An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1951 - 1975 of 42062

  1. Detection of Hepatitis A RNA, Hepatitis E RNA, Human Adenovirus F DNA, and Norovirus RNA in Fresh and Frozen Berry Products at Point of Retail in Ireland

    • Food and Environmental Virology
    • Soft fruits are at particular risk of contamination with enteric viruses such as Hepatitis A virus (HAV), Hepatitis E Virus (HEV), Norovirus (NoV), Human Adenovirus (HAdV) and Sapovirus (SaV). The aim of this study was to investigate, for the first time, the presence of these biological agents in ready to eat (RTE) berries at point of retail in Ireland.

      • Viruses
      • Hepatitis
      • Norovirus
  2. Phage biocontrol effectively reduces contamination of wheat with Shiga toxin-producing Escherichia coli O121 and O26 without adverse effects on flour quality

    • Journal of Food Protection
    • Contamination of wheat flours with Shiga toxin-producing E. coli (STEC) is a concern for the milling industry. Milling-specific interventions are needed to address this food safety hazard. The objectives for this study were to determine the efficacy of bacteriophage treatment in reducing wheat STEC contamination during tempering and assess its effects on flour milling and baking quality.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  3. Pilot study on nasal microbiota dynamics and MRSA carriage of a pig cohort housed on straw bedding

    • Molecular Microbiology
    • Molecular Microbiology, EarlyView. Methicillin-resistant Staphylococcus aureus (MRSA) can be transmitted between pigs and humans on farms. Hence, the reduction of MRSA carriage in pigs could decrease the risk of zoonotic transmission. Recently, straw bedding has been found to significantly reduce MRSA carriage in pigs. The mechanisms behind this effect remain unclear but changes in the nasal microbiome may play a role.

      • Bacterial pathogens
      • Staphylococcus aureus
  4. Extraction, identification, mechanism of action, and application of Hu Zhang (Polygonum cuspidatum) extracts against non-O1/O139 Vibrio cholerae in prawn storage

    • LWT
    • Plant-derived alternatives to antibiotics are of great concern. The goal of this work was to enhance the Hu Zhang (Polygonum cuspidatum) extraction procedure against non-O1/O139 V. cholerae (HZE), identify the antibacterial components, analyze the mechanism of action, and investigate its potential in prawn storage.

      • Bacterial pathogens
      • Vibrio
  5. Quantification of Salmonella transfer in cross-contamination scenarios found in chicken slaughterhouses

    • Food Microbiology
    • Chicken are among the main reservoirs of Salmonella, and slaughterhouses have been identified as key sites for cross-contamination of this pathogen. This study aimed to quantify the transfer rate of Salmonella in different cross-contamination scenarios found in chicken slaughterhouses. To this end, a pool of Salmonella spp. Was inoculated onto chicken carcasses and thighs, reaching out concentrations of 2–5 log10 CFU/g.

      • Bacterial pathogens
      • Salmonella
  6. Metagenomic insights into the effects of cosmetics containing complex polysaccharides on the composition of skin microbiota in females

    • Frontiers in Cellular and Infection Microbiology
    • Introduction The use of cosmetics has become a habit for women. However, their influence on the microbial diversity of the skin has rarely been studied. Methods Herein, the effect of cosmetics containing complex polysaccharides on the skin bacterial microbiota of female forehead and cheek areas was analyzed.

      • Bacterial pathogens
      • Staphylococcus aureus
  7. Fusarium Species and Mycotoxins Associated with Sorghum Grains in Uruguay

    • Toxins
    • Grain mold and stalk rot are among the fungal diseases that cause significant losses in sorghum worldwide and are caused by different Fusarium spp. The presence of Fusarium species in sorghum grains causes yield losses and mycotoxin contamination, which represents a risk to consumers. In this study, Fusarium graminearum species complex (FGSC) had a high incidence, followed by Fusarium fujikuroi species complex (FFSC) and F. incarnatum-equiseti species complex. Within FFSC, F.

      • Natural toxins
      • Mycotoxins
  8. First Confirmed Case of Canine Mortality Due to Dihydroanatoxin-a in Central Texas, USA

    • Toxins
    • The frequency of dogs becoming ill or dying from accidental exposure to cyanotoxins, produced by cyanobacteria, is increasing throughout the United States. In January and February of 2021, two dogs died and five dogs became ill after swimming in Lake Travis, central Texas, USA; one deceased dog (C1) was subjected to pathological testing.

      • Natural toxins
      • Shellfish toxins
  9. Segmented filamentous bacteria-based treatment to elicit protection against Enterobacteriaceae in Layer chickens

    • Frontiers in Microbiology
    • Introduction Gut microbes like segmented filamentous bacteria (SFB) play a key role in gut maturation during early life, as demonstrated in humans and mice. Our previous study demonstrated oral inoculation of ileum-spores containing SFB to chickens after hatch increases early SFB gut colonization, which increases immune maturation and resistance to bacteria, like Salmonella, as tested in vitro; however, more studies are needed for treatment optimization and in vivo testing.

      • Bacterial pathogens
      • Salmonella
  10. Characterization of Salmonella Thompson-specific bacteriophages and their preventive application against Salmonella Thompson biofilm on eggshell as a promising antimicrobial agent in the food industry

    • Food Control
    • Salmonella Thompson is a foodborne pathogen that has attracted attention in Korea since it was identified as the cause of a large-scale domestic food poisoning outbreak in 2018.

      • Bacterial pathogens
      • Salmonella
  11. In vitro and in vivo evaluation of tannic acid as an antibacterial agent in broilers infected with Salmonella Typhimurium

    • Poultry Science
    • This study was conducted to evaluate tannic acid (TA) as an antibacterial agent against Salmonella Typhimurium in in vitro and in vivo chicken models. The TA formed an inhibitory zone against Salmonella enterica serotypes including S. Typhimurium, S. Enteritidis, and S. Infantis.

      • Bacterial pathogens
      • Salmonella
  12. Elucidation of the Bovine Intramammary Bacteriome and Resistome from healthy cows of Swiss dairy farms in the Canton Tessin

    • Frontiers in Microbiology
    • Healthy, untreated cows of nine dairy herds from the Swiss Canton Tessin were analyzed three times within one year to identify the most abundant species of the intramammary bacteriome. Aseptically collected milk samples were cultured and bacteria identified using MALDI-TOF. Of 256 cows analyzed, 96% were bacteriologically positive and 80% of the 1,024 quarters were positive for at least one bacterial species.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Selection of lactic acid bacteria as biopreservation agents and optimization of their mode of application for the control of Listeria monocytogenes in ready-to-eat cooked meat products

    • International Journal of Food Microbiology
    • In order to meet consumers´ demands for more natural foods and to find new methods to control foodborne pathogens in them, research is currently being focused on alternative preservation approaches, such as biopreservation with lactic acid bacteria (LAB). Here, a collection of lactic acid bacteria (LAB) isolates was characterized to identify potential biopreservative agents.

      • Bacterial pathogens
      • Listeria monocytogenes
  14. A CRISPR-Cas9 mutation in sox9b long intergenic noncoding RNA (slincR) affects zebrafish development, behavior, and regeneration

    • Toxicological Sciences
    • The role of long noncoding RNAs (lncRNAs) regulators of toxicological responses to environmental chemicals is gaining prominence. Previously, our laboratory discovered an lncRNA, sox9b long intergenic noncoding RNA (slincR), that is activated by multiple ligands of aryl hydrocarbon receptor (AHR).

      • Chemical contaminants
      • Dioxins
  15. Temporal variability of microbiome in the different plankton hosts revealed distinct environmental persistence of Vibrio parahaemolyticus in shrimp farms

    • Microbiological Research
    • Plankton-bacteria interactions may play essential roles in maintaining the persistence of pathogenic Vibrio spp. However, the actual plankton host of the toxigenic Vibrio parahaemolyticus that harbors thermostable direct hemolysin (TDH) and TDH-related hemolysin (TRH) remains unclear.

      • Bacterial pathogens
      • Vibrio
  16. Characterization of the Clostridium perfringens phage endolysin cpp-lys and its application on lettuce

    • International Journal of Food Microbiology
    • Clostridium perfringens is an important foodborne pathogen that can have severe consequences, including mortality and economic losses.

      • Bacterial pathogens
      • Clostridium perfringens
  17. Cattle-related occupational accidents in Japan

    • PLOS ONE
    • by Hilomi Iwai, Hideki Yamamoto Cattle-related injuries are a significant contributing factor in 84.3% of livestock-related incidents in Hokkaido Japan. The specific countermeasures to respond to its characteristics are needed because cattle move freely. This study examined the JA Kyosai mutual aid payment claim form data of the agricultural work-related incidents that occurred from 1st January 2013 to 31st December 2016.

      • Chemical contaminants
      • Heavy Metals
  18. Gene expression analyses reveal potential mechanism of inorganic arsenic‐induced apoptosis in zebrafish

    • Journal of Applied Toxicology
    • Journal of Applied Toxicology, EarlyView. Our previous study showed that sodium arsenite (200 mg/L) affected the nervous system and induced motor neuron development via the Sonic hedgehog pathway in zebrafish larvae. To gain more insight into the effects of arsenite on other signaling pathways, including apoptosis, we have performed quantitative polymerase chain reaction array-based gene expression analyses.

      • Chemical contaminants
      • Heavy Metals
  19. Effects of Lipopolysaccharide and Deoxynivalenol on the Survival, Antioxidant and Immune Response, and Histopathology of Crayfish (Procambarus clarkii)

    • Toxins
    • Bacterial lipopolysaccharide (LPS) in the aquatic environment has been reported to cause diseases in red swamp crayfish (Procambarus clarkii). In addition, deoxynivalenol (DON) is one of the primary mycotoxins found in aquaculture. However, the potential synergistic toxic effects of LPS and DON on crayfish are yet to be fully elucidated.

      • Natural toxins
      • Mycotoxins
  20. Intestinal colonization with Campylobacter jejuni affects broiler gut microbiota composition but is not inhibited by daily intake of Lactiplantibacillus plantarum

    • Frontiers in Microbiology
    • Introduction

      Lactobacilli may prevent broilers from colonization with Campylobacter spp. and other gram-negative zoonotic bacteria through lactic acid production and modulation of the intestinal microbiota. This study evaluated the effects of daily intake of Lactiplantibacillus plantarum 256 (LP256) on Campylobacter jejuni (C. jejuni) loads in ceca and feces of C. jejuni challenged broilers, together with the changes in the gut microbiota.

      Methods

      • Bacterial pathogens
      • Campylobacter
  21. The difference in the composition of gut microbiota is greater among bats of different phylogenies than among those with different dietary habits

    • Frontiers in Microbiology
    • Bats have a very long evolutionary history and are highly differentiated in their physiological functions. Results of recent studies suggest effects of some host factors (e.g., phylogeny and dietary habit) on their gut microbiota. In this study, we examined the gut microbial compositions of 18 different species of bats. Results showed that Firmicutes, Gammaproteobacteria, and Actinobacteria were dominant in all fecal samples of bats.

      • Bacterial pathogens
      • Vibrio
  22. Antilisterial activity of cinnamon essential oil, pomegranate extract, or strawberry tree extract against Listeria monocytogenes in slices of dry-cured ham and pork loin

    • Food Science and Technology International
    • Owing to concerns about the antimicrobial resistance of agents that can prevent the growth of Listeria monocytogenes in meat, researchers have investigated natural preservatives with antilisterial effects. However, in vivo application of essential oils and plant extracts usually results in reduced antimicrobial activity in meat products when compared to in vitro studies.

      • Bacterial pathogens
      • Listeria monocytogenes
  23. Deciphering Staphylococcus xylosus and Staphylococcus equorum mode of action against Penicillium nordicum in a dry-cured ham model system

    • International Journal of Food Microbiology
    • Penicillium nordicum is one of the major producers of ochratoxin A (OTA) in dry-cured ham. Staphylococcus xylosus Sx8 and S. equorum Se31 have been previously proposed as biocontrol agents (BCAs) to prevent the OTA contamination, although their antifungal mode of action has not been established yet. Thus, the aim of this work was to elucidate their mode of action against P. nordicum in a dry-cured ham model system.

      • Bacterial pathogens
      • Staphylococcus aureus
  24. Pb(II)-inducible proviolacein biosynthesis enables a dual-color biosensor toward environmental lead

    • Frontiers in Microbiology
    • With the rapid development of synthetic biology, various whole-cell biosensors have been designed as valuable biological devices for the selective and sensitive detection of toxic heavy metals in environmental water. However, most proposed biosensors are based on fluorescent and bioluminescent signals invisible to the naked eye. The development of visible pigment-based biosensors can address this issue. The pbr operon from Klebsiella pneumoniae is selectively induced by bioavailable Pb(II).

      • Chemical contaminants
      • Heavy Metals
  25. Inter-species competition of surface bacterial flora of pomegranate and their role in spoilage

    • World Journal of Microbiology and Biotechnology
    • The surface of fruits is heterogenous in term of its microenvironment hence dictate the kind of microflora that develops during storage. A better understanding of spoilage organisms would lead to better preservation methods. The pomegranate was chosen, since its sturdy and spoils slow at room temperature and is ideal for studying fruit spoilage in-situ. In the current study we isolated organisms from fruit surface and study the spoilage and competition amongst microbial species.

      • Bacterial pathogens
      • Staphylococcus aureus