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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 435

  1. Polygonum hydropiper Compound Extract Inhibits Clostridium perfringens-Induced Intestinal Inflammatory Response and Injury in Broiler Chickens by Modulating NLRP3 Inflammasome Signaling

    • Antibiotics
    • Necrotic enteritis (NE) is a critical disease affecting broiler health, with Clostridium perfringens as its primary pathogen. Polygonum hydropiper compound extract (PHCE), formulated based on traditional Chinese veterinary principles, contains primarily flavonoids with antibacterial, anti-inflammatory, and antioxidant properties. However, PHCE’s efficacy against Clostridium perfringens-induced NE and its underlying mechanism remain unclear.

      • Bacterial pathogens
      • Clostridium perfringens
  2. Occurrence of 40 sanitary indicators in French digestates derived from different anaerobic digestion processes and raw organic wastes from agricultural and urban origin

    • Frontiers in Microbiology
    • This study investigated the sanitary quality of digestates resulting from the mesophilic anaerobic digestion (AD) of urban and agricultural organic wastes (OWs). 40 sanitary indicators, including pathogenic bacteria, antimicrobial resistance genes, virulence factor genes, and mobile genetic elements were evaluated using real-time PCR and/or droplet digital PCR. 13 polycyclic aromatic hydrocarbons (PAHs) and 13 pharmaceutical products (PHPs) were also measured.

      • Bacterial pathogens
      • Bacillus cereus
      • Clostridium perfringens
  3. Broiler chicken distal jejunum microbial communities are more responsive to coccidiosis or necrotic enteritis challenge than dietary anti-interleukin-10 in a model using Salmonella Typhimurium- Eimeria maxima- Clostridium perfringens coi

    • Poultry Science
      • Bacterial pathogens
      • Clostridium perfringens
      • Salmonella
  4. Growth and no-growth boundary of Clostridium perfringens in cooked cured meats – A logistic analysis and development of critical control surfaces using a solid growth medium

    • Food Research International
    • This study was conducted to evaluate the effect of sodium nitrite (NaNO2, 100–200 ppm), sodium erythorbate (SE, 0–547 ppm), sodium tripolyphosphate (STPP, 0–0.5 %), and sodium chloride (NaCl, 2–3 %) on growth of C. perfringens using a solid growth medium and to develop a growth/no-growth boundary (critical control surface, or CCS) to prevent its growth in cooked cured meat under the optimal temperature condition.

      • Bacterial pathogens
      • Clostridium perfringens
  5. Enhancement of sausages shelf life using natural antimicrobials and propolis extract

    • Food Science and Biotechnology
    • The present work assessed the impacts of nisin (200 mg/kg) and nisin-nanoparticles (NNPs; 200 mg/kg) in combination with propolis ethanolic extract (PEE; 1% and 3%) on quality and stability of sausage during refrigerated period. The treated meat batters were mechanically stuffed into polyamide casings, packaged in vacuum conditions and analyzed at days 1, 15, 30 and 45.

      • Bacterial pathogens
      • Clostridium perfringens
      • Staphylococcus aureus
  6. Inhibition of Clostridium perfringens and Bacillus cereus by dry vinegar and cultured sugar vinegar during extended cooling of uncured beef and poultry products

    • Journal of Food Protection
    • The 2021 FSIS Stabilization Guidelines for Meat and Poultry Products (Appendix B) Option 1.2 limits Phase 1 cooling from 48.8-26.7°C in uncured meats to 1 hour. However, this time restriction is impractical to achieve in large diameter whole muscle products.

      • Bacterial pathogens
      • Bacillus cereus
      • Clostridium perfringens
  7. The Effect of Thermosonication Treatment on the Inactivation of Clostridium perfringens Spores

    • Food and Bioprocess Technology
    • Clostridium perfringens spores, which are extremely resistant and difficult to kill, can easily cause food spoilage and foodborne diseases. In this study, the effect of simultaneous ultrasound and heat (thermosonication, TS) treatment for C. perfringens spore inactivation was investigated. The TS treatment at 26.67 W/mL and 80 °C or 90 °C for 30 min resulted in 5.77 and 5.89 log inactivation of C. perfringens spores, respectively.

      • Bacterial pathogens
      • Clostridium perfringens
  8. Genetic diversity and phylogenetic relationships of Clostridium perfringens strains isolated from mastitis and enteritis in Egyptian dairy farms

    • BMC Microbiology
    • Clostridium perfringens, a common environmental bacterium, is responsible for a variety of serious illnesses including food poisoning, digestive disorders, and soft tissue infections. Mastitis in lactating cattle...

      • Bacterial pathogens
      • Clostridium perfringens
  9. 241 Immunophysiology and performance of broilers supplemented with macroalgal sulfated polysaccharides during a subclinical necrotic enteritis challenge

    • Journal of Animal Science
    • This study evaluated the effects of a sulfate polysaccharide extracted from marine algae product on performance, intestinal lesion scores, and mRNA abundance of various tight junction proteins and immune response genes.

      • Bacterial pathogens
      • Clostridium perfringens
  10. 191 Supplementing short- and medium-chain fatty acid-based products increases the health and performance of weaned piglets

    • Journal of Animal Science
    • Several feed supplements have received interest for their potential to increase growth performance and health post weaning, including alternatives to high levels of zinc oxide (ZnO) such as short- and medium-chain fatty acids (SCFA, MCFA), and phytogenics. The objective of this study is to observe the growth performance and intestinal health effects from the supplementation of SCFA with and without the addition of MCFA and phytogenics.

      • Bacterial pathogens
      • Clostridium perfringens
  11. Extract of Scutellaria baicalensis and Lonicerae flos improves growth performance, antioxidant capacity, and intestinal barrier of yellow-feather broiler chickens against Clostridium perfringens

    • Poultry Science
    • In this study, we aimed to investigate the effect of Scutellaria baicalensis and Lonicerae Flos (SL) extract on the growth performance and intestinal health of yellow-feather broilers following a Clostridium perfringens challenge.

      • Bacterial pathogens
      • Clostridium perfringens
  12. Modeling the Growth Probability of Clostridium Perfringens in Cooked Cured Meat as Affected by Sodium Chloride and Sodium Tripolyphosphate

    • Microbial Risk Analysis
    • Clostridium perfringens has been implicated in food poisoning outbreaks linked to cooked cured meat. Although there are regulatory requirements to prevent its growth during meat production, additional control measures may reduce the C. perfringens risk. This study examined the effect of sodium chloride (salt) and sodium tripolyphosphate (STPP) on the growth probability of C. perfringens in a cooked cured meat.

      • Bacterial pathogens
      • Clostridium perfringens
  13. Characterizing the formation and cross-contamination potential of multi-species biofilms in poultry processing environments: S. Enteritidis, C. jejuni and C. perfringens

    • Food Control
    • This study investigated the cross-contamination dynamics of biofilms preformed on stainless steel (SS) coupons on chicken skin and chicken meat by modeling surface-to-food transfer by contact and surface-to-food transfer in fluids. Additionally, mono-, dual-, and multi-species biofilms were examined to understand the effects of environmental conditions on biofilm-forming abilities.

      • Bacterial pathogens
      • Clostridium perfringens
  14. Effects of dietary Nisin on growth performance, immune function, and gut health of broilers challenged by Clostridium perfringens

    • Journal of Animal Science
    • Nisin (Ni) is a polypeptide bacteriocin produced by lactic streptococci (probiotics) that can inhibit the majority of gram-positive bacteria, and improve the growth performance of broilers, and exert antioxidative and anti-inflammatory properties. The present study investigated the potential preventive effect of Nisin on necrotic enteritis induced by Clostridium perfringens (Cp) challenge.

      • Bacterial pathogens
      • Clostridium perfringens
  15. Research Note: Clostridium perfringens NetB and CnaA neutralizing nanobodies in feed reduce the incidence of poultry necrotic enteritis

    • Poultry Science
    • Necrotic enteritis is a devastating disease to poultry caused by the bacterium Clostridium perfringens. As a novel approach to combating poultry necrotic enteritis, we identified and characterized several hundred single domain antibody fragments (or nanobodies) capable of binding either the NetB toxin or the collagen-binding adhesin (CnaA) of C. perfringens.

      • Bacterial pathogens
      • Clostridium perfringens
  16. Prevalence, toxin-genotype distribution, and transmission of Clostridium perfringens from the breeding and milking process of dairy farms

    • Food Microbiology
    • This study aimed to elucidate the distribution, transmission, and cross-contamination of Clostridium perfringens during the breeding and milking process from dairy farms. The prevalence of 22.3% (301/1351) yielded 494 C. perfringens isolates; all isolates were type A, except for one type D, and 69.8% (345/494) of the isolates carried atypcpb2 and only 0.6% (3/494) of the isolates carried conscpb2. C.

      • Bacterial pathogens
      • Clostridium perfringens
  17. Dietary Bacillus subtilis- and Clostridium butyricum-based probiotics supplement improves growth and meat quality, and alters microbiota in the excreta of broiler chickens

    • Canadian Journal of Animal Science
    • This study investigated the effects of the multi-probiotics consisting of Bacillus subtilis and Clostridium butyricum with varying doses (0%, 0.05%, 0.1%, and 0.2%) on the growth performance, nutrient digestibility, meat quality, and cecal microbes of male broiler chickens. Seven hundred and twenty Ross 308, 1-day-old male broiler chicks were distributed into four dietary groups.

      • Bacterial pathogens
      • Clostridium perfringens
  18. Determination of the virulence status of Clostridium perfringens strains using a chicken intestinal ligated loop model is important for understanding the pathogenesis of necrotic

    • Poultry Science
    • Necrotic enteritis (NE) is a poultry intestinal disease caused by virulent strains of the bacterium Clostridium perfringens (C. perfringens).

      • Bacterial pathogens
      • Clostridium perfringens
  19. Modulation of Broiler Intestinal Changes Induced by Clostridium perfringens and Deoxynivalenol through Probiotic, Paraprobiotic, and Postbiotic Supplementation

    • Toxins
    • Deoxynivalenol (DON) is a predisposing factor for necrotic enteritis. This study aimed to investigate the effects of a DON and Clostridium perfringens (CP) challenge on the intestinal morphology, morphometry, oxidative stress, and immune response of broilers. Additionally, we evaluated the potential of a Lactobacillus spp. mixture as an approach to mitigate the damage induced by the challenge.

      • Bacterial pathogens
      • Clostridium perfringens
      • Natural toxins
      • Mycotoxins
  20. Effect of treatment with Lactococcus lactis NZ9000 on intestinal microbiota and mucosal immune responses against Clostridium perfringens in broiler chickens

    • Frontiers in Microbiology
    • Alterations in intestinal microbiota can modulate the developing avian intestinal immune system and, subsequently, may impact on resistance to enteric pathogens. The aim was to demonstrate that early life exposure to Lactococcus lactis, could affect either susceptibility or resistance of broilers to necrotic enteritis (NE). L. lactis NZ9000 (rL.

      • Bacterial pathogens
      • Clostridium perfringens
  21. 380 The Sow Milk Microbiome and Resistome

    • Journal of Animal Science
    • In addition to oligosaccharides, proteins (e.g., immunoglobulins), lipids, vitamins, and other nutrients vital for piglet health, sow’s milk contains bacteria believed to be important in gut health. Therefore, certain sow milk isolates with potentially beneficial properties may be of interest for use as probiotic strains.

      • Bacterial pathogens
      • Clostridium perfringens
      • Staphylococcus aureus
  22. PSIII-28 A Novel Direct-Fed Microbial Supports in Vitro Intestinal Integrity Upon Clostridium Perfringens Challenge

    • Journal of Animal Science
    • Gastrointestinal pathogens cause productive, health, welfare, and financial losses to the beef cattle herd. Among these pathogens, Clostridium perfringens type A is of interest given its prevalence, negative effects on intestinal health, and subsequent losses caused in beef animals. Based on this rationale, we hypothesized that a novel direct-fed microbial (DFM) formulation would support the gut barrier integrity upon a challenge with C. perfringens type A.

      • Bacterial pathogens
      • Clostridium perfringens
  23. A Microbial Muramidase improves growth performance and reduces inflammatory cell infiltration in the intestine of broilers chickens under Eimeria and Clostridium perfringens challenge

    • Poultry Science
    • The objective of the present studies was to evaluate muramidase (MUR) supplementation in broilers under Eimeria and/or Clostridium perfringens challenge. For this, two experiments were conducted. Experiment 1. A total of 256 one-day old male Cobb 500 chicks were placed in battery cages in a completely randomized design, with 5 treatment groups, 7 replicate cages per treatment and 8 birds per cage.

      • Bacterial pathogens
      • Clostridium perfringens
  24. PSIII-9 Effects of a Specialty Energy Source on Growth Performance and Fecal Microbiota in Nursery Pigs

    • Journal of Animal Science
    • The objective of this study was to evaluate the effects of a specialty energy source, which comprises of 28% fat and 55% corn-syrup solids (Solu-E; International Ingredient Corporation, Fenton, MO) on growth performance and fecal microbiota population of nursery pigs. Two hundred and eighty-eight (initial body weight = 5.91 kg) mixed gender pigs were assigned to 4 dietary treatments in a randomized complete block design with body weight as a blocking factor.

      • Bacterial pathogens
      • Clostridium perfringens
      • Salmonella
  25. Characterization of thermostable bacteriophage CPD2 and its endolysin LysCPD2 as biocontrol agents against Clostridium perfringens

    • Food Science and Biotechnology
    • Clostridium perfringens is one of the major foodborne pathogens in humans and animals. With the prevalence of antibiotic-resistant C. perfringens strains, bacteriophages and their endolysins have received considerable attention as promising alternatives to antibiotics. In this study, C. perfringens phage CPD2 was isolated from retail chicken samples. CPD2 belongs to the Podoviridae family and exhibits remarkable thermostability.

      • Bacterial pathogens
      • Clostridium perfringens