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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 26 - 50 of 560

  1. Nigella sativaoil extract: A natural novel specific conjugal transfer inhibitor of vancomycin resistance from vanA/B Resistant Enterococcus faecium to Staphylococcus aureus

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aim The emergence of vancomycin-resistant Staphylococcus aureus (VRSA) has been identified as one of the most challenging problems in healthcare settings worldwide. Specific conjugation inhibitors development are critical in the fight against the spread of emerging VRSA.

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Predictive growth kinetic parameters and modelled probabilities of deoxynivalenol production by Fusarium graminearum on wheat during simulated storing conditions

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aims Mathematical models were employed to predict the growth kinetic parameters of F. graminearum and the accumulation of deoxynivalenol (DON) during wheat storage as a function of different moisture contents (MCs) and temperatures. Methods and results The colony counting method was used to quantify F.

      • Natural toxins
      • Mycotoxins
  3. Isolation and Characterization of Competitive Exclusion Microorganisms from Animal Wastes‐Based Composts against Listeria monocytogenes

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. To isolate the slow-growing or viable but non-culturable competitive exclusion (CE) microorganisms from composts and then verify the anti-Listeria monocytogenes activities of those CE isolates in compost. CE strains were isolated from composts using double- or triple-layer agar methods, purified, and then characterized. Both compost extracts and solid compost samples were spiked with a cocktail of 3 L.

      • Bacterial pathogens
      • Listeria monocytogenes
  4. Efficacy of EPA-registered disinfectants against two human norovirus surrogates and Clostridioides difficile endospores

    • Journal of Applied Microbiology
    • To determine the efficacy of a panel of nine EPA-registered disinfectants against two human norovirus (HuNoV) surrogates [feline calicivirus (FCV) and Tulane virus (TuV)] and Clostridioides difficile endospores. Nine EPA-registered products, five of which contained H2O2 as active ingredient, were tested against infectious FCV, TuV, and C. difficile endospores using two ASTM methods, a suspension and carrier test.

      • Viruses
  5. Animal Feed Contains Diverse Populations of Salmonella

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. In food animals, Salmonella can exist as multiserovar populations, and the goal of this study was to determine whether Salmonella-positive animal feed samples also consist of multiserovar populations. Fifty Salmonella positive samples, collected from ten countries, were cultured using three different media for Salmonella isolation: Universal pre-enrichment broth,

      • Bacterial pathogens
      • Salmonella
  6. A carvacrol‐based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. This study was conducted to test the ability of a carvacrol-based formulation (Phodé, France) to decrease the C. jejuni caecal load in inoculated broiler chickens and to study the impact of the C. jejuni inoculation alone or combined with the product, on the caecal microbiota. At day 1, chickens were either fed a control feed or the same diet supplemented with a carvacrol-based product.

      • Bacterial pathogens
      • Campylobacter
  7. Modeling the Inactivation, Survival, and Growth of Salmonella enterica under Osmotic Stress Considering Inoculum Phase and Serotype

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. This study evaluated the behaviour of the Salmonella enterica serotypes in osmotically-stressful BHI broth (0.940 ≤ aw ≤ 0.960), assessing inoculum from two stages of the bacterial life cycle (exponential and stationary) and two temperatures (25 and 35 °C). Four S.

      • Bacterial pathogens
      • Salmonella
  8. The prevalence of Campylobacter spp., Listeria monocytogenes and Shiga toxin‐producing Escherichia coli in Norwegian dairy cattle farms; a comparison between free stall and tie stall housing systems

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. This study explored how dairy farm operating systems with free-stall or tie-stall housing and cow hygiene score influence the occurrence of zoonotic bacteria in raw milk. Samples from bulk tank milk, milk filters, feces, feed, teats and teat milk were collected from eleven farms with loose housing and seven farms with tie-stall housing every second month over a period of 11 months and analyzed for the presence of STEC by culturing c

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
  9. Occult Hepatitis B virus (HBV) infection and challenges for hepatitis elimination: A literature review

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 1616-1635, March 2022. Occult hepatitis B infection (OBI) is characterized by the detection of hepatitis B virus (HBV) DNA in serum or liver but negativity for hepatitis B surface antigen. OBI, which is thought to be maintained by host, immunological, viral and/or epigenetic factors, is one of the most challenging clinical features in the study of viral hepatitis. Currently, there is no validated detection test for OBI.

      • Viruses
      • Hepatitis
  10. Detection of virulence and extended spectrum β‐lactamase genes in Salmonella by multiplex high‐resolution melt curve real‐time PCR assay

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 2355-2367, March 2022. Aims Develop and standardize multiplex high-resolution melt curve (HRM) real-time PCR assays for simultaneous detection of Salmonella virulence and extended spectrum β-lactamase (ESBL) genes in food. Methods and Results Two sets of multiplex real-time PCR assays targeting six virulence and three ESBL genes with internal amplification control were standardized.

      • Bacterial pathogens
      • Salmonella
  11. Anaerobic soil disinfestation, amendment‐type, and irrigation regimen influence Salmonella survival and die‐off in agricultural soils

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 2342-2354, March 2022. Aims This study investigated Salmonella concentrations following combinations of horticultural practices including anaerobic soil disinfestation (ASD), soil amendment type and irrigation regimen. Methods and Results Sandy-loam soil was inoculated with a five-serovar Salmonella cocktail (5.5 ± 0.2 log CFU per gram) and subjected to one of si

      • Bacterial pathogens
      • Salmonella
  12. Genotyping of enterotoxigenic methicillin‐resistant Staphylococcus aureus (MRSA) and vancomycin‐resistant Staphylococcus aureus (VRSA) among commensal rodents in North Sinai, Egypt

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 2331-2341, March 2022. Aim This study aimed to identify genotype enterotoxigenic antimicrobial-resistant Staphylococcus aureus species, mainly methicillin-resistant Saureus (MRSA) and vancomycin-resistant Saureus (VRSA) among commensal rodents. Methods and results A total of 280 samples were collected from nasal and mouth swabs

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Effectiveness of selected essential oils and one hydrolate to prevent and remove Listeria monocytogenes biofilms on polystyrene and stainless steel food‐contact surfaces

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 1866-1876, March 2022. Aims This study aimed to evaluate the effectiveness of selected essential oils (EOs) and hydrolates (Hs) against Listeria monocytogenes biofilms on polystyrene (PS) and stainless steel (SS) surfaces. Methods and Results Among others, Origanum hirtum EO, Corydothymus capitatus EO and Citrus aurantium H were selected to

      • Bacterial pathogens
      • Listeria monocytogenes
  14. Elucidating the antibiofilm activity of Frangula emodin against Staphylococcus aureus biofilms

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 1840-1855, March 2022. Aims Because the Staphylococcus aureus is one of the most well-known pathogens associated with medical devices and nosocomial infections, the aim of the study was to examine antibiofilm potential of emodin against it. Methods and Results Antibacterial activity was examined through microdilution assay.

      • Bacterial pathogens
      • Staphylococcus aureus
  15. Natural inactivation of MS2, poliovirus type 1 and Cryptosporidium parvum in an anaerobic and reduced aquifer

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 2464-2474, March 2022. Aims The study of microbial inactivation rates in aquifer systems has most often been determined in aerobic and oxidized systems. This study examined the inactivation (i.e.

      • Parasites
      • Cryptosporidium parvum
  16. The combination of thymol and cinnamaldehyde reduces the survival and virulence of Listeria monocytogenes on autoclaved chicken breast

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aims To reveal the antibacterial mechanism of the combination of thymol and cinnamaldehyde to Listeria monocytogenes ATCC 19115 on autoclaved chicken breast. Methods and Results In this study, Listeria monocytogenes ATCC 19115 on autoclaved chicken breast was exposed to the stress of 125 μg/mL thymol and 125 μg/mL cinnamaldehyde, and transcriptome analysis was used to reveal the crucial ant

      • Bacterial pathogens
      • Listeria monocytogenes
  17. Efficacy of an alcohol‐based surface disinfectant formulation against human norovirus

    • Journal of Applied Microbiology
    • Evaluate the anti-noroviral efficacy of PURELL® Surface Sanitizer and Disinfectant Spray (PSS; an alcohol-based formulation) using human norovirus GII.4 Sydney [hNoV, by RT-qPCR and human intestinal enteroid (HIE) infectivity assay] and its cultivable surrogate, Tulane virus (TuV, infectivity assay), compared to sodium hypochlorite (NaOCl) solutions. Methods and Results. PSS efficacy was evaluated in suspension and on surfaces [stainless steel (SS)] using ASTM methods.

      • Viruses
      • Norovirus
  18. Antimicrobial resistance and virulence genes in Salmonella enterica serovars isolated from droppings of layer chicken in two farms in Nigeria

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aim This study aimed to investigate the isolation rate, antibiotic resistance, and virulence genes of Salmonella enterica serovar from two commercial farms in Nigeria. Methods and Results Salmonella isolation was performed according to the United States Food and Drug Agency (USFDA) method.

      • Bacterial pathogens
      • Salmonella
  19. Global distribution of plasmid‐mediated colistin resistance mcr gene in Salmonella: A systematic review

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 872-889, February 2022. This systematic review focuses on obtaining the most relevant information from multiple studies that detected a mobilized colistin resistance mcr gene in Salmonella for a better comprehension of its global distribution.

      • Bacterial pathogens
      • Salmonella
  20. Protective efficacy of Alum adjuvanted Amidase protein vaccine against Staphylococcus aureus infection in multiple mouse models

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 1422-1434, February 2022. Aims Staphylococcus aureus is an opportunistic pathogen of humans. No commercial vaccine is available to combat S. aureus infections. In this study, we have investigated the protective immune response generated by S.

      • Bacterial pathogens
      • Staphylococcus aureus
  21. Optimized methods for detecting Salmonella Typhi in the environment using validated field sampling, culture and confirmatory molecular approaches

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 1503-1517, February 2022. This study evaluated detection methods for Salmonella Typhi (S.

      • Bacterial pathogens
      • Salmonella
  22. Prevalence and molecular characterization of Listeria monocytogenes isolated from wastewater of cattle slaughterhouses in Turkey

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 1518-1525, February 2022. Aim The study aimed to investigate the role of cattle slaughterhouse wastewater as a possible source for the environmental distribution of Listeria monocytogenes. Methods and Results Listeria spp. isolation was performed by collecting 117 wastewater samples from four different cattle slaughterhouses in Turkey.

      • Bacterial pathogens
      • Listeria monocytogenes
  23. Competitive growth kinetics of Campylobacter jejuni, Escherichia coli O157:H7 and Listeria monocytogenes with enteric microflora in a small‐intestine model

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 1467-1478, February 2022. Aims The biological events occurring during human digestion help to understand the mechanisms underlying the dose–response relationships of enteric bacterial pathogens.

      • Bacterial pathogens
      • Campylobacter
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
  24. Fate and mitigation of Salmonella contaminated in lettuce (Lactuca sativa) seeds grown in a hydroponic system

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 1449-1456, February 2022. Aims We investigated the fate of Salmonella in lettuce seeds grown in a hydroponic system and the potentials of applying photodynamic inactivation (PDI) to enhance microbial safety of hydroponic farming systems. Methods and Results Lettuce was grown from Salmonella-contaminated seeds, and rose bengal-mediated PDI was applied.

      • Bacterial pathogens
      • Salmonella
  25. Impact of parasitism on levels of human‐pathogenic Vibrio species in eastern oysters

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 2, Page 760-771, February 2022. Aims To investigate the relationships between individual health status of oysters, particularly with regard to parasitic infection, and variability in abundance of human-pathogenic Vibrio species. Methods and Results Aquacultured eastern oysters, Crassostrea virginica, were analysed individually for infection by the protozoan parasite Perkinsus marin

      • Bacterial pathogens
      • Vibrio