An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 6676 - 6700 of 42078

  1. Screening of active sites and study on immobilization of Bacillus cereus phospholipase C

    • LWT
    • Bacillus cereus phospholipase C (PLCBC) was obtained by treating Bacillus cereus with ultraviolet light and diethyl sulfate. The active centers of PLCBC were determined, and its inactive center groups were combined with the carboxyl modified carrier to obtain immobilized PLCBC. The enzyme activity was 289 U/mg. The active group of the enzyme was –COOH, while the binding site was –NH2. The –COOH and –NH2 of PLCBC were chemically modified.

      • Bacterial pathogens
      • Bacillus cereus
  2. Overview of Witloof Chicory (Cichorium intybus L.) Discolorations and Their Underlying Physiological and Biochemical Causes

    • Frontiers in Plant Science
    • Many fruits and vegetables suffer from unwanted discolorations that reduce product quality, leading to substantial losses along the supply chain. Witloof chicory (Cichorium intybus L. var. foliosum), a specialty crop characterized by its unique bitter taste and crunchiness, is particularly sensitive to various types of red and brown discolorations. The etiolated vegetable suffers from three predominant color disorders, i.e., core browning, internal leaf reddening, and leaf edge browning.

      • Produce Safety
      • Post Harvest
  3. Feeding Bacillus subtilis ATCC19659 to Broiler Chickens Enhances Growth Performance and Immune Function by Modulating Intestinal Morphology and Cecum Microbiota

    • Frontiers in Microbiology
    • This study investigated dietary supplementation with Bacillus subtilis (BS) ATCC19659 on growth performance, biochemical indices, intestinal morphology, and cecum microflora in broiler chicks.

      • Bacterial pathogens
      • Shigella
  4. Benzalkonium Chloride Adaptation Increases Expression of the Agr System, Biofilm Formation, and Virulence in Listeria monocytogenes

    • Frontiers in Microbiology
    • Benzalkonium chloride (BC) is widely used for disinfection in food industry. However, prolonged exposure to BC may lead to the emergence of BC adapted strains of Listeria monocytogenes, an important foodborne pathogen. Until now, two communication systems, the LuxS/AI-2 system and the Agr system, have been identified in L. monocytogenes.

      • Bacterial pathogens
      • Listeria monocytogenes
  5. Non-thermal plasma induces changes in aflatoxin production, devitalization, and surface chemistry of Aspergillus parasiticus

    • Applied Microbiology and Biotechnology
    • Non-thermal plasma (NTP) represents the fourth state of matter composed of neutral molecules, atoms, ions, radicals, and electrons. It has been used by various industries for several decades, but only recently NTPs have emerged in fields such as medicine, agriculture, and the food industry. In this work, we studied the effect of NTP exposure on aflatoxin production, conidial germination and mycelial vitality, morphological and surface changes of conidia and mycelium.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  6. Detection of capsular genotypes of methicillin-resistant Staphylococcus aureus and clonal distribution of the cap5 and cap8 genes in clinical isolates

    • Archives of Microbiology
    • Up until now, the capsular polysaccharides of Staphylococcus aureus have been classified into 11 types, of which only 2 types 5 and 8; (encoded by the genes cap5 and cap8, respectively) are present in 80–90% of clinically significant strains. The aim of the present study was to detect the capsular genotypes of methicillin-resistant S. aureus (MRSA) clinical isolates and determined their clonal distribution.

      • Bacterial pathogens
      • Staphylococcus aureus
  7. Isolation and molecular identification of native As-resistant bacteria: As(III) and As(V) removal capacity and possible mechanism of detoxification

    • Archives of Microbiology
    • The study of arsenic (As)-resistant microorganisms with high As removal capacity is fundamental for the development of economically sustainable technologies used for the treatment of water contaminated with metalloid. In the current study, four bacterial strains were isolated from As-contaminated water samples of the Xichu region, Mexico.

      • Chemical contaminants
      • Heavy Metals
  8. Duration of Induced Metallothionein is a Critical Factor in the Cadmium-Resistance Among Goldfish (Carassius auratus) and Common Carp (Cyprinus carpio)

    • Bulletin of Environmental Contamination and Toxicology
    • According to the Environmental Protection Agency in Taiwan, the common carp (Cyprinus carpio) is one species of fish for acute toxic test. It has been found to be extremely sensitive to the toxicity of Cd2+; Furthermore, the goldfish (Carassius auratus) has a higher resistance than common carp upon Cd2+ exposure, but both fish are the same family.

      • Chemical contaminants
      • Heavy Metals
  9. Antinociceptive Actions of Botulinum Toxin A1 on Immunogenic Hypersensitivity in Temporomandibular Joint of Rats

    • Toxins
    • Botulinum neurotoxin type A1 (BoNT-A) reduces the peripheral peptide and cytokine upregulation in rats with antigen-evoked persistent immunogenic hypersensitivity (PIH) of the temporomandibular joint (TMJ). Herein, we examined the effects of two preparations of BoNT-A, abobotulinumtoxinA (aboBoNT-A; Dysport) and onabotulinumtoxinA (onaBoNT-A; Botox), on spontaneous and evoked nociceptive behaviors, as well as on central neuronal and astroglial activation.

      • Bacterial pathogens
      • Clostridium botulinum
  10. Assessing the Validity of Normalizing Aflatoxin B1-Lysine Albumin Adduct Biomarker Measurements to Total Serum Albumin Concentration across Multiple Human Population Studies

    • Toxins
    • The assessment of aflatoxin B1 (AFB1) exposure using isotope-dilution liquid chromatography-mass spectrometry (LCMS) of AFB1-lysine adducts in human serum albumin (HSA) has proven to be a highly productive strategy for the biomonitoring of AFB1 exposure.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  11. Rapidly Progressing to ESRD in an Individual with Coexisting ADPKD and Masked Klinefelter and Gitelman Syndromes

    • Genes
    • Autosomal dominant polycystic kidney disease (ADPKD) is the most common monogenetic hereditary renal disease, promoting end-stage renal disease (ESRD). Klinefelter syndrome (KS) is a consequence of an extra copy of the X chromosome in males. Main symptoms in KS include hypogonadism, tall stature, azoospermia, and a risk of cardiovascular diseases, among others.

      • Chemical contaminants
      • Heavy Metals
  12. Successful Silencing of the Mycotoxin Synthesis Gene TRI5 in Fusarium culmorum and Observation of Reduced Virulence in VIGS and SIGS Experiments

    • Genes
    • Crops constantly experience various biotic stresses during their life cycle, and Fusarium spp. remain one of the most serious groups of pathogens affecting plants. The ability to manipulate the expression of certain microorganism genes via RNAi creates the opportunity for new-generation dsRNA-based preparations to control a large number of diseases.

      • Natural toxins
      • Mycotoxins
  13. In Vitro Screening of a 1280 FDA-Approved Drugs Library against Multidrug-Resistant and Extensively Drug-Resistant Bacteria

    • Antibiotics
    • Alternative strategies against multidrug-resistant (MDR) bacterial infections are suggested to clinicians, such as drug repurposing, which uses rapidly available and marketed drugs. We gathered a collection of MDR bacteria from our hospital and performed a phenotypic high-throughput screening with a 1280 FDA-approved drug library.

      • Bacterial pathogens
      • Staphylococcus aureus
  14. Agent‐based simulation of cross‐contamination of Escherichia coli O157:H7 on lettuce during processing and temperature fluctuations during storage in a produce facility. Part 2: Model implementation

    • Journal of Food Process Engineering
    • Journal of Food Process Engineering, EarlyView. An agent-based simulation was developed to represent the spatial and temporal Escherichia coli O157:H7 cross-contamination dynamics in a processing facility for fresh-cut romaine lettuces using NetLogo. An extension was added to the model to predict E. coli O157:H7 growth due to temperature abuses in a cold storage facility. A user-friendly interface was created to follow variations in model outputs.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  15. Emerging Issues and Potential Opportunities in the Rice–Wheat Cropping System of North-Western India

    • Frontiers in Plant Science
    • The rice–wheat cropping system (RWCS) is the backbone of Indian farming, especially in the north-western region. But continuous adoption of the RWCS in northwest India has resulted in major challenges and stagnation in the productivity of this system. Additionally, the Indo-Gangetic Plains of Pakistan, Nepal, and Bangladesh are also facing similar challenges for sustainable production of the RWCS.

      • Chemical contaminants
      • Pesticide residues
  16. Assessing the Impact of Diet on the Mucosa-Adhered Microbiome in Piglets Using Comparative Analysis of Rectal Swabs and Colon Content

    • Frontiers in Microbiology
    • Previously, we demonstrated that rectal swabs provide a legitimate alternative to faecal sampling for the assessment of the intestinal microbiota in young piglets. However, we also reported that mucosa-adhered microbial populations were more represented in rectal swabs compared to faecal samples, albeit to a degree that varied per swab-sample.

      • Bacterial pathogens
      • Shigella
  17. Characteristics of Antibiotic Resistance Genes and Antibiotic-Resistant Bacteria in Full-Scale Drinking Water Treatment System Using Metagenomics and Culturing

    • Frontiers in Microbiology
    • The contamination of antibiotic resistance genes (ARGs) may directly threaten human health. This study used a metagenomic approach to investigate the ARG profile in a drinking water treatment system (DWTS) in south China. In total, 317 ARG subtypes were detected; specifically, genes encoding bacitracin, multidrug, and sulfonamide were widely detected in the DWTS.

      • Bacterial pathogens
      • Bacillus cereus
  18. Effect of Early Pathogenic Escherichia coli Infection on the Intestinal Barrier and Immune Function in Newborn Calves

    • Frontiers in Cellular and Infection Microbiology
    • We studied the effect of early pathogenic Escherichia coli infection on newborn calves’ intestinal barrier and immune function. A total of 64 newborn Holstein male calves (40–43 kg) were divided into two groups: normal (NG) and test (TG), each with 32 heads. At the beginning of the experiment, the TG calves were orally administered pathogenic E. coli O1 (2.5 × 1011 CFU/mL, 100 mL) to establish a calf diarrhea model. In contrast, the NG calves were given the same amount of normal saline.

      • Bacterial pathogens
      • Shigella
  19. Comparative Genomic Reveals Clonal Heterogeneity in Persistent Staphylococcus aureus Infection

    • Frontiers in Cellular and Infection Microbiology
    • Persistent infections caused by Staphylococcus aureus remain a clinical challenge. Adaptational mechanisms of the pathogen influencing infection persistence, treatment success, and clinical outcome in these types of infections by S. aureus have not been fully elucidated so far. We applied a whole-genome sequencing approach on fifteen isolates retrieved from a persistent S. aureus infection to determine their genetic relatedness, virulome, and resistome.

      • Bacterial pathogens
      • Staphylococcus aureus
  20. Antimicrobial Compounds from Microorganisms

    • Antibiotics
    • Antimicrobial resistance is an exigent public health concern owing to the emergence of novel strains of human resistant pathogens and the concurrent rise in multi-drug resistance. An influx of new antimicrobials is urgently required to improve the treatment outcomes of infectious diseases and save lives.

      • Chemical contaminants
      • Heavy Metals
  21. Intravenous Drug Use: a Significant Risk Factor for Serratia Bacteremia

    • Therapeutic Advances in Infectious Disease
    • Background:Serratia is an opportunistic pathogen known to cause an array of infectious presentations. Aside from case reports, intravenous (IV) drug use has not been adequately quantified as a major risk factor for Serratia infection.Methods:A retrospective cohort study of 103 adult patients admitted to four community hospitals in Ohio from January 2014 to December 2018 with a positive blood culture for Serratia species.

      • Viruses
      • Hepatitis
  22. Impact of farm‐level strategies against thermotolerant Campylobacter in broiler chickens, using a quantitative risk assessment model and meta‐analysis

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. The aim of this study was to evaluate the effect of control strategies (probiotic supplementation and vaccination) at farm on thermotolerant Campylobacter infection due to the consumption of salad cross-contaminated from broiler meat. The broiler food chain was modelled considering the most common practices applied in Argentina (baseline model) and their effect on the prevalence and counts of Campylobacter.

      • Bacterial pathogens
      • Campylobacter
  23. Occult Hepatitis B virus (HBV) infection and challenges for hepatitis elimination: A literature review

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 1616-1635, March 2022. Occult hepatitis B infection (OBI) is characterized by the detection of hepatitis B virus (HBV) DNA in serum or liver but negativity for hepatitis B surface antigen. OBI, which is thought to be maintained by host, immunological, viral and/or epigenetic factors, is one of the most challenging clinical features in the study of viral hepatitis. Currently, there is no validated detection test for OBI.

      • Viruses
      • Hepatitis
  24. Detection of virulence and extended spectrum β‐lactamase genes in Salmonella by multiplex high‐resolution melt curve real‐time PCR assay

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 2355-2367, March 2022. Aims Develop and standardize multiplex high-resolution melt curve (HRM) real-time PCR assays for simultaneous detection of Salmonella virulence and extended spectrum β-lactamase (ESBL) genes in food. Methods and Results Two sets of multiplex real-time PCR assays targeting six virulence and three ESBL genes with internal amplification control were standardized.

      • Bacterial pathogens
      • Salmonella
  25. Anaerobic soil disinfestation, amendment‐type, and irrigation regimen influence Salmonella survival and die‐off in agricultural soils

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 3, Page 2342-2354, March 2022. Aims This study investigated Salmonella concentrations following combinations of horticultural practices including anaerobic soil disinfestation (ASD), soil amendment type and irrigation regimen. Methods and Results Sandy-loam soil was inoculated with a five-serovar Salmonella cocktail (5.5 ± 0.2 log CFU per gram) and subjected to one of si

      • Bacterial pathogens
      • Salmonella