DETECTION AND TRACKING SYSTEM FOR BACTERIAL THREATS TO POTATO AND VEGETABLE INDUSTRIES

The goal of this project is to construct a genome database, including all type and reference strains from different geographical locations, and establish a pipeline that can use this database to accurately detect and identify the SRP in a sample.The specific objectives of this proposal are: 1) develop a genome database for SRPs to enhance capabilities for rapid detection and strain tracking; and 2) validation of "BacPath" pipeline for robust detection and differentiation of SRPs.The long-term goal of this research project is to develop a robust and highly accurate genome database and pipeline for plant pathogens to support farmers, seed producers, stakeholders, and government agencies.