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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 41468

  1. Unveiling the gut bacteriome diversity and distribution in the national fish hilsa (Tenualosa ilisha) of Bangladesh

    • PLOS ONE
    • by A. Q. M. Robiul Kawser, M. Nazmul Hoque, M. Shaminur Rahman, Tahsin Islam Sakif, Tracey J. Coffey, Tofazzal Islam

      • Bacterial pathogens
      • Shigella
      • Staphylococcus aureus
  2. Assessment of fish protein hydrolysate as a substitute for fish meal in white shrimp diets: Impact on growth, immune response, and resistance against Vibrio parahaemolyticus infection

    • Fish & Shellfish Immunology
      • Bacterial pathogens
      • Vibrio
  3. Staphylococcus aureus isolated from traditional artisanal raw milk cheese from southern Brazil: diversity, virulence, and antimicrobial resistance profile

    • Journal of Food Protection
      • Bacterial pathogens
      • Staphylococcus aureus
  4. Extract of Scutellaria baicalensis and Lonicerae flos improves growth performance, antioxidant capacity, and intestinal barrier of yellow-feather broiler chickens against Clostridium perfringens

    • Poultry Science
      • Bacterial pathogens
      • Clostridium perfringens
  5. Identification and classification of the genomes of novel microviruses in poultry slaughterhouse

    • Frontiers in Microbiology
    • Microviridae is a family of phages with circular ssDNA genomes and they are widely found in various environments and organisms. In this study, virome techniques were employed to explore potential members of Microviridae in a poultry slaughterhouse, leading to the identification of 98 novel and complete microvirus genomes.

      • Bacterial pathogens
      • Vibrio
  6. Understanding phloem's role in long-distance transport and accumulation of arsenic (As) in rice: toward low-As-accumulating grain development

    • Planta
    • Abstract


      Main conclusion

      This review highlights the roles of phloem in the long-distance transport and accumulation of As in rice plants, facilitating the formulation of new strategies to reduce the grain As content.


      • Chemical contaminants
      • Heavy Metals
  7. Whole-Genome Sequencing-Based Confirmatory Methods on RT-qPCR Results for the Detection of Foodborne Viruses in Frozen Berries

    • Food and Environmental Virology
    • Accurate detection, identification, and subsequent confirmation of pathogens causing foodborne illness are essential for the prevention and investigation of foodborne outbreaks. This is particularly true when the causative agent is an enteric virus that has a very low infectious dose and is likely to be present at or near the limit of detection.

      • Viruses
      • Hepatitis
      • Norovirus
  8. Mitigating cadmium contamination in rice: insights from a large-scale meta-analysis of amendment effects

    • Plant and Soil
    • Abstract


      Background and aims

      Cadmium (Cd) pollution in rice is a health hazard. to humans. Amendments often decreases soil Cd bioavailability and Cd accumulation in rice plants. However, a complete and quantitative understanding of the effects of soil amendment on soil properties, Cd availability, rice yield, and Cd accumulation in rice is lacking.

      • Chemical contaminants
      • Heavy Metals
  9. Multistate outbreaks of salmonellosis linked to contact with backyard poultry—United States, 2015–2022

    • Zoonoses and Public Health
    • Abstract Aims Contact with backyard poultry (i.e., privately‐owned, non‐commercial poultry) was first associated with a multistate outbreak of salmonellosis in 1955. In recent years, backyard poultry‐associated salmonellosis outbreaks have caused more illnesses in the United States than salmonellosis outbreaks linked to any other type of animal. Here, we describe the epidemiology of outbreaks from 2015–2022 to inform prevention efforts.

      • Bacterial pathogens
      • Salmonella
  10. Conspicuous chloroplast with light harvesting-photosystem I/II megacomplex in marine Prorocentrum cordatum

    • Plant Physiology
    • Marine photosynthetic (micro)organisms drive multiple biogeochemical cycles and display a large diversity. Among them, the bloom-forming, free-living dinoflagellate Prorocentrum cordatum CCMP 1329 (formerly P. minimum) stands out with its distinct cell biological features. Here, we obtained insights into the structural properties of the chloroplast and the photosynthetic machinery of P. cordatum using microscopic and proteogenomic approaches.

      • Natural toxins
      • Shellfish toxins
  11. Biochar Application Method and Amount Both Changed the Dynamics of Soil Temperature-Moisture-Metals in an Acidic Inceptisols

    • Water, Air, & Soil Pollution
    • The biochar was derived from four feedstocks: buckwheat straw, rice straw, mustard stover, and soybean stover. The results showed that, with increase in biochar application rate the soil temperature increased significantly in both 0–15 and 15–30 cm soil depth. The soil temperature decreased with increase in soil depth after different feedstock derived biochar application.

      • Chemical contaminants
      • Heavy Metals
  12. Environmental Factors Modulate Saxitoxins (STXs) Production in Toxic Dinoflagellate Alexandrium: An Updated Review of STXs and Synthesis Gene Aspects

    • Toxins
    • The marine dinoflagellate Alexandrium is known to form harmful algal blooms (HABs) and produces saxitoxin (STX) and its derivatives (STXs) that cause paralytic shellfish poisoning (PSP) in humans. Cell growth and cellular metabolism are affected by environmental conditions, including nutrients, temperature, light, and the salinity of aquatic systems.

      • Natural toxins
      • Shellfish toxins
  13. Bacitracin Methylene Disalicylate (BMD) Treatment Affects Spleen Proteome in Broiler Chicks Infected with Salmonella enteritidis

    • Antibiotics
    • Bacitracin Methylene Disalicylate (BMD), as a feed additive to poultry diets, enhances digestion, prevents Salmonella enteritidis (SE) colonization, and treats current infections. The objective of this study was to utilize a quantitative proteomic approach to determine the effect of BMD feed additive on broiler chickens challenged with SE in the spleen proteome.

      • Bacterial pathogens
      • Salmonella
  14. Applications of high‐intensity ultrasound on shrimp: Potential, constraints, and prospects in the extraction and retrieval of bioactive compounds, safety, and quality

    • Journal of Food Science
    • Abstract The global shrimp market holds substantial prominence within the food industry, registering a significant USD 24.7 billion in worldwide exportation in 2020. However, the production of a safe and high‐quality product requires consideration of various factors, including the potential for allergenic reactions, occurrences of foodborne outbreaks, and risks of spoilage.

      • Bacterial pathogens
      • Vibrio
  15. Draft genome sequences of 13 Salmonella enterica subsp. enterica isolates from chickens, cows, and Canadian Salmonella outbreaks

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Salmonella enterica is the etiological agent responsible for salmonellosis. Here, we report the draft whole genome sequences of 13 S. enterica subsp. enterica isolates from chickens and cows, as well as from previous Canadian Salmonella outbreaks investigated by the Canadian Food Inspection Agency.
       

      • Bacterial pathogens
      • Salmonella
  16. The Genetic Landscape of Antimicrobial Resistance Genes in Enterococcus cecorum Broiler Isolates

    • Antibiotics
    • Enterococcus cecorum is associated with bacterial chondronecrosis with osteomyelitis (BCO) in broilers. Prophylactic treatment with antimicrobials is common in the poultry industry, and, in the case of outbreaks, antimicrobial treatment is needed. In this study, the minimum inhibitory concentrations (MICs) and epidemiological cutoff (ECOFF) values (COWT) for ten antimicrobials were determined in a collection of E. cecorum strains.

      • Chemical contaminants
      • Dioxins
  17. The effectiveness of various biochar types in enhancing the phytoremediation of soils polluted with petroleum hydrocarbon

    • Journal of Plant Nutrition and Soil Science
    • Abstract Background Biochar can enhance phytoremediation in petroleum hydrocarbon polluted soils, making it an intriguing soil amendment option for remediating polluted soil. Biochar can improve the fertility of depleted soils through a range of mechanisms. This study can contribute valuable insights into the origin of biochar and enhance our understanding of the efficacy of different biochar types in remediating petroleum hydrocarbon polluted soils.

      • Chemical contaminants
      • Heavy Metals
  18. Immune signaling of Litopenaeus vannamei c-type lysozyme and its role during microsporidian Enterocytozoon hepatopenaei (EHP) infection

    • PLOS Pathogens
    • by Nutthapon Sangklai, Premruethai Supungul, Pattana Jaroenlak, Anchalee Tassanakajon The microsporidian Enterocytozoon hepatopenaei (EHP) is a fungi-related, spore-forming parasite. EHP infection causes growth retardation and size variation in shrimp, resulting in severe economic losses. Studies on shrimp immune response have shown that several antimicrobial peptides (AMPs) were upregulated upon EHP infection.

      • Bacterial pathogens
      • Vibrio
  19. Genome-based surveillance reveals cross-transmission of MRSA ST59 between humans and retail livestock products in Hanzhong, China

    • Frontiers in Microbiology
    • Methicillin-resistant Staphylococcus aureus (MRSA) has been recognized in hospitals, community and livestock animals and the epidemiology of MRSA is undergoing a major evolution among humans and animals in the last decade. This study investigated the prevalence of MRSA isolates from ground pork, retail whole chicken, and patient samples in Hanzhong, China.

      • Bacterial pathogens
      • Staphylococcus aureus
  20. Redefining food safety: the confluence of Web 3.0 and AI technologies in the meat supply chain—a systematic review

    • International Journal of Food Science & Technology
    • A systematic review of the use of Web 3.0 and Ai technologies in the meat supply chain. Summary Web 3.0 and artificial intelligence (AI) have presented unprecedent impact on the food sector. However, there is no clear scientific description yet related to their influences on food safety, quality and traceability across the meat supply chain.

      • Produce Safety
      • Pre Harvest
  21. Comprehensive insights into antibiotic residues in livestock products: Distribution, factors, challenges, opportunities, and implications for food safety and public health

    • Food Control
    • From a public health point of view, antimicrobial residues pose various problems, including potential risks for consumers. The use of some of these antibiotics may affect the form and quality of animal products or affect the quality or output of food processing. Consequently, there is a pressing need for further investigation into the effects of antibiotics on animal products.

      • Chemical contaminants
      • Antibiotic residues
  22. Harnessing probiotics capability to combat Salmonella Heidelberg and improve intestinal health in broilers

    • Poultry Science
    • The poultry industry faces significant challenges in controlling Salmonella contamination while reducing antibiotic use, particularly with the emergence of Salmonella Heidelberg (SH) strains posing risks to food safety and public health.

      • Bacterial pathogens
      • Salmonella
  23. A case of paralytic shellfish poisoning caused by consumption of visceral balls from geoduck Panopea japonica in Japan

    • Toxicon
      • Natural toxins
      • Shellfish toxins
  24. Assessment of mycobiota in Thai pigmented rice: Insights into ochratoxin A and citrinin production by Aspergillus and Penicillium species

    • Journal of Stored Products Research
      • Natural toxins
      • Mycotoxins
  25. A method for estimating the outer exposure of dairy cows to deoxynivalenol (DON) and zearalenone (ZEN) as a precondition for risk assessment based on inner exposure with toxin residue levels in blood and urine as indicators

    • Mycotoxin Research
    • DON and ZEN residues in the blood and urine of dairy cows can be used to predict the outer exposure to DON and ZEN expressed per kilogram diet for a risk evaluation based on comparisons to critical dietary concentrations. This method was used to evaluate the exposure of dairy cows from 12 farms located in Brandenburg, Germany, fed rations with unknown DON and ZEN concentrations (N = 244).

      • Natural toxins
      • Mycotoxins