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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 476 - 500 of 585

  1. Toxins, Vol. 8, Pages 157: Comparison of Droplet Digital PCR and qPCR for the Quantification of Shiga Toxin-Producing Escherichia coli in Bovine Feces

    • Toxins
    • Cattle are considered to be the main reservoir for Shiga toxin-producing Escherichia coli (STEC) and are often the direct or indirect source of STEC outbreaks in humans. Accurate measurement of the concentration of shed STEC in cattle feces could be a key answer to questions concerning transmission of STEC, contamination sources and efficiency of treatments at farm level.

      • Bacterial pathogens
  2. Effect of Deep-Frying or Conventional Oven Cooking on Thermal Inactivation of Shiga Toxin–Producing Cells of Escherichia coli in Meatballs

    • Journal of Food Protection
    • We investigated the effects of deep-frying or oven cooking on inactivation of Shiga toxin–producing cells of Escherichia coli (STEC) in meatballs. Finely ground veal and/or a finely ground beef-pork-veal mixture were inoculated (ca. 6.5 log CFU/g) with an eight-strain, genetically marked cocktail of rifampin-resistant STEC strains (STEC-8; O111:H, O45:H2, O103:H2, O104:H4, O121:H19, O145:NM, O26:H11, and O157:H7).

      • Bacterial pathogens
  3. Does antibiotic resistance influence shiga-toxigenic Escherichia coli O26 and O103 survival to stress environments?

    • Food Control
    • Publication date: October 2016
      , Volume 68

      Author(s): Mastura Akhtar, Alice Maserati, Francisco Diez-Gonzalez, Fernando Sampedro

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  4. Effect of the food matrix on pressure resistance of Shiga-toxin producing Escherichia coli

    • Food Microbiology
    • Publication date: August 2016
      , Volume 57

      Author(s): Hui Li, Rigoberto Garcia-Hernandez, Darcy Driedger, Lynn M. McMullen, Michael Gänzle

      • Bacterial pathogens
  5. Effect of Exposure Time and Organic Matter on Efficacy of Antimicrobial Compounds against Shiga Toxin–Producing Escherichia coli and Salmonella

    • Journal of Food Protection
    • Several antimicrobial compounds are in commercial meat processing plants for pathogen control on beef carcasses. However, the efficacy of the method used is influenced by a number of factors, such as spray pressure, temperature, type of chemical and concentration, exposure time, method of application, equipment design, and the stage in the process that the method is applied.

      • Bacterial pathogens
  6. Influence of Extracellular Cellulose and Colanic Acid Production on the Survival of Shiga Toxin–Producing Escherichia coli on Spinach and Lettuce after Chlorine Treatment

    • Journal of Food Protection
    • Shiga toxin–producing Escherichia coli (STEC) strains produce extracellular cellulose and colanic acid, which may influence stress tolerance. This study investigates the role of these extracellular polymers on the tolerance of STEC to chlorine treatment after attachment to lettuce and spinach. Four STEC strains, two wild-type cellulose-producing and their cellulose-deficient derivatives, were used. One strain pair produced colanic acid in addition to cellulose.

      • Bacterial pathogens
  7. Optimizing application parameters for lactic acid and sodium metasilicate against pathogens on fresh beef, pork and deli meats

    • Meat Science
    • Publication date: August 2016
      , Volume 118

      Author(s): Staci L. DeGeer, Luxin Wang, Gretchen N. Hill, Manpreet Singh, Sacit F. Bilgili, Christy L. Bratcher

      • Listeria monocytogenes
      • Bacterial pathogens
  8. Quality attributes and thermal inactivation of Shiga toxin-producing Escherichia coli in moisture enhanced, non-intact beef products are affected by pump rate, internal temperature, and resting time after cooking

    • Food Control
    • Publication date: October 2016
      , Volume 68

      Author(s): Cangliang Shen, Amanda McKeith, Courtney Broyles, Russell McKeith

      • Bacterial pathogens
  9. Emergence of a Multidrug-Resistant Shiga Toxin-Producing Enterotoxigenic Escherichia coli Lineage in Diseased Swine in Japan [Clinical Veterinary Microbiology]

    • Journal of Clinical Microbiology
    • Enterotoxigenic Escherichia coli (ETEC) and Shiga toxin-producing E. coli (STEC) are important causes of diarrhea and edema disease in swine. The majority of swine-pathogenic E. coli strains belong to a limited range of O serogroups, including O8, O138, O139, O141, O147, O149, and O157, which are the most frequently reported strains worldwide.

      • Shigella
      • Bacterial pathogens
  10. Toxins, Vol. 8, Pages 92: Rapid Detection of Escherichia coli O157 and Shiga Toxins by Lateral Flow Immunoassays

    • Toxins
    • Shiga toxin-producing Escherichia coli O157:H7 (STEC) cause food-borne illness that may be fatal. STEC strains enumerate two types of potent Shiga toxins (Stx1 and Stx2) that are responsible for causing diseases. It is important to detect the E. coli O157 and Shiga toxins in food to prevent outbreak of diseases. We describe the development of two multi-analyte antibody-based lateral flow immunoassays (LFIA); one for the detection of Stx1 and Stx2 and one for the detection of E.

      • Escherichia coli O157:H7
      • Bacterial pathogens
  11. AB5 Pre-assembly is Not Required for Shiga Toxin Activity

    • Journal of Bacteriology
    • Background: Shiga toxin (Stx) produced by pathogenic Escherichia coli (E. coli) is considered to be an AB5 heterohexamer; however no known mechanisms ensure AB5 assembly.

      Results: Stx released by E. coli is not in the AB5 conformation and assembles at receptor interface.

      Conclusion: Unassembled Stx can impart toxicity.

      Significance: Preventing AB5 assembly is a potential treatment for Stx associated illnesses.

      • Bacterial pathogens
  12. Heterogeneity in Induction Level, Infection Ability, and Morphology of Shiga Toxin-Encoding Phages (Stx Phages) from Dairy and Human Shiga Toxin-Producing Escherichia coli O26:H11 Isolates [Food Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin (Stx)-producing Escherichia coli (STEC) bacteria are foodborne pathogens responsible for diarrhea and hemolytic-uremic syndrome (HUS). Shiga toxin, the main STEC virulence factor, is encoded by the stx gene located in the genome of a bacteriophage inserted into the bacterial chromosome. The O26:H11 serotype is considered to be the second-most-significant HUS-causing serotype worldwide after O157:H7.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  13. The functions of the variable lipoprotein family of Mycoplasma hyorhinis in adherence to host cells

    • Veterinary Microbiology
    • Publication date: 15 April 2016
      , Volume 186

      Author(s): Qiyan Xiong, Jia Wang, Yan Ji, Bo Ni, Bixiong Zhang, Qinghong Ma, Yanna Wei, Shaobo Xiao, Zhixin Feng, Maojun Liu, Guoqing Shao

      • Bacterial pathogens
  14. Improving the Enrichment and Plating Methods for Rapid Detection of Non-O157 Shiga Toxin–Producing Escherichia coli in Dairy Compost

    • Journal of Food Protection
    • A culture method to detect non-O157 Shiga toxin–producing Escherichia coli (STEC) was optimized in this study. The finished dairy compost with 30% moisture content was inoculated with a cocktail of six non-O157 STEC serovars at initial concentrations of 1 to 100 CFU/g.

      • Bacterial pathogens
  15. Prevalence and Level of Enterohemorrhagic Escherichia coli in Culled Dairy Cows at Harvest

    • Journal of Food Protection
    • The primary objective of this study was to determine the prevalence and level of enterohemorrhagic Escherichia coli (EHEC) O26, O45, O103, O111, O121, and O145 (collectively EHEC-6) plus EHEC O157 in fecal, hide, and preintervention carcass surface samples from culled dairy cows. Matched samples (n =300) were collected from 100 cows at harvest and tested by a culture-based method and two molecular methods: NeoSEEK STEC (NS) and Atlas STEC EG2 Combo.

      • Bacterial pathogens
  16. ConFerm – A tool to predict the reduction of pathogens during the production of fermented and matured sausages

    • Food Control
    • Publication date: September 2016
      , Volume 67

      Author(s): A. Gunvig, C. Borggaard, F. Hansen, T.B. Hansen, S. Aabo

      • Listeria monocytogenes
      • Bacterial pathogens
  17. Genetic features of human and bovine Escherichia coli O157:H7 strains isolated in Argentina

    • International Journal of Medical Microbiology
    • Publication date: Available online 22 February 2016


      Author(s): L. Pianciola, B.A. D’Astek, M. Mazzeo, I. Chinen, M. Masana, M. Rivas

      • Escherichia coli O157:H7
      • Bacterial pathogens
  18. Internalization and thermal susceptibility of Shiga toxin-producing Escherichia coli (STEC) in marinated beef products

    • Meat Science
    • Publication date: June 2016
      , Volume 116

      Author(s): S. Pokharel, J.C. Brooks, J.N. Martin, A. Echeverry, A.R. Parks, B. Corliss, M.M. Brashears

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  19. The Polymorphic Aggregative Phenotype of Shiga Toxin-Producing Escherichia coli O111 Depends on RpoS and Curli [Food Microbiology]

    • Applied and Environmental Microbiology
    • Escherichia coli O111 is an emerging non-O157:H7 serotype of Shiga toxin-producing E. coli (STEC). We previously reported that outbreak and environmental, but not sporadic-case, strains of STEC O111 share a distinct aggregation phenotype (M. E. Diodati, A. H. Bates, M. B. Cooley, S. Walker, R. E. Mandrell, and M. T. Brandl, Foodborne Pathog Dis 12:235–243, 2015, http://dx.doi.org/10.1089/fpd.2014.1887).

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  20. Colonization of Beef Cattle by Shiga Toxin-Producing Escherichia coli during the First Year of Life: A Cohort Study

    • PLOS ONE
    • Raies A. Mir, Thomas A. Weppelmann, Mauricio Elzo, Soohyoun Ahn, J. Danny Driver, KwangCheol Casey Jeong

      • Bacterial pathogens
  21. An Environmental Shiga Toxin-Producing Escherichia coli O145 Clonal Population Exhibits High-Level Phenotypic Variation That Includes Virulence Traits [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) serotype O145 is one of the major non-O157 serotypes associated with severe human disease. Here we examined the genetic diversity, population structure, virulence potential, and antimicrobial resistance profiles of environmental O145 strains recovered from a major produce production region in California.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  22. Standardized Escherichia coli O157:H7 Exposure Studies in Cattle Provide Evidence that Bovine Factors Do Not Drive Increased Summertime Colonization [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • The increased summertime prevalence of cattle carriage of enterohemorrhagic Shiga toxin-producing Escherichia coli O157:H7 (STEC O157) is associated with the increased summertime incidence of human infection. The mechanism driving the seasonality of STEC O157 carriage among cattle is unknown. We conducted experimental challenge trials to distinguish whether factors extrinsic or intrinsic to cattle underlie the seasonality of STEC O157 colonization.

      • Escherichia coli O157:H7
      • Bacterial pathogens
  23. Evaluation of detection methods for non-O157 Shiga toxin-producing Escherichia coli from food

    • International Journal of Food Microbiology
    • Publication date: 16 February 2016
      , Volume 219

      Author(s): Bavo Verhaegen, Inge Van Damme, Marc Heyndrickx, Nadine Botteldoorn, Mohamed Elhadidy, Karen Verstraete, Katelijne Dierick, Sarah Denayer, Lieven De Zutter, Koen De Reu

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  24. Targeted Amplicon Sequencing for Single-Nucleotide-Polymorphism Genotyping of Attaching and Effacing Escherichia coli O26:H11 Cattle Strains via a High-Throughput Library Preparation Technique [Evolutionary and Genomic Microbiology]

    • Applied and Environmental Microbiology
    • Enterohemorrhagic Escherichia coli (EHEC) O26:H11, a serotype within Shiga toxin-producing E. coli (STEC) that causes severe human disease, has been considered to have evolved from attaching and effacing E. coli (AEEC) O26:H11 through the acquisition of a Shiga toxin-encoding gene.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  25. Formalin-fixed cells as an internal standard approach for the detection and quantitative assessment of Shiga toxin-producing Escherichia coli (STEC)

    • Food Control
    • Publication date: May 2016
      , Volume 63

      Author(s): Christopher A. Baker, Si Hong Park, Sun Ae Kim, Peter M. Rubinelli, Stephanie M. Roto, Sang In Lee, Shawn Ramsaroop, Melinda Miller, Steven C. Ricke

      • Bacterial pathogens