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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 576 - 600 of 42057

  1. Continuous production and recirculation of plasma‐activated water bubbles under different flow regimes for mixed‐species bacterial biofilm inactivation inside pipelines

    • Journal of Food Safety
    • The study compared the effects of the flow regimes (laminar, transitional, and turbulent), treatment time, and the volume of water and plasma‐activated water bubbles circulation on the inactivation of the mixed‐species biofilms of Salmonella Typhimurium and Aeromonas australiensis grown on the inner surfaces of the polyvinyl chloride pipes. Abstract Biofilm formation in broiler drinking water systems is a public health concern.

      • Bacterial pathogens
      • Salmonella
  2. A novel enrichment and sensitive method for rapid determination of 4 sulfonamide antibiotics residues in fish

    • LWT
    • Sulfonamide antibiotics with superior performance are widely used in aquaculture. However, the residues of sulfonamide antibiotics in aquatic products may pose a threat to human health. In this work, a novel type of magnetic molecularly imprinted polymer (mMIP) was synthesized and coupled with ultra-high performance liquid chromatography–tandem mass spectrometry (UHPLC-MS/MS) for the selective separation and determination of 4 sulfonamide antibiotics residues in tilapia.

      • Chemical contaminants
      • Antibiotic residues
  3. High-Performance Liquid Chromatography–Fluorescence Detection Method for Ochratoxin A Quantification in Small Mice Sample Volumes: Versatile Application across Diverse Matrices Relevant for Neurodegeneration Research

    • Toxins
    • Ochratoxin A (OTA) is a mycotoxin commonly found in various food products, which poses potential health risks to humans and animals. Recently, more attention has been directed towards its potential neurodegenerative effects. However, there are currently no fully validated HPLC analytical methods established for its quantification in mice, the primary animal model in this field, that include pivotal tissues in this area of research, such as the intestine and brain.

      • Natural toxins
      • Mycotoxins
  4. Genome sequence, antibiotic resistance genes, and plasmids in a monophasic variant of Salmonella typhimurium isolated from retail pork

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. A Salmonella isolate from retail pork was whole genome sequenced using Illumina NovaSeq6000, with a 5,320,119 bp genome and 51.06% GC content. Several antibiotic resistance genes and plasmids, including blaTEM-1, aac(6')-IIc, IncHI2, and p0111 were obtained from subsequent analysis.

      • Bacterial pathogens
      • Salmonella
  5. Draft genome sequence of a Shiga toxin-producing Escherichia coli strain from deer meat showing an IS-element integration in the B-subunit of the Shiga toxin Stx2b gene

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Shiga toxin-producing Escherichia coli (STEC) are important food-borne pathogens. Here we report sequence data of the STEC strain BfR-EC-18960, which has integrated IS elements in the B-subunit of the Shiga toxin Stx2b gene. The strain was isolated from deer meat at a local butchery in Germany in 2021.
       

      • Bacterial pathogens
      • Escherichia coli O157:H7
  6. Genome analysis of Salmonella enterica serovar enteritis strains isolated from poultry and humans in Burkina Faso

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Whole-genome sequencing (WGS) was used to characterize four Salmonella enterica Enteritidis isolates from poultry (n=2) and human (n=2) from Ouagadougou, Burkina Faso. Antimicrobial resistance genes, chromosomal mutations, and mobile genetic elements were identified by analysis of WGS data using sequence homology.
       

      • Bacterial pathogens
      • Salmonella
  7. Validation of a simulated commercial traditional crust pepperoni pizza baking process and thermal inactivation parameters of a 3‐serovar Salmonella inoculum in pizza dough

    • Journal of Food Safety
    • Validation of traditional crust pepperoni pizza baking process. Abstract The objective of this study was to validate a simulated commercial baking process for traditional crust pepperoni pizza to inactivate Salmonella when contamination was introduced through inoculated flour and pepperoni slices.

      • Bacterial pathogens
      • Salmonella
  8. FgPfn participates in vegetative growth, sexual reproduction, pathogenicity, and fungicides sensitivity via affecting both microtubules and actin in the filamentous fungus Fusarium graminearum

    • PLOS Pathogens
    • by Zhili Yuan, Pengfei Li, Xin Yang, Xiaowei Cai, Luoyu Wu, Feifei Zhao, Weidong Wen, Mingguo Zhou, Yiping Hou Fusarium head blight (FHB), caused by Fusarium graminearum species complexes (FGSG), is an epidemic disease in wheat and poses a serious threat to wheat production and security worldwide. Profilins are a class of actin-binding proteins that participate in actin depolymerization. However, the roles of profilins in plant fungal pathogens remain largely unexplored.

      • Natural toxins
      • Mycotoxins
  9. Raw meat-based diet for pets: a neglected source of human exposure to Salmonella and pathogenic Escherichia coli clones carrying mcr, Portugal, September 2019 to January 2020

    • Eurosurveillance
    • Background

      The pet industry is expanding worldwide, particularly raw meat-based diets (RMBDs). There are concerns regarding the safety of RMBDs, especially their potential to spread clinically relevant antibiotic-resistant bacteria or zoonotic pathogens.

      Aim

      • Bacterial pathogens
      • Salmonella
  10. Study on the correlation of supplementation with L-citrulline on the gastrointestinal flora and semen antifreeze performance of ram

    • Frontiers in Microbiology
    • IntroductionCryopreservation of semen can give full play to the reproductive advantages of male animals. However, in actual production, due to the poor frost resistance of sheep semen and the low conception rate, the promotion of sheep frozen semen is greatly hindered. Therefore, it is urgent to improve the frost resistance of semen to improve the quality of frozen semen.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Vibrio
  11. AMR Threat Perception Assessment of Heterotrophic Bacteria From Shrimp Aquaculture Through Epidemiological Cut off Values

    • Journal of AOAC INTERNATIONAL
    • Background Emergence and dissemination of antibiotic resistance is one of the major risks associated with the rampant usage of antibiotics in food-producing animals including aquaculture.

      • Bacterial pathogens
      • Vibrio
  12. Effect of Selective Enrichment Storage Temperature and Duration Time on the Detection of Salmonella in Food

    • Journal of AOAC INTERNATIONAL
    • Background For pathogen detection in food, there are occasions where samples cannot be processed immediately after selective enrichment or need to be reexamined days or weeks later for confirmation or retest. Objective This study aimed to investigate the effect of different prolonged period of storage of selective enrichments of food at 4 ± 2°C and room temperature (20–22°C) on the detection and isolation of Salmonella.

      • Bacterial pathogens
      • Salmonella
  13. Modeling thermal inactivation of Salmonella Enteritidis in ground chicken supplemented with a mixture of ribwort, sorrel, and yarrow extracts

    • Journal of Food Process Engineering
    • This study investigates if a mixture of ribwort, sorrel, and yarrow extracts can reduce the thermal resistance of Salmonella Enteritidis in ground chicken. The thermal death kinetics calculated by curve fitting to the log‐linear and Weibull models revealed that the herbal extract mixture may provide Salmonella‐free cooked chicken products.

      • Bacterial pathogens
      • Salmonella
  14. Multidrug resistance in Salmonella isolates of swine origin: mobile genetic elements and plasmids associated with cephalosporin resistance with potential transmission to humans

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. The emergence of foodborne Salmonella strains carrying antimicrobial resistance (AMR) in mobile genetic elements (MGE) is a significant public health threat in a One Health context requiring continuous surveillance. Resistance to ciprofloxacin and cephalosporins is of particular concern.

      • Bacterial pathogens
      • Salmonella
  15. Unveiling the gut bacteriome diversity and distribution in the national fish hilsa (Tenualosa ilisha) of Bangladesh

    • PLOS ONE
    • by A. Q. M. Robiul Kawser, M. Nazmul Hoque, M. Shaminur Rahman, Tahsin Islam Sakif, Tracey J. Coffey, Tofazzal Islam The field of fish microbiome research has rapidly been advancing, primarily focusing on farmed or laboratory fish species rather than natural or marine fish populations.

      • Bacterial pathogens
      • Shigella
      • Staphylococcus aureus
  16. Extract of Scutellaria baicalensis and Lonicerae flos improves growth performance, antioxidant capacity, and intestinal barrier of yellow-feather broiler chickens against Clostridium perfringens

    • Poultry Science
    • In this study, we aimed to investigate the effect of Scutellaria baicalensis and Lonicerae Flos (SL) extract on the growth performance and intestinal health of yellow-feather broilers following a Clostridium perfringens challenge.

      • Bacterial pathogens
      • Clostridium perfringens
  17. Assessment of fish protein hydrolysate as a substitute for fish meal in white shrimp diets: Impact on growth, immune response, and resistance against Vibrio parahaemolyticus infection

    • Fish & Shellfish Immunology
    • This study investigated the effects of fish protein hydrolysate derived from barramundi on growth performance, muscle composition, immune response, disease resistance, histology and gene expression in white shrimp (Penaeus vannamei). In vitro studies demonstrated FPH enhanced mRNA expressions of key immune-related genes and stimulated reactive oxygen species (ROS) production and phagocytic activity in shrimp hemocytes.

      • Bacterial pathogens
      • Vibrio
  18. Staphylococcus aureus isolated from traditional artisanal raw milk cheese from southern Brazil: diversity, virulence, and antimicrobial resistance profile

    • Journal of Food Protection
    • Staphylococcus aureus is one of the primary pathogenic agents found in cheeses produced with raw milk. Some strains of S. aureus are enterotoxigenic, possessing the ability to produce toxins responsible for staphylococcal food poisoning when present in contaminated foods. This study aimed to genotypically characterize, assess the antimicrobial resistance profile, and examine the enterotoxigenic potential of strains of S.

      • Bacterial pathogens
      • Staphylococcus aureus
  19. Mitigating cadmium contamination in rice: insights from a large-scale meta-analysis of amendment effects

    • Plant and Soil
    • Background and aims Cadmium (Cd) pollution in rice is a health hazard. to humans. Amendments often decreases soil Cd bioavailability and Cd accumulation in rice plants. However, a complete and quantitative understanding of the effects of soil amendment on soil properties, Cd availability, rice yield, and Cd accumulation in rice is lacking.

      • Chemical contaminants
      • Heavy Metals
  20. Understanding phloem's role in long-distance transport and accumulation of arsenic (As) in rice: toward low-As-accumulating grain development

    • Planta
    • Abstract Rice is a staple diet for a significant proportion of the global population. As toxicity is a major issue affecting the rice productivity and quality worldwide. Phloem tissues of rice plants play vital roles in As speciation, long-distance transport, and unloading, thereby controlling the As accumulation in rice grains.

      • Chemical contaminants
      • Heavy Metals
  21. Identification and classification of the genomes of novel microviruses in poultry slaughterhouse

    • Frontiers in Microbiology
    • Microviridae is a family of phages with circular ssDNA genomes and they are widely found in various environments and organisms. In this study, virome techniques were employed to explore potential members of Microviridae in a poultry slaughterhouse, leading to the identification of 98 novel and complete microvirus genomes.

      • Bacterial pathogens
      • Vibrio
  22. Whole-Genome Sequencing-Based Confirmatory Methods on RT-qPCR Results for the Detection of Foodborne Viruses in Frozen Berries

    • Food and Environmental Virology
    • Accurate detection, identification, and subsequent confirmation of pathogens causing foodborne illness are essential for the prevention and investigation of foodborne outbreaks. This is particularly true when the causative agent is an enteric virus that has a very low infectious dose and is likely to be present at or near the limit of detection.

      • Viruses
      • Hepatitis
      • Norovirus
  23. Multistate outbreaks of salmonellosis linked to contact with backyard poultry—United States, 2015–2022

    • Zoonoses and Public Health
    • Abstract Aims Contact with backyard poultry (i.e., privately‐owned, non‐commercial poultry) was first associated with a multistate outbreak of salmonellosis in 1955. In recent years, backyard poultry‐associated salmonellosis outbreaks have caused more illnesses in the United States than salmonellosis outbreaks linked to any other type of animal. Here, we describe the epidemiology of outbreaks from 2015–2022 to inform prevention efforts.

      • Bacterial pathogens
      • Salmonella
  24. Conspicuous chloroplast with light harvesting-photosystem I/II megacomplex in marine Prorocentrum cordatum

    • Plant Physiology
    • Marine photosynthetic (micro)organisms drive multiple biogeochemical cycles and display a large diversity. Among them, the bloom-forming, free-living dinoflagellate Prorocentrum cordatum CCMP 1329 (formerly P. minimum) stands out with its distinct cell biological features. Here, we obtained insights into the structural properties of the chloroplast and the photosynthetic machinery of P. cordatum using microscopic and proteogenomic approaches.

      • Natural toxins
      • Shellfish toxins
  25. Biochar Application Method and Amount Both Changed the Dynamics of Soil Temperature-Moisture-Metals in an Acidic Inceptisols

    • Water, Air, & Soil Pollution
    • The biochar was derived from four feedstocks: buckwheat straw, rice straw, mustard stover, and soybean stover. The results showed that, with increase in biochar application rate the soil temperature increased significantly in both 0–15 and 15–30 cm soil depth. The soil temperature decreased with increase in soil depth after different feedstock derived biochar application.

      • Chemical contaminants
      • Heavy Metals