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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 26 - 50 of 667

  1. Detection of hepatitis E RNA in pork products at point of retail in Ireland – Are consumers at risk?

    • International Journal of Food Microbiology
    • Hepatitis E (HEV), a zoonotic virus, is the leading cause of acute viral hepatitis in Europe. The presence of HEV in domestic pigs can result in infections in humans through consumption of pork products which are undercooked or where processing methods are insufficient to inactivate the virus.

      • Viruses
      • Hepatitis
  2. Increased fecal ethanol and enriched ethanol-producing gut bacteria Limosilactobacillus fermentum, Enterocloster bolteae, Mediterraneibacter gnavus and Streptococcus mutans in nonalcoholic steatohepatitis

    • Frontiers in Cellular and Infection Microbiology
    • Background Non-alcoholic steatohepatitis (NASH) has become a major public health issue as one of the leading causes of liver disease and transplantation worldwide. The instrumental role of the gut microbiota is emerging but still under investigation. Endogenous ethanol (EtOH) production by gut bacteria and yeasts is an emerging putative mechanism.

      • Viruses
      • Hepatitis
  3. Assessment of the Adverse Health Effects of Aflatoxin Exposure from Unpackaged Peanut Oil in Guangdong, China

    • Toxins
    • Aflatoxins are liver carcinogens and are common contaminants in unpackaged peanut (UPP) oil. However, the health risks associated with consuming aflatoxins in UPP oil remain unclear. In this study, aflatoxin contamination in 143 UPP oil samples from Guangdong Province were assessed via liquid chromatography–tandem mass spectrometry (LC-MS). We also recruited 168 human subjects, who consumed this oil, to measure their liver functions and lipid metabolism status.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
      • Viruses
      • Hepatitis
  4. Convergent application of traditional Chinese medicine and gut microbiota in ameliorate of cirrhosis: a data mining and Mendelian randomization study

    • Frontiers in Cellular and Infection Microbiology
    • Objective Traditional Chinese medicine (TCM) has been used for the treatment of chronic liver diseases for a long time, with proven safety and efficacy in clinical settings. Previous studies suggest that the therapeutic mechanism of TCM for hepatitis B cirrhosis may involve the gut microbiota. Nevertheless, the causal relationship between the gut microbiota, which is closely linked to TCM, and cirrhosis remains unknown.

      • Viruses
      • Hepatitis
  5. Metabarcoding of Hepatitis E Virus Genotype 3 and Norovirus GII from Wastewater Samples in England Using Nanopore Sequencing

    • Food and Environmental Virology
    • Norovirus is one of the largest causes of gastroenteritis worldwide, and Hepatitis E virus (HEV) is an emerging pathogen that has become the most dominant cause of acute viral hepatitis in recent years. The presence of norovirus and HEV has been reported within wastewater in many countries previously. Here we used amplicon deep sequencing (metabarcoding) to identify norovirus and HEV strains in wastewater samples from England collected in 2019 and 2020.

      • Viruses
      • Hepatitis
      • Norovirus
  6. Construction and immune evaluation of the recombinant duck adenovirus type 3 delivering capsid protein VP1 of the type 1 duck hepatitis virus

    • Poultry Science
    • Adenovirus serves as an excellent viral vector and is employed in vector vaccine research. Duck hepatitis A virus type 1 (DHAV1) and duck adenovirus type 3 (DAdV3) cause significant economic losses in the Chinese duck industry.

      • Viruses
      • Hepatitis
  7. Navigating the UKAS Accreditation Process for Detecting Norovirus and Hepatitis A Virus in Fresh and Frozen Produce: a Case Study

    • Food Analytical Methods
    • Given the urgent requirement for more laboratories to develop proficiency in detecting foodborne viruses, this case study charts the path to accreditation, demystifying the process of validating a method for detecting norovirus and hepatitis A virus in fresh produce. Securing accreditation is crucial to ensuring dependable and precise food analysis, particularly relevant for products frequently consumed raw, which are at risk of contamination by foodborne viruses.

      • Viruses
      • Hepatitis
      • Norovirus
  8. Hepatitis E virus neutralization by porcine serum antibodies

    • Journal of Clinical Microbiology
    • Journal of Clinical Microbiology, Ahead of Print. The consumption of raw or undercooked meat products poses a serious risk for human hepatitis E virus (HEV) infections. In many high-income countries, domestic pigs and wild boars represent the main animal reservoirs for HEV and are usually identified by reverse transcription-PCR and antibody enzyme-linked immunosorbent assay (ELISA).

      • Viruses
      • Hepatitis
  9. Prevalence of hepatitis E virus genotype 4 of probable human origin in Tibetan pigs from the Qinghai‐Tibetan Plateau, China

    • Zoonoses and Public Health
    • Abstract Hepatitis E virus (HEV) is the most common cause of acute viral hepatitis worldwide. In 2018–2022, we investigated the presence of HEV RNA in 1233 stool samples collected in the Qinghai‐Tibetan Plateau, including humans (16), Tibetan pigs (624), yaks (312), sheep (267), and dogs (14). HEV RNA was only detected in Tibetan pig faecal samples (18.27%, 114/624).

      • Viruses
      • Hepatitis
  10. A novel formula used for predicting hepatocellular carcinoma after the achievement of sustained virologic response by direct-acting antivirals in patients with chronic hepatitis C

    • PLOS ONE
    • by Yuji Yoshida, Masanori Atsukawa, Chisa Kondo, Michika Kitamura, Kaori Shioda-Koyano, Tadamichi Kawano, Hiroki Ono, Korenobu Hayama, Tomomi Okubo, Taeang Arai, Norio Itokawa, Katsuhiko Iwakiri Although eliminating HCV can prevent hepatocellular carcinoma (HCC), some patients develop HCC even after obtaining sustained virologic response (SVR). Previously, we developed a new formula to predict advanced liver fibrosis.

      • Viruses
      • Hepatitis
  11. Detection of Hepatitis E Virus in Rabbits and Rabbit Meat from Slaughterhouses in Hebei Province of China

    • Vector-Borne and Zoonotic Diseases
    • Background: Hepatitis E virus (HEV) is a zoonotic pathogen. HEV has been found to be widely prevalent in rabbits. Its isolates are classified into HEV-3, rabbit subgenotype (HEV-3ra). The routes of human infection with HEV-3ra remain unclear; however, foodborne transmission is possible when asymptomatically infected animals enter the food chain. The prevalence of HEV infection in slaughtered rabbits and the presence of HEV in rabbit meat were evaluated in this study.

      • Viruses
      • Hepatitis
  12. First Seroepidemiological Investigation of Hepatitis E Virus Infection in Backyard Pigs from Northeastern India: Prevalence and Associated Risk Factors

    • Food and Environmental Virology
    • Hepatitis E virus (HEV) is the leading cause of acute viral hepatitis globally, with zoonotic potential, and pigs are considered the major reservoir. To determine the seroprevalence of HEV infection in pigs reared in backyard conditions in the northeastern region of India, blood samples were collected from 400 pigs from five northeastern states (80 samples from each state) and tested for IgG antibodies against HEV using an ELISA assay.

      • Viruses
      • Hepatitis
  13. Co-circulation of Hepatitis E Virus (HEV) Genotype 3 and Moose-HEV-Like Strains in Free-Ranging-Spotted Deer (Axis axis) in Uruguay

    • Food and Environmental Virology
    • Hepatitis E caused by hepatitis E virus (HEV) is considered an emerging foodborne zoonosis in industrialized, non-endemic countries. Domestic pigs and wild boars are considered the main reservoir of HEV. However, HEV can also infect an ever-expanding host range of animals, but they exact role in transmitting the virus to other species or humans is mostly unknown.

      • Viruses
      • Hepatitis
  14. Effects of coenzyme Q10 and N-acetylcysteine on experimental poisoning by paracetamol in Wistar rats

    • PLOS ONE
    • by Rayanne Henrique Santana da Silva, Mariana de Moura, Larissa de Paula, Kelly Carolina Arantes, Marina da Silva, Jaqueline de Amorim, Marina Pacheco Miguel, Danieli Brolo Martins, Daniela de Melo e Silva, Marília Martins Melo, Ana Flávia Machado Botelho Paracetamol (PAR) is a drug widely used in human and veterinary medicine as an analgesic and antipyretic, often involved in cases of intoxication.

      • Viruses
      • Hepatitis
  15. Rapid identification of chemical constituents in Hugan tablets by ultra‐performance liquid chromatography‐quadrupole‐exactive orbitrap mass spectrometry

    • Journal of Separation Science
    • Hugan tablet is a Chinese medicine preparation. It is composed of Bupleuri Radix, Artemisiae Scopariae Herba, Isatidis Radix, Schisandrae Chinensis Fructus, Suis Fellis Pulvis, and Vigna radiata L. It has the effects of dispersing stagnated liver qi, strengthening the spleen and eliminating food to be used for the treatment of chronic hepatitis and early cirrhosis.

      • Viruses
      • Hepatitis
  16. Screen the unforeseen: Microbiome‐profiling for detection of zoonotic pathogens in wild rats

    • Transboundary and Emerging Diseases
    • Abstract Wild rats can host various zoonotic pathogens. Detection of these pathogens is commonly performed using molecular techniques targeting one or a few specific pathogens. However, this specific way of surveillance could lead to (emerging) zoonotic pathogens staying unnoticed. This problem may be overcome by using broader microbiome‐profiling techniques, which enable broad screening of a sample's bacterial or viral composition.

      • Viruses
      • Hepatitis
  17. First Detection and Characterization of Hepatitis E Virus in Sewage Samples in Cameroon

    • Food and Environmental Virology
    • Hepatitis E virus (HEV) represents an important public health concern in many developing countries, including Africa. Transmission of HEV to humans by contaminated drinking water is the most important mode of transmission in low- and middle-income countries. This study aimed to assess the presence of HEV in the environment in Cameroon through molecular analysis of sewage samples.

      • Viruses
      • Hepatitis
  18. Detection of Hepatitis A RNA, Hepatitis E RNA, Human Adenovirus F DNA, and Norovirus RNA in Fresh and Frozen Berry Products at Point of Retail in Ireland

    • Food and Environmental Virology
    • Soft fruits are at particular risk of contamination with enteric viruses such as Hepatitis A virus (HAV), Hepatitis E Virus (HEV), Norovirus (NoV), Human Adenovirus (HAdV) and Sapovirus (SaV). The aim of this study was to investigate, for the first time, the presence of these biological agents in ready to eat (RTE) berries at point of retail in Ireland.

      • Viruses
      • Hepatitis
      • Norovirus
  19. Thrombin cleavage of the hepatitis E virus polyprotein at multiple conserved locations is required for genome replication

    • PLOS Pathogens
    • by Danielle M. Pierce, Frazer J. T. Buchanan, Fraser L. Macrae, Jake T. Mills, Abigail Cox, Khadijah M. Abualsaoud, Joseph C. Ward, Robert A. S. Ariëns, Mark Harris, Nicola J. Stonehouse, Morgan R. Herod The genomes of positive-sense RNA viruses encode polyproteins that are essential for mediating viral replication. These viral polyproteins must undergo proteolysis (also termed polyprotein processing) to generate functional protein units.

      • Viruses
      • Hepatitis
  20. Synergistic effects of sequential treatment using disinfectant and e-beam for inactivation of hepatitis a virus on fresh vegetables

    • Food Research International
    • Hepatitis A virus (HAV) has adversely affected public health worldwide, causing an economic burden on many countries. Fresh vegetables are reported as a source of HAV infections during production, harvesting, and distribution, which cause the emergence of foodborne illnesses.

      • Viruses
      • Hepatitis
  21. Comparative genomic analysis of Campylobacter hepaticus genomes associated with spotty liver disease, Georgia, United States

    • Frontiers in Microbiology
    • Campylobacter hepaticus has re-emerged as an important cause of disease in egg laying birds worldwide, resulting in morbidity, mortality, and significant losses in eggs for the breeding and table egg laying industries. Although birds may appear asymptomatic, the disease is characterized by spots on the liver of birds and histopathological analysis reveals multifocal fibrogranulocytic necrotizing hepatitis microscopically. The re-emergence of C.

      • Bacterial pathogens
      • Campylobacter
      • Viruses
      • Hepatitis
  22. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  23. The effect of subacute co-exposure to carbon tetrachloride and diclofenac on the liver of male wistar rats

    • Toxicology and Industrial Health
    • Carbon tetrachloride (CCl4) is a potent liver toxin. Diclofenac (Dic), leading adverse effects on the liver, is used among the employees of the industries that use CCl4. The increased use of CCl4 and Dic in industrial workers has prompted us to investigate their synergistic effect on the liver using male Wistar rats as a model. Male Wistar rats were divided into seven groups (n = 6), and the exposure was by intraperitoneal injection for 14 days as follows.

      • Viruses
      • Hepatitis
  24. Landscapes of gut microbiome and bile acid signatures and their interaction in HBV-associated acute-on-chronic liver failure

    • Frontiers in Microbiology
    • Introduction

      Submassive hepatic necrosis (SMHN, defined as necrosis of 15–90% of the entire liver on explant) is a likely characteristic pathological feature of ACLF in patients with hepatitis B cirrhosis. We aimed to comprehensively explore microbiome and bile acids patterns across enterhepatic circulation and build well-performing machine learning models to predict SMHN status.

      Methods

      • Viruses
      • Hepatitis
  25. Inactivation of foodborne viruses by novel organic peroxyacid-based disinfectants

    • Frontiers in Microbiology
    • Viruses are responsible for most enteric foodborne illnesses worldwide. The foods most frequently involved are fresh fruits and vegetables since they undergo little or no processing. Washing with a chemical disinfectant is a convenient way of inactivating viruses on foods. Peracetic acid, widely used as a disinfectant in the food industry, has the drawback of leaving a strong odor and is ineffective alone against some foodborne viruses.

      • Viruses
      • Hepatitis
      • Norovirus