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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 426 - 450 of 585

  1. Pectic oligosaccharide structure-function relationships: Prebiotics, inhibitors of Escherichia coli O157:H7 adhesion and reduction of Shiga toxin cytotoxicity in HT29 cells

    • Food Chemistry
    • Publication date: 15 July 2017
      , Volume 227

      Author(s): Rong Di, Malathi S. Vakkalanka, Chatchaya Onumpai, Hoa K. Chau, Andre White, Robert A. Rastall, Kit Yam, Arland T. Hotchkiss

      • Escherichia coli O157:H7
      • Bacterial pathogens
  2. Population and evolutionary dynamics of Shiga-toxin Producing Escherichia coli O157 in a beef herd: A longitudinal study

    • Environmental Microbiology
    • Abstract

      • Bacterial pathogens
  3. Shiga (Vero)-toxin producing Escherichia coli isolated from the hospital foods; virulence factors, o-serogroups and antimicrobial resistance properties

    • Antimicrobial Resistance & Infection Control
    • Background

  4. Clinical Microbiology Laboratories' Adoption of Culture-Independent Diagnostic Tests Is a Threat to Foodborne-Disease Surveillance in the United States [Point-Counterpoint]

    • Journal of Clinical Microbiology
    • INTRODUCTION

      • Bacterial pathogens
  5. Paediatric HUS Cases Related to the Consumption of Raw Milk Sold by Vending Machines in Italy: Quantitative Risk Assessment Based on Escherichia coli O157 Official Controls over 7 years

    • Zoonoses and Public Health
    • Summary

      • Bacterial pathogens
  6. Evaluation of the Performance of the IQ-Check Kits and the USDA Microbiology Laboratory Guidebook Methods for Detection of Shiga Toxin-Producing E. coli (STEC) and STEC and Salmonella Simultaneously in Ground Beef

    • Journal of Applied Microbiology
    • Abstract

      Aims

      To evaluate the performance of the IQ-Check kits and the USDA Microbiology Laboratory Guidebook (MLG) methods for detection of the top 7 Shiga toxin-producing E. coli (STEC) (O157:H7, O26, O45, O103, O111, O121, and O145) in ground beef and both STEC and Salmonella in co-inoculated samples.

      • Salmonella
      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  7. Evaluating the efficacy of beef slaughter line interventions by quantifying the six major non-O157 Shiga toxin producing Escherichia coli serogroups using real-time multiplex PCR

    • Food Microbiology
    • Publication date: May 2017
      , Volume 63

      Author(s): Kaushi S.T. Kanankege, Kelly S. Anklam, Catherine M. Fick, Megan J. Kulow, Charles W. Kaspar, Barbara H. Ingham, Andrew Milkowski, Dörte Döpfer

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  8. Comparative Evaluation of Genomic and Laboratory Approaches for Determination of Shiga Toxin Subtypes in Escherichia coli

    • Journal of Food Protection
    • The determination of Shiga toxin (ST) subtypes can be an important element in the risk characterization of foodborne ST-producing Escherichia coli (STEC) isolates for making risk management decisions.

      • Bacterial pathogens
  9. Genomic Tools for Customized Recovery and Detection of Foodborne Shiga Toxigenic Escherichia coli

    • Journal of Food Protection
    • Genomic antimicrobial resistance (AMR) prediction tools have the potential to support foodborne illness outbreak investigations through their application in the analysis of bacterial genomes from causative strains. The AMR marker profile of a strain of interest, initially identified in outbreak-associated clinical samples, may serve as the basis for customization of selective enrichment media, facilitating its recovery from samples in a food safety investigation.

      • Bacterial pathogens
  10. Toxins, Vol. 8, Pages 357: A Topographical Atlas of Shiga Toxin 2e Receptor Distribution in the Tissues of Weaned Piglets

    • Toxins
    • Shiga toxin (Stx) 2e of Stx-producing Escherichia coli (STEC) is the primary virulence factor in the development of pig edema disease shortly after weaning. Stx2e binds to the globo-series glycosphingolipids (GSLs) globotriaosylceramide (Gb3Cer, Galα1-4Galβ1-4Glcβ1-1Cer) and globotetraosylceramide (Gb4Cer, GalNAcβ1-3Galα1-4Galβ1-4Glcβ1-1Cer), the latter acting as the preferential Stx2e receptor.

      • Bacterial pathogens
  11. Occurrence and characterization of food-borne pathogens isolated from fruit, vegetables and sprouts retailed in the Czech Republic

    • Food Microbiology
    • Publication date: May 2017
      , Volume 63

      Author(s): Hana Vojkovská, Petra Myšková, Tereza Gelbíčová, Alena Skočková, Ivana Koláčková, Renáta Karpíšková

      • Bacterial pathogens
      • Staphylococcus aureus
      • Listeria monocytogenes
  12. Longitudinal Study of Two Irish Dairy Herds: Low Numbers of Shiga Toxin-Producing Escherichia coli O157 and O26 Super-Shedders Identified

    • Frontiers in Microbiology
    • Brenda P. Murphy, Evonne McCabe, Mary Murphy, James F. Buckley, Dan Crowley, Séamus Fanning, Geraldine Duffy A 12-month longitudinal study was undertaken on two dairy herds to ascertain the Shiga-toxin producing Escherichia coli (STEC) O157 and O26 shedding status of the animals and its impact (if any) on raw milk. Cattle are a recognized reservoir for these organisms with associated public health and environmental implications. Animals shedding E.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  13. Pooled Nucleic Acid Amplification Test for Screening of Stool Specimens for Shiga Toxin-Producing Escherichia coli [Bacteriology]

    • Journal of Clinical Microbiology
    • Shiga toxin-producing Escherichia coli (STEC)-associated enteric illness is attributed to O157 and non-O157 serotypes; however, traditional culture-based methods underdetect non-O157 STEC. Labor and cost of consumables are major barriers to implementation of the CDC recommendation to test all stools for both O157 and non-O157 serotypes. We evaluated the feasibility of a pooled nucleic acid amplification test (NAAT) as an approach for screening stool specimens for STEC.

      • Bacterial pathogens
  14. Plasmids from Shiga Toxin-Producing Escherichia coli Strains with Rare Enterohemolysin Gene (ehxA) Subtypes Reveal Pathogenicity Potential and Display a Novel Evolutionary Path [Evolutionary and Genomic Microbiology]

    • Applied and Environmental Microbiology
    • Most Shiga toxin-producing Escherichia coli (STEC) strains associated with severe disease, such as hemolytic-uremic syndrome (HUS), carry large enterohemolysin-encoding (ehxA) plasmids, e.g., pO157 and pO103, that contribute to STEC clinical manifestations. Six ehxA subtypes (A through F) exist that phylogenetically cluster into eae-positive (B, C, F), a mix of eae-positive (E) and eae-negative (A), and a third, more distantly related, cluster of eae-negative (D) STEC strains.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  15. Fitness of Enterohemorrhagic Escherichia coli (EHEC)/Enteroaggregative E. coli O104:H4 in Comparison to That of EHEC O157: Survival Studies in Food and In Vitro [Food Microbiology]

    • Applied and Environmental Microbiology
    • In 2011, one of the world's largest outbreaks of hemolytic-uremic syndrome (HUS) occurred, caused by a rare Escherichia coli serotype, O104:H4, that shared the virulence profiles of Shiga toxin-producing E. coli (STEC)/enterohemorrhagic E. coli (EHEC) and enteroaggregative E. coli (EAEC). The persistence and fitness factors of the highly virulent EHEC/EAEC O104:H4 strain, grown either in food or in vitro, were compared with those of E. coli O157 outbreak-associated strains.

      • Bacterial pathogens
  16. Use of the Escherichia coli Identification Microarray for Characterizing the Health Risks of Shiga Toxin–Producing Escherichia coli Isolated from Foods

    • Journal of Food Protection
    • More than 470 serotypes of Shiga toxin–producing Escherichia coli (STEC) have been identified, but not all cause severe illness in humans. Most STEC that cause severe diseases can adhere to epithelial cells, produce specific stx subtypes, and belong to certain serotypes; therefore, these traits appear to be critical STEC risk factors. However, testing for these traits is labor intensive, and serotyping is inadequate because of extensive variations among E. coli O and H antigen types.

      • Bacterial pathogens
  17. Shiga (vero) toxin producing Escherichia coli in various types of food stuffs; virulence factors, O-serogroups and antimicrobial resistance properties

    • Journal of Food Safety
    • Abstract

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  18. Community-wide outbreak of haemolytic uraemic syndrome associated with Shiga toxin 2-producing Escherichia coli O26:H11 in southern Italy, summer 2013

    • Eurosurveillance
    • In summer 2013, an excess of paediatric cases of haemolytic uraemic syndrome (HUS) in a southern region of Italy prompted the investigation of a community-wide outbreak of Shiga toxin 2-producing Escherichia coli (STEC) O26:H11 infections. Case finding was based on testing patients with HUS or bloody diarrhoea for STEC infection by microbiological and serological methods. A case-control study was conducted to identify the source of the outbreak.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  19. Comprehensive Evaluation and Implementation of Improvement Actions in Butcher Shops

    • PLOS ONE
    • Gerardo A. Leotta, Victoria Brusa, Lucía Galli, Cristian Adriani, Luciano Linares, Analía Etcheverría, Marcelo Sanz, Adriana Sucari, Pilar Peral García, Marcelo Signorini

      • Bacterial pathogens
      • Staphylococcus aureus
      • Listeria monocytogenes
  20. Rapid Identification of Shiga Toxin–Producing Escherichia coli O Serogroups from Fresh Produce and Raw Milk Enrichment Cultures by Luminex Bead–Based Suspension Array

    • Journal of Food Protection
    • The U.S. Food and Drug Administration's Bacteriological Analytical Manual (BAM) Chapter 4a describes a Luminex microbead–based suspension array used to screen colonies for 11 clinically relevant Shiga toxin–producing Escherichia coli (STEC) serogroups: O26, O45, O91, O103, O104, O111, O113, O121, O128, O145, and O157. We evaluated the usefulness of this method to identify STEC-positive enrichment samples before agar plating. Twelve E.

      • Bacterial pathogens
  21. Ensuring safe reuse of residential wastewater: Reduction of microbes and genes using peat biofilter and batch chlorination in an on-site treatment system

    • Journal of Applied Microbiology
    • Abstract

      Aims

      A batch chlorination system was optimized for onsite wastewater treatment and reuse system (OWRS) and its efficiency was evaluated for reducing viruses, protozoa, bacteria, and antimicrobial resistance in cold and warm seasons.

  22. Mexican unpasteurised fresh cheeses are contaminated with Salmonella spp., non-O157 Shiga toxin producing Escherichia coli and potential uropathogenic E. coli strains: A public health risk

    • International Journal of Food Microbiology
    • Publication date: 21 November 2016
      , Volume 237

      Author(s): Rosa Guzman-Hernandez, Araceli Contreras-Rodriguez, Rosa Hernandez-Velez, Iza Perez-Martinez, Ahide Lopez-Merino, Mussaret B. Zaidi, Teresa Estrada-Garcia

  23. The Accessory Genome of Shiga Toxin-Producing Escherichia coli Defines a Persistent Colonization Type in Cattle [Environmental Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) strains can colonize cattle for several months and may, thus, serve as gene reservoirs for the genesis of highly virulent zoonotic enterohemorrhagic E. coli (EHEC). Attempts to reduce the human risk for acquiring EHEC infections should include strategies to control such STEC strains persisting in cattle. We therefore aimed to identify genetic patterns associated with the STEC colonization type in the bovine host.

  24. Disinfectant and Antimicrobial Susceptibility Profiles of the Big Six Non-O157 Shiga Toxin–Producing Escherichia coli Strains from Food Animals and Humans

    • Journal of Food Protection
    • The disinfectant and antimicrobial susceptibility profiles of 138 non-O157 Shiga toxin–producing Escherichia coli strains (STECs) from food animals and humans were determined. Antimicrobial resistance (AMR) was moderate (39.1% of strains) in response to 15 antimicrobial agents. Animal strains had a lower AMR prevalence (35.6%) than did human strains (43.9%) but a higher prevalence of the resistance profile GEN-KAN-TET.

      • Bacterial pathogens
  25. Genetic characterization of Shiga toxin-producing Escherichia coli (STEC) and atypical enteropathogenic Escherichia coli (EPEC) isolates from goat's milk and goat farm environment

    • International Journal of Food Microbiology
    • Publication date: 7 November 2016
      , Volume 236

      Author(s): María-Elena Álvarez-Suárez, Andrés Otero, María-Luisa García-López, Ghizlane Dahbi, Miguel Blanco, Azucena Mora, Jorge Blanco, Jesús A. Santos

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens