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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 126 - 150 of 243

  1. Seasonal influenza activity in young children before the COVID‐19 outbreak in Wuhan, China

    • Transboundary and Emerging Diseases
    • During the first wave of COVID‐19 in China, the attack rate of coronavirus disease 2019 (COVID‐19) in children was much lower than in adults, and most child cases had mild symptoms (Dong et al 2020). However, the secondary attack rate of COVID‐19 among close contacts was later found similar between children and other age groups (Bi et al). In Wuhan, Hubei province, China, there was only one paediatric case of COVID‐19 officially reported before January 22, 2020.

      • Viruses
      • COVID-19
  2. Humidity is a consistent climatic factor contributing to SARS‐CoV‐2 transmission

    • Transboundary and Emerging Diseases
    • There is growing evidence that climatic factors could influence the evolution of the current COVID‐19 pandemic. Here, we build on this evidence base, focusing on the southern hemisphere summer and autumn period. The relationship between climatic factors and COVID‐19 cases in New South Wales, Australia was investigated during both the exponential and declining phases of the epidemic in 2020, and in different regions.

      • Viruses
      • COVID-19
  3. Detection of SARS‐CoV‐2 in pets living with COVID‐19 owners diagnosed during the COVID‐19 lockdown in Spain: A case of an asymptomatic cat with SARS‐CoV‐2 in Europe

    • Transboundary and Emerging Diseases
    • Pets from COVID‐19 owners were screened for SARS‐CoV‐2 (April‐May 2020). From 23 pets, an asymptomatic cat showed positive RT‐qPCRs results from oropharyngeal swab (negative rectal swab). Remaining pets were negative. This suggests that cats can contract the virus from their infected owners and may act as potential hosts for SARS‐CoV‐2. Their role in carrying live or infectious viruses and disseminating them needs more investigation.

      • Viruses
      • COVID-19
  4. Challenges and prospects of COVID‐19 vaccine development based on the progress made in SARS and MERS vaccine development

    • Transboundary and Emerging Diseases
    • The outbreak of COVID‐19 as a pandemic has shaken the global health system and economy by their roots. This epidemic is still spreading and showing no signs of decreasing trend. Vaccination could be the only effective and economical means to control this pandemic. A number of research institutions and pharmaceutical companies have plunged into the race of vaccine development against COVID‐19 which are in various stages of development.

      • Viruses
      • COVID-19
  5. Recent progress on the diagnosis of 2019 Novel Coronavirus

    • Transboundary and Emerging Diseases
    • Coronavirus disease 2019 (COVID‐19) caused by severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) has become a global pandemic. Therefore, convenient, timely and accurate detection of SARS‐CoV‐2 is urgently needed. Here, we review the types, characteristics and shortcomings of various detection methods, as well as perspectives for the SARS‐CoV‐2 diagnosis. Clinically, nucleic acid‐based methods are sensitive but prone to false‐positive.

      • Viruses
      • COVID-19
  6. Supporting pandemic response using genomics and bioinformatics: A case study on the emergent SARS‐CoV‐2 outbreak

    • Transboundary and Emerging Diseases
    • Pre‐clinical responses to fast‐moving infectious disease outbreaks heavily depend on choosing the best isolates for animal models that inform diagnostics, vaccines and treatments. Current approaches are driven by practical considerations (e.g. first available virus isolate) rather than a detailed analysis of the characteristics of the virus strain chosen, which can lead to animal models that are not representative of the circulating or emerging clusters.

      • Viruses
      • COVID-19
  7. Explanation for COVID‐19 infection neurological damage and reactivations

    • Transboundary and Emerging Diseases
      • Viruses
      • COVID-19
  8. High COVID‐19 virus replication rates, the creation of antigen–antibody immune complexes and indirect haemagglutination resulting in thrombosis

    • Transboundary and Emerging Diseases
      • Viruses
      • COVID-19
  9. Epidemiological and clinical characteristics of 333 confirmed cases with coronavirus disease 2019 in Shanghai, China

    • Transboundary and Emerging Diseases
    • Coronavirus disease 2019 (COVID‐19) is an emerging infectious disease first identified in Wuhan City, Hubei Province, China. As of 19 February 2020, there had been 333 confirmed cases reported in Shanghai, China. This study elaborates on the epidemiological and clinical characteristics of COVID‐19 based on a descriptive study of the 333 patients infected with COVID‐19 in Shanghai for the purpose of probing into this new disease and providing reference.

      • Viruses
      • COVID-19
  10. COVID‐19 drug repurposing: Summary statistics on current clinical trials and promising untested candidates

    • Transboundary and Emerging Diseases
    • Repurposing of existing anti‐viral drugs, immunological modulators and supportive therapies represents a promising path towards rapidly developing new control strategies to mitigate the devastating public health consequences of the COVID‐19 pandemic.

      • Viruses
      • COVID-19
  11. Molecular detection of myxoma virus in the environment of vaccinated rabbitries

    • Transboundary and Emerging Diseases
    • Myxoma virus (MYXV) is the aetiological agent of myxomatosis, a systemic, mostly lethal disease that affects European rabbits. Vaccination against it, although widespread, has not been completely effective and disease outbreaks still take place on farms which carry out vaccination programmes.

      • Heavy Metals
      • Chemical contaminants
  12. Accidental exposure to Brucella abortus vaccines and occupational brucellosis among veterinarians in Minas Gerais state, Brazil

    • Transboundary and Emerging Diseases
    • Brucellosis is an important occupational disease, mainly among veterinarians, because of their frequent contact with sick animals, contaminated secretions and live attenuated anti‐Brucella vaccines.

      • Bacterial pathogens
  13. Hepatitis E Virus (HEV) infection in captive white‐collared peccaries (Pecari tajacu) from Uruguay.

    • Transboundary and Emerging Diseases
    • Hepatitis E virus (HEV) infection is a major cause of acute hepatitis worldwide. Clinical presentation of hepatitis E mainly occurs as an acute and self‐limited disease, though chronic cases are now being commonly reported in immunocompromised individuals. In high‐income developed areas and non‐endemic regions, HEV is mainly transmitted by the zoonotic route through direct contact with infected animals or by consumption of contaminated meat products.

      • Hepatitis
      • Viruses
  14. Factors influencing chicken farmers' decisions to implement prevention and control measures to reduce avian influenza virus spread under endemic conditions

    • Transboundary and Emerging Diseases
    • The ongoing circulation of Highly Pathogenic Avian Influenza (HPAI) H5N1 poses a threat to both poultry and public health. Adapting the constructs of the Health Belief Model (HBM) framework, we investigated perceptions of backyard, commercial broiler and layer chicken farmers to implement HPAI prevention and control measures in Bangladesh. Two cross‐sectional studies were conducted in 2016 and 2017 on 144 backyard, 106 broiler and 113 layer chicken farms.

      • Viruses
  15. Isolation and characterization of multidrug‐resistant Klebsiella pneumoniae from raw cow milk in Jiangsu and Shandong provinces, China

    • Transboundary and Emerging Diseases
    • Antimicrobials are the most important therapy to bovine mastitis. Bacterial infection and antibiotic treatment of mastitis cycles frequently in dairy farms worldwide, giving rise to concerns about the emergence of multidrug‐resistant (MDR) bacteria. In this study, we examined the microbial diversity and antibiotic resistance profiles of bacteria isolated from raw milk from dairy farms in Jiangsu and Shandong provinces, China.

      • Staphylococcus aureus
      • Bacterial pathogens
  16. Development of a multiplex assay for antibody detection in serum against pathogens affecting ruminants

    • Transboundary and Emerging Diseases
    • Numerous infectious diseases impacting livestock impose an important economic burden, and in some cases also represent a threat to humans and are classified as zoonoses. Some zoonotic diseases are transmitted by vectors and, due to complex environmental and socio‐ecconomic factors, the distribution of many of these pathogens is changing, with increasing numbers being found in previously unaffected countries.

      • Bacterial pathogens
  17. First report of a livestock‐associated methicillin‐resistant Staphylococcus aureus ST126 harboring the mecC variant in Brazil

    • Transboundary and Emerging Diseases
    • Staphylococcus aureus is a versatile and highly adaptable pathogen associated with a wide range of infectious diseases in humans and animals. In the last decades, concern has increased worldwide due to the emergence and spread of methicillin‐resistant S. aureus (MRSA) strains shortly after this drug became a therapeutic option.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Global trends of epidemiological research in livestock tuberculosis for the last four decades

    • Transboundary and Emerging Diseases
    • Animal tuberculosis (TB) caused by Mycobacterium tuberculosis complex (MTC) bacteria remains as one of the most significant infectious diseases of livestock, despite decades of eradication programs and research efforts, in an era where the livestock sector is amongst the most important and rapidly expanding commercial agricultural segments worldwide.

      • Bacterial pathogens
  19. An expert opinion assessment of blood‐feeding arthropods based on their capacity to transmit African Swine Fever virus in Metropolitan France

    • Transboundary and Emerging Diseases
    • To deal with the limited literature data on the vectorial capacity of blood‐feeding arthropods (BFAs) and their role in the transmission of African Swine Fever virus (ASFV) in Metropolitan France, a dedicated working group of the French Agency for Food, Environmental and Occupational Health & Safety performed an expert knowledge elicitation. In total, 15 different BFAs were selected as potential vectors by the ad hoc working group involved.

  20. Spatiotemporal dynamics of drug‐resistant Mycobacterium tuberculosis: Contrasting trends and implications for tuberculosis control in EU high‐priority country

    • Transboundary and Emerging Diseases
    • Different and contrasting trends related to human migration and the implementation of health control programs influence the spread of drug‐resistant tuberculosis (TB). We analyzed the Mycobacterium tuberculosis population structure in Estonia, a high‐priority EU country for TB control, to detect the dynamic changes and underlying factors. The study collection included 278 M. tuberculosis isolates recovered in 1999 and 2014–2015.

      • Bacterial pathogens
  21. Health profile of free‐range wild boar (Sus scrofa) subpopulations hunted in Santa Catarina state, Brazil

    • Transboundary and Emerging Diseases
    • Wild boars represent a potential dissemination source of important pathogens to public and animal health, since they can host several pathogens. This study aimed to evaluate the health profile of wild boars hunted for population control in the state of Santa Catarina, south of Brazil. For this study, tissue and blood samples were collected from 61 wild boars hunted from October 2017 to November 2018.

      • Hepatitis
      • Bacterial pathogens
      • Viruses
  22. Chicken‐source Escherichia coli within Phylogroup F Shares Virulence Genotypes and is Closely Related to Extraintestinal pathogenic E. coli (ExPEC) Causing Human Infections

    • Transboundary and Emerging Diseases
    • ExPEC is an important pathogen that causes diverse infection in the humans extraintestinal sites. Although avian‐source phylogroup F E. coli isolates hold a high level of virulence traits, few studies have systematically assessed the pathogenicity and zoonotic potential of E. coli isolates within phylogroup F. A total of 1332 E. coli strains were recovered from chicken colibacillosis in China from 2012 to 2017. About 21.7% of chicken‐source E. coli isolates were presented in phylogroup F.

      • Bacterial pathogens
  23. Factors associated with the prevalence of antibodies against Brucella abortus in water buffaloes from Santarém, Lower Amazon region, Brazil

    • Transboundary and Emerging Diseases
    • We evaluated the factors associated with the prevalence of antibodies against Brucella abortus in buffaloes in the municipality of Santarém, Western Pará, northern Brazil. The study was conducted on 60 farms, representing 25.8% of the total buffalo farms in the region. From those farms, a total of 426 buffaloes were sampled, males of any age and females more than 24 months of age, to avoid a false‐positive reaction in the serological test due to vaccination.

      • Bacterial pathogens
  24. Seroepidemiological and molecular investigation of spotted fever group rickettsiae and Coxiella burnetii in Sao Tome Island: A One Health approach

    • Transboundary and Emerging Diseases
    • Spotted fever group rickettsiae (SFGR) and Coxiella burnetii are intracellular bacteria that cause potentially life‐threatening tick‐borne rickettsioses and Q fever respectively. Sao Tome and Principe (STP), small islands located in the Gulf of Guinea, recently experienced a dramatic reduction in the incidence of malaria owing to international collaborative efforts. However, unexplained febrile illnesses persist. A One Health approach was adopted to investigate exposure to SFGR and C.

      • Bacterial pathogens
  25. High genetic diversity and differentiation of the Babesia ovis population in Turkey

    • Transboundary and Emerging Diseases
    • Babesia ovis is a tick‐transmitted protozoan haemoparasite causing ovine babesiosis in sheep and goats leading to considerable economic loss in Turkey and neighbouring countries. There are no vaccines available, therapeutic drugs leave toxic residues in meat and milk, and tick vector control entails environmental risks.

      • Antibiotic residues
      • Chemical contaminants