An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 451 - 475 of 585

  1. Thermal inactivation responses of acid adapted and non-adapted stationary phase Shiga toxin-producing Escherichia coli (STEC), Salmonella spp. and Listeria monocytogenes in orange juice

    • Food Control
    • Publication date: February 2017
      , Volume 72, Part A

      Author(s): Zeynal Topalcengiz, Michelle D. Danyluk

      • Listeria monocytogenes
      • Salmonella
      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  2. Characterisation of multidrug-resistant shiga toxin-producing escherichia coli cultured from pigs in china: co-occurrence of extended-spectrum β-lactamase- and mcr-1-encoding genes on plasmids

    • International Journal of Antimicrobial Agents
    • Publication date: Available online 1 August 2016


      Author(s): Li Bai, Daniel Hurley, Juan Li, Qiong Meng, Juan Wang, Séamus Fanning, Yanwen Xiong

      • Bacterial pathogens
  3. Factors Associated with Shiga Toxin-Producing Escherichia coli Shedding by Dairy and Beef Cattle [Environmental Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) is an important foodborne pathogen that can cause hemorrhagic colitis and hemolytic-uremic syndrome. Cattle are the primary reservoir for STEC, and food or water contaminated with cattle feces is the most common source of infections in humans.

      • Bacterial pathogens
  4. Prevalence and characterization of Shiga toxin-producing Escherichia coli (STEC) in fruits and vegetables sold at local street markets in Alexandria, Egypt

    • LWT
    • Publication date: December 2016
      Source:LWT - Food Science and Technology, Volume 74

      Author(s): Rowaida K.S. Khalil, Mohamed A.E. Gomaa

      • Bacterial pathogens
  5. Investigation of potential Shiga toxin producing Escherichia coli (STEC) associated with a local foodborne outbreak using multidisciplinary approaches

    • Food Science and Human Wellness
    • Publication date: Available online 25 July 2016
      Food Science and Human Wellness

      Author(s): Kristen A. Lozinak, Niketa Jani, Jayanthi Gangiredla, Isha Patel, Christopher A. Elkins, Zonglin Hu, Prince Kassim, Robert A. Myers, Pongpan Laksanalamai

      • Bacterial pathogens
  6. Serotypes, virulence markers and cell invasion ability of Shiga toxin-producing Escherichia coli (STEC) strains isolated from healthy dairy cattle

    • Journal of Applied Microbiology
    • Abstract

      Aim

      The occurrence of virulence markers, serotypes and invasive ability were investigated in Shiga toxin-producing Escherichia coli (STEC) isolated from fecal samples of healthy dairy cattle at Rio de Janeiro State, Brazil.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  7. Survival and Reduction of Shiga Toxin-Producing Escherichia coli in a Fresh Cold-Pressed Juice Treated with Antimicrobial Plant Extracts

    • Journal of Food Science
    • Abstract

      • Bacterial pathogens
  8. Survival and expression of acid resistance genes in Shiga toxin-producing Escherichia coli acid adapted in pineapple juice and exposed to synthetic gastric fluid

    • Journal of Applied Microbiology
    • Abstract

      Aims

      The aim of this research was to determine the ability of non-O157 Shiga toxin-producing E. coli (STEC) serogroups to survive with exposure to synthetic gastric fluid (SGF) after adaptation to pineapple juice (PJ) at room and refrigerated temperatures compared to E. coli O157:H7 and to examine the relative transcriptional expression of acid resistance (AR) genes, rpoS, gadA, and adiA.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  9. Vegetables and Restaurant Salads as a Reservoir for Shiga Toxigenic Escherichia coli: Distribution of Virulence Factors, O-Serogroups, and Antibiotic Resistance Properties

    • Journal of Food Protection
    • Close contact of vegetables with soil, polluted water, and animal manure and unsanitary conditions during processing of restaurant salads led us to study the distribution of virulence factors, O-serogroups, and antibiotic resistance properties in Shiga toxigenic Escherichia coli (STEC) isolated from vegetables and salads. Samples of vegetables and salad (n =420) were collected and evaluated for the presence of E. coli using culture and a PCR assay. Total prevalence of E.

      • Bacterial pathogens
  10. Epidemiological and Microbiological Investigation of an Outbreak of Severe Disease from Shiga Toxin–Producing Escherichia coli O157 Infection Associated with Consumption of a Slaw Garnish

    • Journal of Food Protection
    • Investigating outbreaks of Shiga toxin–producing Escherichia coli (STEC) in England is a priority due to the potential severity of disease. However, there are often challenges in investigating outbreaks due to the small numbers of cases, poor patient recall, and low levels of bacteria that are challenging to detect in food samples using traditional laboratory culture techniques, and frequently a source is not identified.

      • Bacterial pathogens
  11. Hybrid Shiga Toxin-Producing and Enterotoxigenic Escherichia sp. Cryptic Lineage 1 Strain 7v Harbors a Hybrid Plasmid [Evolutionary and Genomic Microbiology]

    • Applied and Environmental Microbiology
    • Hybrid isolates of Shiga toxin-producing Escherichia coli (STEC) and enterotoxigenic E. coli (ETEC) encoding heat-stable enterotoxin (ST) are being reported with increasing frequency from a variety of sources. However, information regarding the plasmids that these strains harbor is scarce. In this study, we sequence and characterize a plasmid, p7v, from the STEC/ETEC hybrid strain 7v. Whole-genome phylogenetic analyses of STEC/ETEC hybrid strains and prototype E.

      • Bacterial pathogens
  12. Detection of Zoonotic Enteropathogens in Children and Domestic Animals in a Semirural Community in Ecuador [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • Animals are important reservoirs of zoonotic enteropathogens, and transmission to humans occurs more frequently in low- and middle-income countries (LMICs), where small-scale livestock production is common. In this study, we investigated the presence of zoonotic enteropathogens in stool samples from 64 asymptomatic children and 203 domestic animals of 62 households in a semirural community in Ecuador between June and August 2014.

      • Campylobacter
      • Yersinia
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  13. Comparative Characterization of Shiga Toxin Type 2 and Subtilase Cytotoxin Effects on Human Renal Epithelial and Endothelial Cells Grown in Monolayer and Bilayer Conditions

    • PLOS ONE
    • Romina S. Álvarez, Flavia Sacerdoti, Carolina Jancic, Adrienne W. Paton, James C. Paton, Cristina Ibarra, María M. Amaral

      • Bacterial pathogens
  14. Long-term survival of the Shiga toxin-producing Escherichia coli O104:H4 outbreak strain on fenugreek seeds

    • Food Microbiology
    • Publication date: October 2016
      , Volume 59

      Author(s): Michael Knödler, Michael Berger, Ulrich Dobrindt

      • Bacterial pathogens
  15. Foodborne Bacterial Pathogens in Retail Prepacked Ready-to-Eat Mixed Ingredient Salads

    • Journal of Food Protection
    • Prepacked ready-to-eat mixed ingredient salads (RTE salads) are readily available whole meals that include a variety of ingredients such as raw vegetables, cooked meat, and pasta. As part of a trend toward healthy convenience foods, RTE salads have become an increasingly popular product among consumers. However, data on the incidence of foodborne pathogens in RTE salads are scarce.

  16. Variable tellurite resistance profiles of clinically-relevant Shiga toxin-producing Escherichia coli (STEC) influence their recovery from foodstuffs

    • Food Microbiology
    • Publication date: October 2016
      , Volume 59

      Author(s): Stéphane Kerangart, Thomas Douëllou, Sabine Delannoy, Patrick Fach, Lothar Beutin, Delphine Sergentet-Thévenot, Benoit Cournoyer, Estelle Loukiadis

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  17. Prevalence and behavior of multidrug-resistant shiga toxin-producing Escherichia coli, enteropathogenic E. coli and enterotoxigenic E. coli on coriander

    • Food Microbiology
    • Publication date: October 2016
      , Volume 59

      Author(s): Carlos A. Gómez-Aldapa, Jesús A. Segovia-Cruz, Jorge F. Cerna-Cortes, Esmeralda Rangel-Vargas, Laura P. Salas-Rangel, Eduardo J. Gutiérrez-Alcántara, Javier Castro-Rosas

      • Bacterial pathogens
  18. Short communication: Behavior of different Shiga toxin-producing Escherichia coli serotypes (O26:H11, O103:H2, O145:H28, O157:H7) during the manufacture, ripening, and storage of a white mold cheese

    • Journal of Dairy Science
    • Publication date: July 2016
      , Volume 99, Issue 7

      Author(s): S.D. Miszczycha, N. Bel, P. Gay-Perret, V. Michel, M.C. Montel, D. Sergentet-Thevenot

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  19. Shiga toxin-producing Escherichia coli strains isolated from dairy products — Genetic diversity and virulence gene profiles

    • International Journal of Food Microbiology
    • Publication date: 2 September 2016
      , Volume 232

      Author(s): T. Douëllou, S. Delannoy, S. Ganet, P. Mariani-Kurkdjian, P. Fach, E. Loukiadis, Mc. Montel, D. Thevenot-Sergentet

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  20. Prevalence and characteristics of verotoxigenic Escherichia coli strains isolated from pigs and pork products in Umbria and Marche regions of Italy

    • International Journal of Food Microbiology
    • Publication date: 2 September 2016
      , Volume 232

      Author(s): Laura Ercoli, Silvana Farneti, Alessia Zicavo, Guerriero Mencaroni, Giuliana Blasi, Gianluca Striano, Stefania Scuota

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  21. Effects of different media on the enrichment of low numbers of Shiga toxin-producing Escherichia coli in mung bean sprouts and on the development of the sprout microbiome

    • International Journal of Food Microbiology
    • Publication date: 2 September 2016
      , Volume 232

      Author(s): H. Margot, T. Tasara, M.H. Zwietering, H. Joosten, R. Stephan

      • Bacterial pathogens
  22. An interlaboratory study on efficient detection of Shiga toxin-producing Escherichia coli O26, O103, O111, O121, O145, and O157 in food using real-time PCR assay and chromogenic agar

    • International Journal of Food Microbiology
    • Publication date: 2 August 2016
      , Volume 230

      Author(s): Yukiko Hara-Kudo, Noriko Konishi, Kayoko Ohtsuka, Kaori Iwabuchi, Rie Kikuchi, Junko Isobe, Takumiko Yamazaki, Fumie Suzuki, Yuhki Nagai, Hiroko Yamada, Atsuko Tanouchi, Tetsuya Mori, Hiroshi Nakagawa, Yasufumi Ueda, Jun Terajima

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  23. Bacterial quality and safety of packaged fresh leafy vegetables at the retail level in Finland

    • International Journal of Food Microbiology
    • Publication date: 2 September 2016
      , Volume 232

      Author(s): L.-L. Nousiainen, S. Joutsen, J. Lunden, M.-L. Hänninen, M. Fredriksson-Ahomaa

      • Yersinia
      • Bacterial pathogens
      • Listeria monocytogenes
  24. Molecular Profiling of Shiga Toxin-Producing Escherichia coli and Enteropathogenic E. coli Strains Isolated from French Coastal Environments [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) and enteropathogenic E. coli (EPEC) strains may be responsible for food-borne infections in humans. Twenty-eight STEC and 75 EPEC strains previously isolated from French shellfish-harvesting areas and their watersheds and belonging to 68 distinguishable serotypes were characterized in this study. High-throughput real-time PCR was used to search for the presence of 75 E.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  25. Virulence Gene Profiles and Clonal Relationships of Escherichia coli O26:H11 Isolates from Feedlot Cattle as Determined by Whole-Genome Sequencing [Environmental Microbiology]

    • Applied and Environmental Microbiology
    • Escherichia coli O26 is the second most important enterohemorrhagic E. coli (EHEC) serogroup worldwide. Serogroup O26 strains are categorized mainly into two groups: enteropathogenic (EPEC) O26, carrying a locus of enterocyte effacement (LEE) and mostly causing mild diarrhea, and Shiga-toxigenic (STEC) O26, which carries the Shiga toxin (STX) gene (stx), responsible for more severe outcomes. stx-negative O26 strains can be further split into two groups.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens