.

  12. Evolutionary history and spatiotemporal dynamic of GIII norovirus: from emergence to classification in 4 genotypes

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Noroviruses belong to a genetically diverse group of viruses infecting a wide range of mammalian host species., and those detected in cattle and sheep are classified within genogroup III (GIII).

      • Norovirus
      • Viruses
  13. A Pilot Study Revealing Host‐Associated Genetic Signatures for Source attribution of Sporadic Campylobacter jejuni Infection in Egypt

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Campylobacter jejuni (C. jejuni), is considered among the most common bacterial causes of human bacterial gastroenteritis worldwide. The epidemiology and the transmission dynamics of campylobacteriosis in Egypt remain poorly defined due to the limited use of high-resolution typing methods. In this pilot study, we evaluated the discriminatory power of multiple typing ‘gene-by-gene based’ techniques to characterize C.

      • Campylobacter
      • Bacterial pathogens
  14. The PB2 Co‐adaptation of H10N8 Avian Influenza Virus Increases the Pathogenicity to Chickens and Mice

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Avian influenza (AI) is an important zoonotic disease, which can be transmitted across species barriers to other hosts, especially humans, posing a serious threat to the poultry industry and public health.

      • Viruses
  15. Characterization of Four Novel H5N6 Avian Influenza Viruses with the Internal Genes from H5N1 and H9N2 Viruses and Experimental Challenge of Chickens Vaccinated with Current Commercially Available H5 Vaccines

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Since 2014, highly pathogenic avian influenza H5N6 viruses have been responsible for outbreaks in poultry. In this study, four H5N6 virus strains were isolated from fecal samples of sick white ducks and dead chickens in Shandong in 2019. These H5N6 viruses were triple‐reassortant viruses that have not been previously characterized. Their HA genes were derived from the H5 viruses and were closely related to the vaccine strain Re‐11.

      • Viruses
  16. H7N6 low pathogenic avian influenza outbreak in commercial turkey farms in Chile caused by a native South American Lineage

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 68, Issue 1, Page 2-12, January 2021. In December 2016, low pathogenic avian influenza (LPAI) caused by an H7N6 subtype was confirmed in a grow‐out turkey farm located in Valparaiso Region, Chile. Depopulation of exposed animals, zoning, animal movement control and active surveillance were implemented to contain the outbreak.

      • Viruses
  17. Evaluation of three immunological assays to mitigate the risk of transboundary spread of Coxiella burnetii by alpacas

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Coxiella burnetii causes coxiellosis in animals and Q fever in humans, a potentially debilitating zoonotic disease commonly transmitted through domestic ruminants. To prevent transboundary spread of C. burnetii, animals may be tested prior to export. In alpacas, this process is complicated by the lack of scientific evidence for C.

      • Bacterial pathogens
  18. Absence of proteinase K resistant PrP in Korean Holstein cattle carrying potential bovine spongiform encephalopathy‐related E211K somatic mutation

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Bovine spongiform encephalopathy (BSE) is a kind of prion disease caused by proteinase K‐resistant prion protein (PrPSc) in cattle. Although BSE has been reported worldwide, BSE‐infected cases have never been reported in Korea. In a previous study, we identified BSE‐related somatic mutation E211K in 3 Korean Holstein cattle. In Korea, the BSE surveillance system has been established.

  19. Characterization of Shiga Toxin‐Producing Escherichia coli Isolated From Cattle and Sheep in Xinjiang Province, China, Using Whole‐Genome Sequencing

    • Transboundary and Emerging Diseases
    • Shiga toxin‐producing Escherichia coli (STEC) is an important foodborne pathogen capable of causing severe gastrointestinal diseases in humans. Cattle and sheep are the natural reservoir hosts of STEC strains. Previously, we isolated 56 STEC strains from anal and carcass swab samples of cattle and sheep in farms and slaughterhouses.

      • Bacterial pathogens
  20. Risk Mapping of Highly Pathogenic Avian Influenza H5 during 2012‐2017 in Taiwan with Spatial Bayesian Modeling: Implications for Surveillance and Control Policies

    • Transboundary and Emerging Diseases
    • During 2012–2017, a total of 1,144 highly pathogenic avian influenza (HPAI) H5 outbreaks were reported in Taiwan. We conjectured the current 3‐km radius of the post‐outbreak containment policy could fail to effectively alleviate the current ongoing epidemics of HPAI H5 in Taiwan.

      • Viruses
  21. Genetic characterization of Highly Pathogenic Avian Influenza H5Nx clade 2.3.4.4b reveals independent introductions in Nigeria

    • Transboundary and Emerging Diseases
    • Among recurrent sanitary emergencies able to spread rapidly worldwide, avian influenza is one of the main constraints for animal health and food security. In West Africa, Nigeria has been experiencing repeated outbreaks of different strains of avian influenza virus (AIV) since 2006 and is also recognized as a hotspot in the region for the introduction of emerging strains by migratory wild birds.

      • Viruses
  22. Astrovirus VA1 in patients with acute gastroenteritis

    • Transboundary and Emerging Diseases
    • Human astroviruses (AstVs) are usually associated with acute gastroenteritis. In recent years, atypical animal‐like AstVs have been identified but their pathogenic role in humans has not been determined. Starting from 2010, there has been a growing evidence that AstVs may also be associated with encephalitis in human and animal hosts.

  23. Serological Prevalence and Molecular Characterisation of Hepatitis E Virus in Imported Pigs in Singapore (2000‐2019)

    • Transboundary and Emerging Diseases
    • Hepatitis E is a significant liver disease caused by infection with Hepatitis E virus (HEV). The risk factors for hepatitis E in developed countries include blood transfusion and ingestion of undercooked meat or meat products derived from HEV‐infected animals. Since 2000, there have been increased human hepatitis E incidence reported in Singapore. Although the causes of this increase have not been established, several studies have linked zoonotic HEV infections in humans to pork consumption.

      • Hepatitis
      • Viruses
  24. Cryptosporidiosis outbreak caused by Cryptosporidium parvum subtype IIdA20G1 in neonatal calves

    • Transboundary and Emerging Diseases
    • Cryptosporidium parvum is a major zoonotic pathogen responsible for outbreaks of severe diarrhea in humans and calves. Almost all investigations of cryptosporidiosis outbreaks caused by C. parvum have focused on its IIa subtype family in industrialized nations. From December 2018 to April 2019, approximately 200 neonatal calves on a large cattle farm in Hebei Province, China were diagnosed with watery diarrhea and over 40 died.

      • Cryptosporidium parvum
      • Parasites
  25. Duck hepatitis A virus 1 has lymphoid tissue tropism altering the organic immune responses of mature ducks

    • Transboundary and Emerging Diseases
    • Duck hepatitis A virus 1 (DHAV‐1) is a highly prevalent pathogen within adult ducks causing acute as well as chronic hepatitis which closely emulates the progression of human hepatitis. However, the underlying mechanisms of DHAV‐1 persistence and the pathogenesis of chronic liver disease are not well defined. The association between hematopoietic reservoirs of virus and persistent infection is increasingly concerning.

      • Viruses
      • Hepatitis