An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 11101 - 11125 of 42101

  1. Clostridium botulinum Type B Isolated From a Wound Botulism Case Due to Injection Drug Use Resembles Other Local Strains Originating From Hawaii

    • Frontiers in Microbiology
    • Clostridium botulinum produces botulinum neurotoxin (BoNT), which can lead to death if untreated. In the United States, over 90% of wound botulism cases are associated with injection drug use of black tar heroin. We sought to determine the phylogenetic relatedness of C. botulinum isolated from an injection drug use wound botulism case and isolates from endogenous infant botulism cases in Hawaii. Nineteen C.

      • Clostridium botulinum
      • Bacterial pathogens
  2. L-Arabinose Transport and Metabolism in Salmonella Influences Biofilm Formation

    • Frontiers in Cellular and Infection Microbiology
    • L-arabinose inducible promoters are commonly used in gene expression analysis. However, nutrient source and availability also play a role in biofilm formation; therefore, L-arabinose metabolism could impact biofilm development. In this study we examined the impact of L-arabinose on Salmonella enterica serovar Typhimurium (S. Typhimurium) biofilm formation. Using mutants impaired for the transport and metabolism of L-arabinose, we showed that L-arabinose metabolism negatively impacts S.

      • Salmonella
      • Bacterial pathogens
  3. Vibrio vulnificus induces the death of a major bacterial species in the mouse gut via cyclo-Phe-Pro

    • Microbiome
    • Abstract
      Background

      • Vibrio
      • Bacterial pathogens
  4. Comprehensive Description of Pathogens and Antibiotic Treatment Guidance in Children With Community-Acquired Pneumonia Using Combined Mass Spectrometry Methods

    • Frontiers in Cellular and Infection Microbiology
    • The objective of this study was to evaluate the value of molecular methods in the management of community-acquired pneumonia (CAP) in children. Previously developed mass spectrometry (MS)-based methods combined with quantitative real-time PCR (combined-MS methods) were used to describe the aetiology and evaluate antibiotic therapy in the enrolled children.

  5. Conditional impairment of Coxiella burnetii by glucose-6P dehydrogenase activity

    • Pathogens and Disease
    • ABSTRACT Coxiella burnetii is a bacterial obligate intracellular parasite and the etiological agent of query (Q) fever. While the C. burnetii genome has been reduced to ∼2 Mb as a likely consequence of genome streamlining in response to parasitism, enzymes for a nearly complete central metabolic machinery are encoded by the genome.

      • Bacterial pathogens
  6. The forgotten role of food cultures

    • FEMS Microbiology Letters
    • ABSTRACT Fermentation is one of if not the oldest food processing technique, yet it is still an emerging field when it comes to its numerous mechanisms of action and potential applications. The effect of microbial activity on the taste, bioavailability and preservation of the nutrients and the different food matrices has been deciphered by the insights of molecular microbiology.

  7. Behavior of Salmonella Enteritidis and Shigella flexneri during induction and recovery of the viable but nonculturable state

    • FEMS Microbiology Letters
    • ABSTRACT Bacteria may enter into a viable but nonculturable (VBNC) state as a response to stresses, such as those found in food processing. Cells in the VBNC state lose the ability to grow in a conventional culture medium but man recover culturability. The viability, culturability and intracellular reactive oxygen species (ROS) of Salmonella Enteritidis and Shigella flexneri were evaluated under stress conditions to induce a VBNC state.

      • Salmonella
      • Shigella
      • Bacterial pathogens
  8. Distribution and molecular characterization of ESBL, pAmpC β-lactamases, and non-β-lactam encoding genes in Enterobacteriaceae isolated from hospital wastewater in Eastern Cape Province, South Africa

    • PLOS ONE
    • by Folake Temitope Fadare, Anthony Ifeanyi Okoh

      • Bacterial pathogens
  9. CBS-derived H2S facilitates host colonization of Vibrio cholerae by promoting the iron-dependent catalase activity of KatB

    • PLOS Pathogens
    • by Yao Ma, Xiaoman Yang, Hongou Wang, Zixin Qin, Chunrong Yi, Changping Shi, Mei Luo, Guozhong Chen, Jin Yan, Xiaoyun Liu, Zhi Liu

      • Vibrio
      • Bacterial pathogens
  10. Seroprevalence of brucellosis and Q fever infections amongst pastoralists and their cattle herds in Sokoto State, Nigeria

    • PLOS ONE
    • by Simeon Cadmus, Samson Polycarp Salam, Hezekiah Kehinde Adesokan, Kelechi Akporube, Fiyinfoluwa Ola-Daniel, Emmanuel Jolaoluwa Awosanya

      • Bacterial pathogens
  11. Sequential bioethanol and biogas production coupled with heavy metal removal using dry seaweeds: Towards enhanced economic feasibility

    • Journal of Cleaner Production
    • Author(s): Abd El-Fatah Abomohra, Mohamed E. El-Hefnawy, Qingyuan Wang, Jin Huang, Li Li, Jialing Tang, Soha Mohammed

  12. A near-zero-waste approach using simple physical-chemical methods recovery high concentrations of ammonia nitrogen, heavy metal, and sodium salts from hazardous vanadium-extracted solution

    • Journal of Cleaner Production
    • Author(s): Suying Zhou, Mengge Dong, Xueyong Ding, Xiangxin Xue, He Yang, Xuefei Zhang

  13. New Determination Methods, Toxic Mechanisms, and Control Strategies (Preface to the special issue of Food and Chemical Toxicology on the Outcomes of Mycotoxins in Food)

    • Food and Chemical Toxicology
    • Author(s): Ying Deng, Qinghua Wu, Wenda Wu, Kamil Kuca

  14. Probabilistic-fuzzy risk assessment and source analysis of heavy metals in soil considering uncertainty: A case study of Jinling Reservoir in China

    • Ecotoxicology and Environmental Safety
    • Author(s): Xuedong Wang, Chaobiao Zhang, Cui Wang, Yongdong Zhu, Yunhao Cui

  15. On the phytoscreening potential of insect-induced plant galls

    • Plant and Soil
    • Abstract


  16. Antidepressant-Like Properties of Intrastriatal Botulinum Neurotoxin-A Injection in a Unilateral 6-OHDA Rat Model of Parkinson’s Disease

    • Toxins
    • Parkinson’s patients often suffer from depression and anxiety, for which there are no optimal treatments. Hemiparkinsonian (hemi-PD) rats were used to test whether intrastriatal Botulinum neurotoxin-A (BoNT-A) application could also have antidepressant-like properties in addition to the known improvement of motor performance.

      • Clostridium botulinum
      • Bacterial pathogens
  17. Nationwide Assessment of Water Quality in Rivers Across Lebanon by Quantifying Fecal Indicators Densities and Profiling Antibiotic Resistance of Escherichia coli

    • Antibiotics
    • The use of contaminated water has been associated with severe disease outbreaks. Due to widespread pollution with untreated sewage, concerns have been raised over water quality in Lebanon, a country with well-documented challenges in infrastructure. Here, we evaluated the water quality of major rivers in Lebanon by quantifying the densities of fecal indicator bacteria (fecal coliforms and Escherichia coli). Additionally, we assessed the dissemination of antibiotic-resistant E.

      • Bacterial pathogens
  18. High Prevalence of ESBL and Plasmid-Mediated Quinolone Resistance Genes in Salmonella enterica Isolated from Retail Meats and Slaughterhouses in Egypt

    • Antibiotics
    • The emergence and spread of multidrug-resistant Salmonella enterica (S. enterica) to humans through food of animal origin are considered a major global public health concern. Currently, little is known about the prevalence of important antimicrobial resistance genes in S. enterica from retail food in Africa. Therefore, the screening and characterization of the extended-spectrum β-lactamase (ESBL) and plasmid-mediated quinolone resistance (PMQR) genes in S.

      • Salmonella
      • Bacterial pathogens
  19. Development of a High-Efficiency Immunomagnetic Enrichment Method for Detection of Human Norovirus via PAMAM Dendrimer/SA-Biotin Mediated Cascade-Amplification

    • Frontiers in Microbiology
    • Human norovirus is a common cause of acute gastroenteritis worldwide, and oysters have been found to be the main carriers for its spread. The lack of efficient pre-treatment methods has been a major bottleneck limiting the detection of viruses in oysters.

      • Norovirus
      • Viruses
  20. Genomic Landscape and Phenotypic Assessment of Cronobacter sakazakii Isolated From Raw Material, Environment, and Production Facilities in Powdered Infant Formula Factories in China

    • Frontiers in Microbiology
    • Cronobacter is a foodborne pathogen associated with severe infections and high mortality in neonates. The bacterium may also cause gastroenteritis, septicemia, and urinary tract and wound infectious in adults.

      • Cronobacter
      • Bacterial pathogens
  21. Prevalence and Characteristic of Swine-Origin mcr-1-Positive Escherichia coli in Northeastern China

    • Frontiers in Microbiology
    • The emergence of the plasmid-mediated colistin resistance gene mcr-1 is threatening the last-line role of colistin in human medicine. With mcr-1-positive Escherichia coli (E. coli) isolated from food animal being frequently reported in China, the prevalence of mcr-1 in food animal has attracted public attention. In the present study, a total of 105 colistin-resistant E. coli strains were isolated from 200 fecal samples collected from six swine farms in northeastern China.

      • Bacterial pathogens
  22. Emergence and Clonal Spread of CTX-M-65-Producing Escherichia coli From Retail Meat in Portugal

    • Frontiers in Microbiology
    • The emergence and dissemination of resistance to third- and fourth-generation cephalosporins among Enterobacteriaceae from different sources impose a global public health threat. Here, we characterized by whole-genome sequencing four Escherichia coli strains harboring the blaCTX–M–65 gene identified among 49 isolates from beef and pork collected at retail. The genomic content was determined using the Center for Genomic Epidemiology web tools.

      • Bacterial pathogens
  23. Acquisition of a Stable and Transferable blaNDM-5-Positive Plasmid With Low Fitness Cost Leading to Ceftazidime/Avibactam Resistance in KPC-2-Producing Klebsiella pneumoniae During Treatment

    • Frontiers in Cellular and Infection Microbiology
    • The emergence and prevalence of carbapenem-resistant Enterobacteriaceae (CRE) have drawn worldwide attention. Ceftazidime/avibactam (CAZ/AVI) gives us a valuable alternative strategy to treat CRE infections. Unfortunately, CAZ/AVI resistance could occur during CAZ/AVI treatment.

      • Bacterial pathogens
  24. Using Plate-Wash PCR and High-Throughput Sequencing to Measure Cultivated Diversity for Natural Product Discovery Efforts

    • Frontiers in Microbiology
    • Molecular techniques continue to reveal a growing disparity between the immense diversity of microbial life and the small proportion that is in pure culture. The disparity, originally dubbed “the great plate count anomaly” by Staley and Konopka, has become even more vexing given our increased understanding of the importance of microbiomes to a host and the role of microorganisms in the vital biogeochemical functions of our biosphere.

  25. Characteristics of Antimicrobial-Resistant Vibrio parahaemolyticus Strains and Identification of Related Antimicrobial Resistance Gene Mutations

    • Foodborne Pathogens and Disease
    • Multidrug-resistant (MDR) Vibrio parahaemolyticus strains have become a great threat to public health. The purpose of this study was to investigate differences in biological characteristics and antimicrobial resistance gene (ARG) mutations of V. parahaemolyticus that displayed different levels of antimicrobial resistance. The susceptibility of 74 V.

      • Vibrio
      • Bacterial pathogens