An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 4651 - 4675 of 42078

  1. Norovirus GI and GII and hepatitis a virus in berries and pomegranate arils in Canada

    • International Journal of Food Microbiology
    • Between 2016 and 2021, the Canadian Food Inspection Agency (CFIA) collected 4218 samples of fresh and frozen berries (blackberries, blueberries, raspberries, strawberries and mixed berries) and pomegranate arils at retail across 11 major cities in Canada and tested these samples for the presence of norovirus GI, norovirus GII and hepatitis A virus RNA.

      • Viruses
      • Hepatitis
      • Norovirus
  2. Transcriptomics reveals the mechanism of selenium-enriched Lactobacillus plantarum alleviating brain oxidative stress under cadmium stress in Luciobarbus capito

    • Ecotoxicology and Environmental Safety
    • Cadmium (Cd) is one of toxic metal in environment and is thought to affect nervous system. There were an increasing number of studies on selenium (Se)-enriched probiotics which were believed to produce bioactive nanoselenium. The antagonism of Se on heavy metals can significantly affect biological toxicity of heavy metals.

      • Chemical contaminants
      • Heavy Metals
  3. Associations of typical antibiotic residues with elderly blood lipids and dyslipidemia in West Anhui, China

    • Ecotoxicology and Environmental Safety
    • Growing evidence has indicated the association of clinical antibiotic use with abnormal blood lipid levels; however, no epidemiological study has examined the relationship of antibiotic exposure, probably derived from food chains, with blood lipid levels. This study investigated the relationships of urinary antibiotic levels with blood lipid levels and dyslipidemias in the older population.

      • Chemical contaminants
      • Antibiotic residues
  4. Oxygen-dependent regulation of permeability in low resistance intestinal epithelial cells infected with Giardia lamblia

    • Experimental Parasitology
    • Intestinal epithelial cells (IECs) reside in a highly anaerobic environment that is subject to daily fluctuations in partial oxygen pressure (pO2), depending on intestinal tissue perfusion.

      • Parasites
      • Giardia lamblia
  5. Antifungal and antimycotoxic activities of 3 essential oils against 3 mycotoxinogenic fungi

    • Archives of Microbiology
    • Fungal toxins can have various adverse health effects, including carcinogenic, teratogenic or hepatotoxic impacts. In addition, fungal alteration has also a negative impact on agricultural plant production. The use of chemical fungicides to control mycotoxin contamination is increasingly controversial and regulated. More environmentally friendly methods are therefore being explored.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  6. Deoxynivalenol Biosynthesis in Fusarium pseudograminearum Significantly Repressed by a Megabirnavirus

    • Toxins
    • Deoxynivalenol (DON) is a mycotoxin widely detected in cereal products contaminated by Fusarium. Fusarium pseudograminearum megabirnavirus 1 (FpgMBV1) is a double-stranded RNA virus infecting Fusarium pseudograminearum. In this study, it was revealed that the amount of DON in F. pseudograminearum was significantly suppressed by FpgMBV1 through a high-performance liquid chromatography–tandem mass spectrometry (HPLC-MS/MS) assay.

      • Natural toxins
      • Mycotoxins
  7. Deepening the Whole Transcriptomics of Bovine Liver Cells Exposed to AFB1: A Spotlight on Toll-like Receptor 2

    • Toxins
    • Aflatoxin B1 (AFB1) is a food contaminant metabolized mostly in the liver and leading to hepatic damage. Livestock species are differently susceptible to AFB1, but the underlying mechanisms of toxicity have not yet been fully investigated, especially in ruminants. Thus, the aim of the present study was to better characterize the molecular mechanism by which AFB1 exerts hepatotoxicity in cattle.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  8. Genetic Diversity and Virulence Profile of Methicillin and Inducible Clindamycin-Resistant Staphylococcus aureus Isolates in Western Algeria

    • Antibiotics
    • Staphylococcus aureus causes a wide range of life-threatening infections. In this study, we determined its prevalence in the hospital environment and investigated nasal carriage among healthcare workers and patients admitted to a hospital in western Algeria. A total of 550 specimens were collected. An antibiogram was performed and the genes encoding resistance to methicillin, inducible clindamycin and toxins were sought among the 92 S. aureus isolates.

      • Bacterial pathogens
      • Staphylococcus aureus
  9. Nisin Mutant Prevention Concentration and the Role of Subinhibitory Concentrations on Resistance Development by Diabetic Foot Staphylococci

    • Antibiotics
    • The most prevalent microorganism in diabetic foot infections (DFI) is Staphylococcus aureus, an important multidrug-resistant pathogen. The antimicrobial peptide nisin is a promising compound for DFI treatment, being effective against S. aureus.

      • Bacterial pathogens
      • Staphylococcus aureus
  10. Antibiotic Resistance of Bacterial Isolates from Smallholder Poultry Droppings in the Guinea Savanna Zone of Nigeria

    • Antibiotics
    • There is a growing risk of antibiotic resistance (AR) in smallholder poultry (SP). This study, therefore, aimed to investigate AR pattern of bacterial isolates from SP in the Guinea Savanna agro-ecological zone of Nigeria. A total of 120 fresh poultry droppings were aseptically collected, randomly, from two tropically adapted (FUNAAB Alpha and Noiler) and local chickens. The chickens were raised either using ethnoveterinary medicines (n = 60) or antibiotics (n = 60).

      • Bacterial pathogens
      • Salmonella
  11. Staphylococcus aureus Infection Initiates Hypoxia-Mediated Transforming Growth Factor-β1 Upregulation to Trigger Osteomyelitis

    • mSystems
    • mSystems, Ahead of Print. Little is unknown about the regulatory mechanisms underlying the pathogenesis of osteomyelitis induced by Staphylococcus aureus. Hypoxia-inducible factor-1α (HIF-1α) and transforming growth factor β1 (TGF-β1) were both upregulated in S. aureus-infected MC3T3-E1 cells and osteomyelitis patients. HIF-1α directly targets the hypoxia-responsive elements (HREs) of TGF-β1 mRNA to induce its expression.

      • Bacterial pathogens
      • Staphylococcus aureus
  12. Small-Molecule-Induced Activation of Cellular Respiration Inhibits Biofilm Formation and Triggers Metabolic Remodeling in Staphylococcus aureus

    • mBio
    • mBio, Ahead of Print. Staphylococcus aureus, a major pathogen of community-acquired and nosocomial-associated infections, forms biofilms consisting of extracellular matrix-embedded cell aggregates. S. aureus biofilm formation on implanted medical devices can cause local and systemic infections due to the dispersion of cells from the biofilms.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Dysregulation of Cell Envelope Homeostasis in Staphylococcus aureus Exposed to Solvated Lignin

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. Lignin is an aromatic plant cell wall polymer that facilitates water transport through the vasculature of plants and is generated in large quantities as an inexpensive by-product of pulp and paper manufacturing and biorefineries. Although lignin’s ability to reduce bacterial growth has been reported previously, its hydrophobicity complicates the ability to examine its biological effects on living cells in aqueous growth media.

      • Bacterial pathogens
      • Staphylococcus aureus
  14. Molecular characterization of Giardia duodenalis and evidence for cross‐species transmission in Northern Argentina

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page 2209-2218, July 2022. Anthropogenic activities, such as human population expansion and land-use change, create ecological overlap between humans, domesticated animals, and wildlife and can exacerbate the zoonotic transmission of parasites.

      • Parasites
      • Giardia lamblia
  15. Evolutionary history and spatiotemporal dynamic of GIII norovirus: From emergence to classification in four genotypes

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page 1872-1879, July 2022. Noroviruses belong to a genetically diverse group of viruses infecting a wide range of mammalian host species, and those detected in cattle and sheep are classified within genogroup III (GIII).

      • Viruses
      • Norovirus
  16. A pilot study revealing host‐associated genetic signatures for source attribution of sporadic Campylobacter jejuni infection in Egypt

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page 1847-1861, July 2022. Campylobacter jejuni (C. jejuni), is considered among the most common bacterial causes of human bacterial gastroenteritis worldwide. The epidemiology and the transmission dynamics of campylobacteriosis in Egypt remain poorly defined due to the limited use of high-resolution typing methods.

      • Bacterial pathogens
      • Campylobacter
  17. Molecular characterization of Vibrio cholerae O1 El Tor strains in Malaysia revealed genetically diverse variant lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page e693-e703, July 2022. Vibrio cholerae O1 El Tor variants have been the major causative agents of cholera worldwide since their emergence in the 2000s. Cholera remains endemic in some regions in Malaysia. Therefore, we aimed to investigate the genetic characteristics of the V.

      • Bacterial pathogens
      • Vibrio
  18. A multi‐jurisdictional outbreak of Salmonella Typhimurium infections linked to backyard poultry—Australia, 2020

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Zoonotic salmonellosis can occur either through direct contact with an infected animal or through indirect contact, such as exposure to an infected animal's contaminated environment. Between May and August 2020, a multi-jurisdictional outbreak of Salmonella Typhimurium (STm) infection due to zoonotic transmission was investigated in Australia. In total, 38 outbreak cases of STm with a median age of 5 years were reported.

      • Bacterial pathogens
      • Salmonella
  19. Molecular and serological detection of Toxoplasma gondii infection in mammals in the Taipei Zoo

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Toxoplasmosis caused by Toxoplasma gondii affects both conservation and public health efforts. In the Taipei Zoo, toxoplasmosis was diagnosed in ring-tailed lemurs and a meerkat in 2019 while a freeze–thaw meat strategy had been applied to carnivores before the event.

      • Parasites
      • Toxoplasma gondii
  20. The presence and transfer characteristics of aflatoxins in medicinal herbs: From raw materials to edible dispensing granules

    • Journal of Separation Science
    • Journal of Separation Science, Accepted Article. In this study, a sensitive and accurate immunoaffinity columns coupled with high performance liquid chromatography method was established to monitor the presence of aflatoxins—aflatoxin B1, aflatoxin B2, aflatoxin G1, and aflatoxin G2—in different medicinal herbs. The proposed method was found to be suitable for the detection of aflatoxins in eight kinds of herbs and their corresponding granules.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  21. Molecular epidemiology and genotype-specific disease severity of hepatitis E virus infections in Germany, 2010–2019

    • Emerging Microbes & Infections
    • Zoonotic hepatitis E virus (HEV) is endemic in Europe. Genotype 3 (HEV-3) is predominant but information on subtype distribution, trends and clinical implications in Germany is scarce. We analysed 936 HEV RNA positive samples of human origin and corresponding national surveillance data from 2010 to 2019. Samples were referred to the National Consultant Laboratory and sequenced in at least one of four genomic regions.

      • Viruses
      • Hepatitis
  22. Kernel principal component analysis and differential non-linear feature extraction of pesticide residues on fruit surface based on surface-enhanced Raman spectroscopy

    • Frontiers in Plant Science
    • Surface-enhanced Raman spectroscopy (SERS) has attracted much attention because of its high sensitivity, high speed, and simple sample processing, and has great potential for application in the field of pesticide residue detection.

      • Chemical contaminants
      • Pesticide residues
  23. Homology-based reconstruction of regulatory networks for bacterial and archaeal genomes

    • Frontiers in Microbiology
    • Gene regulation is a key process for all microorganisms, as it allows them to adapt to different environmental stimuli. However, despite the relevance of gene expression control, for only a handful of organisms is there related information about genome regulation. In this work, we inferred the gene regulatory networks (GRNs) of bacterial and archaeal genomes by comparisons with six organisms with well-known regulatory interactions.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  24. The Antimicrobial Activity and Characterization of Bioactive Compounds in Peganum harmala L. Based on HPLC and HS-SPME-GC-MS

    • Frontiers in Microbiology
    • Peganum harmala L. is a perennial herb of the Tribulus family and its aerial parts and seeds can be used as medicine in the traditional medicine of China. However, the differences in chemical components and antibacterial activity between different parts have not been reported. In this study, the chemical composition of the different parts of P.

      • Chemical contaminants
      • Heavy Metals
  25. Comparative Effects of Deoxynivalenol, Zearalenone and Its Modified Forms De-Epoxy-Deoxynivalenol and Hydrolyzed Zearalenone on Boar Semen In Vitro

    • Toxins
    • Deoxynivalenol (DON) and zearalenone (ZEN) are described as detrimental factors to sow and boar fertility. In comparison, literature reports on the impact of modified forms of DON and ZEN, such as de-epoxy-DON (DOM-1) and hydrolyzed ZEN (HZEN), on swine reproduction are scarce. The aim of our study was to compare the effects of DON, DOM-1, ZEN and HZEN on boar semen in vitro.

      • Natural toxins
      • Mycotoxins