An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 5276 - 5300 of 42078

  1. Antibiofilm mechanism of a novel milk‐derived antimicrobial peptide against Staphylococcus aureus by down regulating agr quorum sensing system

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aims Staphylococcus aureus has emerged as a serious threat to food safety owing to biofilm formation. The study aimed to examine antibiofilm mechanism of a novel milk-derived antimicrobial peptide BCp12 against it. Methods and results Anti-biofilm activity of BCp12 was studied by crystal violet staining, MTT assay, motility, SEM and CLSM.

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Complete genome sequences and genomic characterization of five plasmids harbored by environmentally persistent Cronobacter sakazakii strains ST83 H322 and ST64 GK1025B obtained from powdered infant formula manufacturing facilities

    • Gut Pathogens
    • Background Cronobacter sakazakii is a foodborne pathogen that causes septicemia, meningitis, and necrotizing enterocolitis in neonates and infants. The current research details the full genome sequences of two extremely persistent C. sakazakii strains (H322 and GK1025B) isolated from powdered infant formula (PIF) manufacturing settings.

      • Bacterial pathogens
      • Cronobacter
  3. Modeling the growth of Salmonella on sliced cucumbers as a function of temperature and relative humidity

    • Recent multistate outbreaks of salmonellosis linked to fresh cucumbers underscore the importance of understanding Salmonella behavior on cucumbers under different storage conditions. No validated models which describe the impact of environmental factors on growth of Salmonella on sliced cucumbers currently exist. This study developed mathematical models to predict the growth of Salmonella on sliced cucumbers at different temperature and relative humidity (RH) conditions.

      • Bacterial pathogens
      • Salmonella
  4. Listeria monocytogenes outbreaks related to commercially produced caramel apples: Developments in sanitation, product formulation, and packaging

    • Prior to a deadly 2014 listeriosis outbreak, caramel apples were not thought to be vehicles for the foodborne pathogen Listeria monocytogenes. The purpose of this review article is to summarize what has been learned from research prompted by this outbreak. An overview of the two L. monocytogenes outbreaks related to prepackaged caramel apples, along with a brief discussion of apple sanitation and the production processes used to make caramel apples, is provided.

      • Bacterial pathogens
      • Listeria monocytogenes
  5. Vitamin D-mediated effects on airway innate immunity in vitro

    • PLOS ONE
    • by Emma M. Stapleton, Kathy Keck, Robert Windisch, Mallory R. Stroik, Andrew L. Thurman, Joseph Zabner, Ian M. Thornell, Alejandro A. Pezzulo, Julia Klesney-Tait, Alejandro P. Comellas Introduction Vitamin D supplementation has been suggested to enhance immunity during respiratory infection season.

      • Bacterial pathogens
      • Staphylococcus aureus
  6. Identification of Two Sel1-like Proteins in SPI-19 of Salmonella enterica Serovar Pullorum That Can Mediate Bacterial Infection Through T3SS

    • Microbiological Research
    • The type VI secretion system (T6SS) encoded by Salmonella Pathogenicity Island 19 (SPI-19) has been confirmed to be involved in bacterial infection or colonization in hosts and in the inhibition of the host T-cell immune response. However, the deletion of the core genes (clpVvgrG, and hcp2) encoding the T6SS apparatus does not affect the phenotypes caused by SPI-19-encoded T6SS.

      • Bacterial pathogens
      • Salmonella
  7. Antidotal effect of cyclosporine A against α-amanitin toxicity in CD-1 mice, at clinical relevant doses

    • Food and Chemical Toxicology
    • Amanita phalloides is one of the most toxic mushrooms worldwide, being responsible for the majority of human fatal cases of mushroom intoxications. α-Amanitin, the most deleterious toxin of A. phalloides, inhibits RNA polymerase II (RNAP II), causing hepatic and renal failure. Herein, we used cyclosporine A that showed potential to displace RNAP II α-amanitin in silico.

      • Natural toxins
      • Mycotoxins
  8. Inhibitory effect of a new bacteriocin RSQ04 purified from Lactococcus lactis on Listeria monocytogenes and its application on model food systems

    • LWT
    • Listeria monocytogenes and its biofilms can constitute a severe threat to public health. RSQ04 is a novel bacteriocin produced by Lactococcus lactis CGMCC20699 against L. monocytogenes ATCC 19115.

      • Bacterial pathogens
      • Listeria monocytogenes
  9. Gut Microbiome Signatures in the Progression of Hepatitis B Virus-Induced Liver Disease

    • Frontiers in Microbiology
    • The gut microbiome is associated with hepatitis B virus (HBV)-induced liver disease, which progresses from chronic hepatitis B, to liver cirrhosis, and eventually to hepatocellular carcinoma. Studies have analyzed the gut microbiome at each stage of HBV-induced liver diseases, but a consensus has not been reached on the microbial signatures across these stages.

      • Viruses
      • Hepatitis
  10. In vitro and in silico Studies Reveal Bacillus cereus AA-18 as a Potential Candidate for Bioremediation of Mercury-Contaminated Wastewater

    • Frontiers in Microbiology
    • Mercury (Hg) pollution is a worldwide problem and increasing day by day due to natural and anthropogenic sources. In this study, mercury-resistant (HgR) bacterial isolates were isolated from industrial wastewater of Ittehad Chemicals Ltd., Kala Shah Kaku, Lahore, Pakistan. Out of 65 bacterial isolates, five isolates were screened out based on showing resistance at 30–40 μg/ml against HgCl2.

      • Bacterial pathogens
      • Bacillus cereus
  11. Complete Genome Sequence of a Listeria monocytogenes Strain Isolated from Sprouts and Carrying an Antimicrobial Resistance Gene

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Listeria monocytogenes, a Gram-positive, rod-shaped, non-spore-forming bacterium, is an important foodborne bacterial pathogen for humans worldwide, with a high mortality rate. Here, we report the complete genome sequence of a Listeria monocytogenes strain with an antimicrobial resistance (AMR) gene, isolated from sprouts in Canada.

      • Bacterial pathogens
      • Listeria monocytogenes
  12. Complete Genome Sequences of Three Listeria monocytogenes Strains from Microgreens Obtained with MinION and MiSeq Sequencing

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Listeria monocytogenes is a Gram-positive, rod-shaped, non-spore-forming bacterium which is an important foodborne bacterial pathogen for human worldwide with 20-30% mortality. Here, we report circular complete genome sequences of three Listeria monocytogenes strains isolated from the samples of microgreens in Canada.

      • Bacterial pathogens
      • Listeria monocytogenes
  13. Complete Genome Sequence of a Listeria monocytogenes Strain with Antimicrobial Resistance Genes Isolated from Lettuce in Canada

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Listeria monocytogenes, a Gram-positive, rod-shaped, non-spore-forming bacterium, is an important foodborne bacterial pathogen for humans worldwide. Here, we report the complete genome sequence of a Canadian Listeria monocytogenes strain with an antimicrobial resistance (AMR) gene that was isolated from lettuce.

      • Bacterial pathogens
      • Listeria monocytogenes
  14. Integration of the Salmonella Typhimurium Methylome and Transcriptome Reveals That DNA Methylation and Transcriptional Regulation Are Largely Decoupled under Virulence-Related Conditions

    • mBio
    • mBio, Ahead of Print. Despite being in a golden age of bacterial epigenomics, little work has systematically examined the plasticity and functional impacts of the bacterial DNA methylome.

      • Bacterial pathogens
      • Salmonella
  15. Toxoplasma gondii Infection Decreases Intestinal 5-Lipoxygenase Expression, while Exogenous LTB4 Controls Parasite Growth

    • Infection and Immunity
    • Infection and Immunity, Ahead of Print. 5-Lipoxygenase (5-LO) is an enzyme required for the production of leukotrienes and lipoxins and interferes with parasitic infections. In vitro, Toxoplasma gondii inhibits leukotriene B4 (LTB4) production, and mice deficient in 5-LO are highly susceptible to infection.

      • Parasites
      • Toxoplasma gondii
  16. Salmonella Central Carbon Metabolism Enhances Bactericidal Killing by Fluoroquinolone Antibiotics

    • Antimicrobial Agents and Chemotherapy
    • Antimicrobial Agents and Chemotherapy, Ahead of Print. The efficacy of killing by bactericidal antibiotics has been reported to depend in large part on the ATP levels, with low levels of ATP leading to increased persistence after antibiotic challenge.

      • Bacterial pathogens
      • Salmonella
  17. Recycling of arsenic-containing biohydrometallurgy waste to produce a binder for cemented paste backfill: Influence of additives

    • Journal of Cleaner Production
    • Biohydrometallurgy waste (BW) was used as sulfate sources for supersulfated cement (SSC) production with the aim of providing an alternative binder for cemented paste backfill (CPB).

      • Chemical contaminants
      • Heavy Metals
  18. Exploring communication signals inside the microbial community of a Listeria monocytogenes-carrying biofilm contamination site

    • International Journal of Food Microbiology
    • In nature, bacterial pathogens like L. monocytogenes, live in nature associated with other microbial species in spatially-structured communities called biofilms. In the food industry, biofilms contribute to the survival and persistence of L. monocytogenes within processing facilities, thereby enhancing its risk of cross-contaminating food products.

      • Bacterial pathogens
      • Listeria monocytogenes
  19. Prevalence and whole-genome sequencing analysis of Salmonella reveal its spread along the duck production chain

    • Poultry Science
    • Salmonella is the most important foodborne pathogen in poultry production systems and can infect humans via consumption of contaminated food. Ducks, an important waterfowl widely raised in China, are also a vehicle that transmits Salmonella through the food supply chain.

      • Bacterial pathogens
      • Salmonella
  20. Gene essentiality profiling reveals a novel determinant of stresses preventing protein aggregation in Salmonella

    • Emerging Microbes & Infections
    • Adaptation to various stresses during infection is important for Salmonella Typhimurium virulence, while the fitness determinants under infection-relevant stress conditions remain unknown. Here, we simulated conditions Salmonella encountered within the host or in the environment by 15 individual stresses as well as two model cell lines (epithelium and macrophage) to decipher the genes and pathways required for fitness.

      • Bacterial pathogens
      • Salmonella
  21. Identification of Reference Genes for Reverse Transcription-Quantitative PCR Analysis of Ginger Under Abiotic Stress and for Postharvest Biology Studies

    • Frontiers in Plant Science
    • Gene expression analysis largely improves our understanding of the molecular basis underpinning various plant biological processes. Stable reference genes play a foundational role during the normalization of gene expression levels. However, until now, there have been few reference genes suitable for ginger reverse transcription-quantitative PCR (RT-qPCR) research.

      • Produce Safety
      • Post Harvest
  22. Repurposing the Sphingosine-1-Phosphate Receptor Modulator Etrasimod as an Antibacterial Agent Against Gram-Positive Bacteria

    • Frontiers in Microbiology
    • New classes of antibiotics are urgently needed in the fight against multidrug-resistant bacteria. Drug repurposing has emerged as an alternative approach to accelerate antimicrobial research and development. In this study, we screened a library of sphingosine-1-phosphate receptor (S1PR) modulators against Staphylococcus aureus and identified five active compounds.

      • Bacterial pathogens
      • Staphylococcus aureus
  23. Cross-Talk Between the Intestinal Epithelium and Salmonella Typhimurium

    • Frontiers in Microbiology
    • Salmonella enterica serovars are invasive gram-negative bacteria, causing a wide range of diseases from gastroenteritis to typhoid fever, representing a public health threat around the world. Salmonella gains access to the intestinal lumen after oral ingestion of contaminated food or water. The crucial initial step to establish infection is the interaction with the intestinal epithelium. Human-adapted serovars such as S. Typhi or S.

      • Bacterial pathogens
      • Salmonella
  24. Identification of Crucial Amino Acid Residues for Antimicrobial Activity of Angiogenin 4 and Its Modulation of Gut Microbiota in Mice

    • Frontiers in Microbiology
    • Angiogenin 4 bearing ribonuclease activity is an endogenous antimicrobial protein expressed in small and large intestine. However, the crucial amino acid residues responsible for the antibacterial activity of Ang4 and its impact on gut microbiota remain unknown. Here, we report the contribution of critical amino acid residues in the functional regions of Ang4 to its activity against Salmonella typhimurium LT2 and the effect of Ang4 on gut microbiota in mice. We found that Ang4 binds S.

      • Bacterial pathogens
      • Salmonella
  25. Evaluation of various clean-up sorbents in kale followed by LC-MS/MS analysis of pesticides

    • Food Science and Biotechnology
    • Chlorophyll-rich samples, such as kale, interfere with the analysis of residual pesticides and adversely affect the integrity of tandem mass spectrometers. Dispersed solid-phase (d-SPE) extraction using graphitized carbon black effectively removes pigments from kale extracts; however, it also reduces the recoveries of 30 pesticides. To overcome this, alternative sorbents, including ENVI-Carb, ChloroFiltr, and Z-Sep+, were evaluated in this study.

      • Chemical contaminants
      • Pesticide residues