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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 251 - 275 of 721

  1. Genomic Modeling as an Approach to Identify Surrogates for Use in Experimental Validation of SARS-CoV-2 and HuNoV Inactivation by UV-C Treatment

    • Frontiers in Microbiology
    • Severe Acute Respiratory Syndrome coronavirus-2 (SARS-CoV-2) is responsible for the COVID-19 pandemic that continues to pose significant public health concerns. While research to deliver vaccines and antivirals are being pursued, various effective technologies to control its environmental spread are also being targeted. Ultraviolet light (UV-C) technologies are effective against a broad spectrum of microorganisms when used even on large surface areas.

      • Norovirus
      • Hepatitis
      • Viruses
  2. Epidemiology and Genetic Characterization of Classical Human Astrovirus Infection in Shanghai, 2015–2016

    • Frontiers in Microbiology
    • Objective

      • Viruses
      • Norovirus
  3. Efficacy of alcohol‐based hand sanitizers against human norovirus using RNase‐RT‐qPCR with validation by human intestinal enteroid replication

    • Letters in Applied Microbiology
    • Successful human norovirus (HuNoV) cultivation in stem cell‐derived human intestinal enteroids (HIE) was recently reported. The purpose of this study was to evaluate the anti‐HuNoV efficacy of two alcohol‐based commercial hand sanitizers and 60% ethanol by suspension assay using RNase‐RT‐qPCR, with subsequent validation of efficacy by HuNoV cultivation using the HIE model.

      • Viruses
      • Norovirus
  4. Virucidal activity of three ethanol-based handrubs against murine norovirus in a hand hygiene clinical simulation study

    • Future Microbiology
    • Aim: We evaluated the efficacy of three ethanol-based hand rubs against murine norovirus in a proposed clinical simulation test (prEN 17430). Materials & methods: Virucidal activity was determined in 18 volunteers using three hand rubs: ethanol 72.4 and 89.5% v/v solutions, and 86% v/v gel. Subjects underwent testing with each product (3/6 ml for 15/30 s) and a reference solution (6 ml 70% v/v ethanol for 60 s).

      • Norovirus
      • Viruses
  5. Human norovirus exhibits strain-specific sensitivity to host interferon pathways in human intestinal enteroids

    • Proceedings of the National Academy of Sciences
    • Human noroviruses (HuNoVs) are the leading cause of viral gastroenteritis worldwide; yet currently, no vaccines or FDA-approved antiviral drugs are available to counter these pathogens. To understand HuNoV biology and the epithelial response to infection, we performed transcriptomic analyses, RT-qPCR, CRISPR-Cas9 modification of human intestinal enteroid (HIE) cultures, and functional...

      • Norovirus
      • Viruses
  6. Evaluating appropriateness and diagnostic stewardship opportunities of multiplex polymerase chain reaction gastrointestinal testing within a hospital system

    • Therapeutic Advances in Infectious Disease
    • Objective:This single-center, retrospective, observational cohort study evaluates the appropriateness of the BioFire® FilmArray® Gastrointestinal (GI) multiplex PCR panel testing at a community-teaching hospital.Methods:All adult, hospitalized patients at Prisma Health Richland Hospital with a documented GI multiplex PCR panel from 1 April 2015 through 28 February 2018 were included in the analysis.

      • Norovirus
      • Viruses
      • Bacterial pathogens
  7. The Basis of Peracetic Acid Inactivation Mechanisms for Rotavirus and Tulane Virus under Conditions Relevant for Vegetable Sanitation

    • Applied and Environmental Microbiology
    • We determined the disinfection efficacy and inactivation mechanisms of peracetic acid (PAA)-based sanitizer using pH values relevant for vegetable sanitation against rotavirus (RV) and Tulane virus (TV; a human norovirus surrogate). TV was significantly more resistant to PAA disinfection than RV: for a 2-log10 reduction of virus titer, RV required 1 mg/liter PAA for 3.5 min of exposure, while TV required 10 mg/liter PAA for 30 min.

      • Viruses
      • Norovirus
  8. Phylogenetic and biological characterizations of a GI.3 norovirus

    • Infection, Genetics and Evolution
    • Author(s): Lijun Zheng, Hanming Zhang, Jie Ma, Jinjin Liu, Shuhuan Ma, Mingchen Wang, Yuqi Huo

      • Viruses
      • Norovirus
  9. Thermal Inactivation of Hepatitis A Virus, Noroviruses, and Simian Rotavirus in Cows' Milk

    • Food and Environmental Virology
    • Consumption of raw or unpasteurized milk is a risk for the consumers because indirect contaminations such as fecal-cross-contamination could occur and determine the presence of enteric viruses.

      • Norovirus
      • Hepatitis
      • Viruses
  10. Application of an Optimized Direct Lysis Method for Viral RNA Extraction Linking Contaminated Dates to Infection With Hepatitis A Virus

    • Frontiers in Microbiology
    • Consumption of dates has not been considered a common risk of hepatitis A virus (HAV) infection. In January 2018, an outbreak of hepatitis was identified with cases resident in all regions of Denmark. All the detected strains belonged to HAV genotype 3A. Epidemiological investigations through patients’ interviews, case-control and trace-back studies pointed toward different batches of dates from a single producer as the vehicle of infection.

      • Norovirus
      • Hepatitis
      • Viruses
  11. Inactivation of hepatitis A virus and murine norovirus on surfaces of plastic, steel and raspberries using steam-ultrasound treatment

    • Food and Environmental Virology
    • The leading causes of foodborne viral disease outbreaks are human norovirus and hepatitis A virus (HAV). Their environmental persistence enables contamination of kitchen surfaces and crops often consumed raw, such as berries. Many decontamination procedures are inefficient and unsuitable for surfaces of industrial kitchen environments and soft fruits.

      • Norovirus
      • Hepatitis
      • Viruses
  12. Risk factors for sporadic norovirus infection: a systematic review and meta-analysis

    • Microbial Risk Analysis
    • Author(s): Anne Thébault, Julie David, Pauline Kooh, Vasco Cadavez, Ursula Gonzales-Barron, Nicole Pavio

      • Norovirus
      • Viruses
  13. Quantifying the Transmission of Foot-and-Mouth Disease Virus in Cattle via a Contaminated Environment

    • mBio
    • ABSTRACT

      • Viruses
      • Norovirus
  14. Research Paper:Attributing human foodborne diseases to food sources and water in Japan using analysis of outbreak surveillance data

    • Journal of Food Protection
    • In Japan, strategies for ensuring food safety have been developed without reliable scientific evidence on the relation between foodborne infections and foods. The aim of this research was to provide information on the proportions of foodborne diseases caused by seven major causative pathogens ( Campylobacte r spp., Salmonella spp., EHEC, V. parahaemolyticus , Clostridium perfringens , Staphylococcus aureus , and Norovirus) attributable to foods using analysis of outbreak surveillance data.

      • Produce Safety
      • Vibrio
      • Staphylococcus aureus
      • Bacterial pathogens
      • Campylobacter
      • Clostridium perfringens
      • Norovirus
      • Salmonella
      • Viruses
  15. Impact of pH and protein hydrophobicity on norovirus inactivation by heat-denatured lysozyme

    • PLOS ONE
    • by Michiko Takahashi, Hajime Takahashi, Yumiko Okakura, Masahiro Ichikawa, Takashi Kuda, Bon Kimura

      • Norovirus
      • Viruses
  16. Human norovirus disease burden of consuming Crassostrea gigas oysters: A case-study from Japan

    • Food Control
    • Author(s): Yo Ueki, Mohan Amarasiri, Sayaka Kamio, Akie Sakagami, Hiroshi Ito, Sital Uprety, Arief Nurul Umam, Takayuki Miura, Thanh H. Nguyen, Daisuke Sano

      • Norovirus
      • Viruses
  17. A Somatic Coliphage Threshold Approach To Improve the Management of Activated Sludge Wastewater Treatment Plant Effluents in Resource-Limited Regions

    • Applied and Environmental Microbiology
    • Effective wastewater management is crucial to ensure the safety of water reuse projects and effluent discharge into surface waters. Multiple studies have demonstrated that municipal wastewater treatment with conventional activated sludge processes is inefficient for the removal of a wide spectrum of viruses in sewage.

      • Norovirus
      • Hepatitis
      • Viruses
  18. Human Intestinal Enteroids to Evaluate Human Norovirus GII.4 Inactivation by Aged-Green Tea

    • Frontiers in Microbiology
    • Human noroviruses are the leading cause of epidemic and sporadic acute gastroenteritis worldwide and the most common cause of foodborne illness in the United States. Several natural compounds, such as aged-green tea extract (aged-GTE), have been suggested as ingestible antiviral agents against human norovirus based on data using murine norovirus and feline calicivirus as surrogates. However, in vitro data showing their effectiveness against infectious human norovirus are lacking.

      • Norovirus
      • Viruses
  19. Gut Microbiota Features Associated With Campylobacter Burden and Postnatal Linear Growth Deficits in a Peruvian Birth Cohort

    • Clinical Infectious Diseases
    • Background Campylobacter infection is associated with impaired growth of children, even in the absence of symptoms. To examine the underlying mechanisms, we evaluated associations between Campylobacter infection, linear growth, and fecal microbial community features in a prospective birth cohort of 271 children with a high burden of diarrhea and stunting in the Amazonian lowlands of Peru.

      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Campylobacter
      • Norovirus
  20. Assessment of the microbiological quality of natural mineral waters according to the manufacturing time of 20 L returnable packs in Brazil

    • FEMS Microbiology Letters
    • ABSTRACT This study aimed to assess the microbiological quality of natural mineral waters commercialized in 20 L returnable packs in Brazil by investigating the presence of bacteria and viruses in packs with different manufacturing times (Tm). With this purpose, 99 water samples from 33 lots (n = 3/batch) of 15 brands, obtained from packs with three intervals of Tm, were analyzed.

      • Bacterial pathogens
      • Viruses
      • Norovirus
  21. Evolutionary and Molecular Analysis of Complete Genome Sequences of Norovirus From Brazil: Emerging Recombinant Strain GII.P16/GII.4

    • Frontiers in Microbiology
    • Noroviruses (NoVs) are enteric viruses that cause acute gastroenteritis, and the pandemic GII.4 genotype is spreading and evolving rapidly. The recombinant GII.P16/GII.4_Sydney strain emerged in 2016, replacing GII.P31/GII.4_Sydney (GII.P31 formerly known as GII.Pe) in some countries. We analyzed the complete genome of 20 NoV strains (17 GII.P31/GII.4_ Sydney and 3 GII.P16/GII.4_Sydney) from Belém and Manaus, Brazil, collected from 2012 to 2016.

      • Viruses
      • Norovirus
  22. Energy Requirements for Loss of Viral Infectivity

    • Food and Environmental Virology
    • Outside the host, viruses will eventually lose their ability to infect cells due to conformational changes that occur to proteins on the viral capsid. In order to undergo a conformational change, these proteins require energy to activate the chemical reaction that leads to the conformational change. In this study, data from the literature is used to calculate the energy required for viral inactivation for a variety of different viruses by means of the Arrhenius equation.

      • Hepatitis
      • Viruses
      • Norovirus
  23. Exosome-mediated human norovirus infection

    • PLOS ONE
    • by Kyle V. Todd, Ralph A. Tripp

      • Norovirus
      • Viruses
  24. Spatial and seasonal variability of human and fish viruses in mussels inside and offshore of Ravenna’s harbor (Adriatic Sea, Italy)

    • Journal of Applied Microbiology
    • Aims This study aims to investigate the presence and spatial‐seasonal variability of human and fish viruses in coastal marine systems using Ravenna’s harbor area (Adriatic Sea, Italy) as a model. Methods and Results Human viruses (noroviruses and hepatitis A virus) and one of the most threatening finfish pathogens, the nervous necrosis virus (NNV), were investigated in mussels living inside and offshore Ravenna’s harbor.

      • Viruses
      • Norovirus
      • Hepatitis
  25. Cockles and mussels, alive, alive, oh—The role of bivalve molluscs as transmission vehicles for human norovirus infections

    • Transboundary and Emerging Diseases
    • Human noroviruses are recognized as the leading worldwide cause of sporadic and epidemic viral gastroenteritis, causing morbidity and mortality in impoverished developing countries and engendering enormous economic losses in developed countries. Transmitted faecal‐orally, either via person‐to‐person contact, or by consumption of contaminated foods or water, norovirus outbreaks are often reported in institutional settings or in the context of communal dining.

      • Norovirus
      • Viruses