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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 126 - 150 of 702

  1. Transmissibility of SARS-CoV-2 among fully vaccinated individuals

    • The Lancet Infectious Diseases
    • Vaccine effectiveness studies have conclusively demonstrated the benefit of COVID-19 vaccines in reducing individual symptomatic and severe disease, resulting in reduced hospitalisations and intensive care unit admissions.1 However, the impact of vaccination on transmissibility of SARS-CoV-2 needs to be elucidated.

      • Viruses
      • COVID-19
  2. Serial antigen rapid testing in staff of a large acute hospital

    • The Lancet Infectious Diseases
    • Point-of-care (lateral flow) assays with an antigen rapid test (ART) for SARS-CoV-2 became commercially available in November 2020 worldwide, as a supplement to real-time PCR (rtPCR).1 ARTs are self-administered and detect SARS-CoV-2 antigens from anterior nares swabs and return results within minutes.

      • Viruses
      • COVID-19
  3. Protective immunity after recovery from SARS-CoV-2 infection

    • The Lancet Infectious Diseases
    • The SARS-CoV-2 pandemic is now better controlled in settings with access to fast and reliable testing and highly effective vaccination rollouts. Several studies have found that people who recovered from COVID-19 and tested seropositive for anti-SARS-CoV-2 antibodies have low rates of SARS-CoV-2 reinfection. There are still looming questions surrounding the strength and duration of such protection compared with that from vaccination.

      • Viruses
      • COVID-19
  4. The association between COVID-19 vaccination and Bell's palsy

    • The Lancet Infectious Diseases
    • In the past 100 days, more than 3 billion doses of SARS-CoV-2 vaccines have been administered globally.1 With 20 vaccines currently authorised in at least one country and 108 under clinical development as of July 20, 2021,2 there is ongoing public concern regarding the possible adverse effects of SARS-CoV-2 immunisation.

      • Viruses
      • COVID-19
  5. Protection against COVID-19: beyond antibodies

    • The Lancet Infectious Diseases
    • The COVID-19 pandemic has exposed the deep inequalities of our times. Differences in behaviour, political will, and technological capacity between affected countries have contributed to distinct outcomes.1 18 months after the COVID-19 pandemic began in China, mortality is highest among vulnerable populations without access to vaccination and those ideologically opposed to vaccination, in a way confirming that vaccines save lives.

      • Viruses
      • COVID-19
  6. Importance of epidemiological factors in the evaluation of transmissibility and clinical severity of SARS-CoV-2 variants

    • The Lancet Infectious Diseases
    • The SARS-CoV-2 delta (B.1.617.2) variant was first detected in India in December, 2020. Since then, the delta variant has rapidly become the main variant in some regions, including in the UK. As of July 27, 2021, the UK had reported the highest number of SARS-CoV-2 delta variant cases, with 167 856 patients.1

      • Viruses
      • COVID-19
  7. Emerging SARS-CoV-2 variants: shooting the messenger

    • The Lancet Infectious Diseases
    • On Nov 24, South Africa alerted the world to the latest SARS-CoV-2 variant, omicron (B.1.1.529). The omicron variant distinguishes itself from previous variants by harbouring in its genomic sequence 49 mutations (30 of which occur within the spike protein)—a jump from the 13 mutations found within the delta variant (B.1.617.2).

      • Viruses
      • COVID-19
  8. Modeling for COVID-19 college reopening decisions: Cornell, a case study

    • Proceedings of the National Academy of Sciences
    • We consider epidemiological modeling for the design of COVID-19 interventions in university populations, which have seen significant outbreaks during the pandemic. A central challenge is sensitivity of predictions to input parameters coupled with uncertainty about these parameters. Nearly 2 y into the pandemic, parameter uncertainty remains because of changes in...

      • Viruses
      • COVID-19
  9. Heterologous vaccination interventions to reduce pandemic morbidity and mortality: Modeling the US winter 2020 COVID-19 wave

    • Proceedings of the National Academy of Sciences
    • COVID-19 remains a stark health threat worldwide, in part because of minimal levels of targeted vaccination outside high-income countries and highly transmissible variants causing infection in vaccinated individuals. Decades of theoretical and experimental data suggest that nonspecific effects of non–COVID-19 vaccines may help bolster population immunological resilience to new pathogens....

      • Viruses
      • COVID-19
  10. SNX27 suppresses SARS-CoV-2 infection by inhibiting viral lysosome/late endosome entry

    • Proceedings of the National Academy of Sciences
    • After binding to its cell surface receptor angiotensin converting enzyme 2 (ACE2), severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) enters the host cell through directly fusing with plasma membrane (cell surface pathway) or undergoing endocytosis traveling to lysosome/late endosome for membrane fusion (endocytic pathway). However, the endocytic entry regulation by...

      • Viruses
      • COVID-19
  11. Epistatic models predict mutable sites in SARS-CoV-2 proteins and epitopes

    • Proceedings of the National Academy of Sciences
    • The emergence of new variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a major concern given their potential impact on the transmissibility and pathogenicity of the virus as well as the efficacy of therapeutic interventions. Here, we predict the mutability of all positions in SARS-CoV-2 protein domains to...

      • Viruses
      • COVID-19
  12. Alteration of the gut microbiota following SARS-CoV-2 infection correlates with disease severity in hamsters

    • Gut Microbes
      • Viruses
      • COVID-19
  13. Probiotic improves symptomatic and viral clearance in Covid19 outpatients: a randomized, quadruple-blinded, placebo-controlled trial

    • Gut Microbes
      • Viruses
      • COVID-19
  14. The significant immune escape of pseudotyped SARS-CoV-2 variant Omicron

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  15. Identification of the SARS-CoV-2 Delta variant C22995A using a high-resolution melting curve RT-FRET-PCR

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  16. Reduced sensitivity of the SARS-CoV-2 Lambda variant to monoclonal antibodies and neutralizing antibodies induced by infection and vaccination

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  17. Outcomes of patients with severe and critical COVID-19 treated with dexamethasone: a prospective cohort study

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  18. Experimental and field investigations of exposure, replication and transmission of SARS-CoV-2 in pigs in the Netherlands

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  19. Infection and transmission of ancestral SARS-CoV-2 and its alpha variant in pregnant white-tailed deer

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  20. A monoclonal antibody that neutralizes SARS-CoV-2 variants, SARS-CoV, and other sarbecoviruses

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  21. Two novel human coronavirus OC43 genotypes circulating in hospitalized children with pneumonia in China

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  22. A year living with SARS-CoV-2: an epidemiological overview of viral lineage circulation by whole-genome sequencing in Barcelona city (Catalonia, Spain)

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  23. A second functional furin site in the SARS-CoV-2 spike protein

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  24. Preclinical immunological evaluation of an intradermal heterologous vaccine against SARS-CoV-2 variants

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19
  25. COVID-19 prevention measures reduce dengue spread in Yunnan Province, China, but do not reduce established outbreak

    • Emerging Microbes & Infections
      • Viruses
      • COVID-19